RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 SNRPA1P09661 255 aaKnown RBP9.76□□□□□ -0.85
SMG6-205ENST00000570659 PRKAR2BP31323 418 aa9.76□□□□□ -0.85
SMG6-205ENST00000570659 FXR1P51114 621 aaKnown RBP eCLIP9.76□□□□□ -0.85
SMG6-205ENST00000570659 CDC37L1Q7L3B6 337 aa9.76□□□□□ -0.85
SMG6-205ENST00000570659 LRP10Q7Z4F1 713 aa9.76□□□□□ -0.85
SMG6-205ENST00000570659 CTU1Q7Z7A3 348 aaKnown RBP9.76□□□□□ -0.85
SMG6-205ENST00000570659 RASAL3Q86YV0 1011 aa9.76□□□□□ -0.85
SMG6-205ENST00000570659 ZNF34Q8IZ26 560 aa9.76□□□□□ -0.85
SMG6-205ENST00000570659 RPGRQ92834 1020 aaKnown RBP9.76□□□□□ -0.85
SMG6-205ENST00000570659 CRAMP1Q96RY5 1269 aa9.76□□□□□ -0.85
SMG6-205ENST00000570659 GBA2Q9HCG7 927 aaPredicted RBP9.76□□□□□ -0.85
SMG6-205ENST00000570659 ZNF652Q9Y2D9 606 aa9.76□□□□□ -0.85
SMG6-205ENST00000570659 ATP6V0A2Q9Y487 856 aa9.76□□□□□ -0.85
SMG6-205ENST00000570659 PAPPA2Q9BXP8 1791 aa9.75□□□□□ -0.85
SMG6-205ENST00000570659 PSMD14O00487 310 aa9.75□□□□□ -0.85
SMG6-205ENST00000570659 KIAA2012Q0VF49 1180 aa9.75□□□□□ -0.85
SMG6-205ENST00000570659 RBM26Q5T8P6 1007 aaKnown RBP9.75□□□□□ -0.85
SMG6-205ENST00000570659 ZNF296Q8WUU4 475 aaPredicted RBP9.75□□□□□ -0.85
SMG6-205ENST00000570659 THUMPD2Q9BTF0 503 aaKnown RBP9.75□□□□□ -0.85
SMG6-205ENST00000570659 SAGE1Q9NXZ1 904 aa9.75□□□□□ -0.85
SMG6-205ENST00000570659 MAP3K15Q6ZN16 1313 aa9.75□□□□□ -0.85
SMG6-205ENST00000570659 DDX60Q8IY21 1712 aaKnown RBP9.74□□□□□ -0.85
SMG6-205ENST00000570659 ANKRD36CQ5JPF3 1778 aa9.74□□□□□ -0.85
SMG6-205ENST00000570659 ANXA1P04083 346 aa9.74□□□□□ -0.85
SMG6-205ENST00000570659 GTF2E1P29083 439 aaPredicted RBP9.74□□□□□ -0.85
SMG6-205ENST00000570659 ZNF157P51786 506 aaPredicted RBP9.74□□□□□ -0.85
SMG6-205ENST00000570659 PROSER3Q2NL68 480 aa9.74□□□□□ -0.85
SMG6-205ENST00000570659 CC2D2BQ6DHV5 1058 aa9.74□□□□□ -0.85
SMG6-205ENST00000570659 KRT26Q7Z3Y9 468 aa9.74□□□□□ -0.85
SMG6-205ENST00000570659 KNSTRNQ9Y448 316 aa9.74□□□□□ -0.85
SMG6-205ENST00000570659 DLG5Q8TDM6 1919 aa9.74□□□□□ -0.85
SMG6-205ENST00000570659 ZNF646O15015 1829 aaPredicted RBP9.73□□□□□ -0.85
SMG6-205ENST00000570659 HCLS1P14317 486 aaPredicted RBP9.73□□□□□ -0.85
SMG6-205ENST00000570659 MYL6BP14649 208 aa9.73□□□□□ -0.85
SMG6-205ENST00000570659 PRAMEF18Q5VWM3 479 aa9.73□□□□□ -0.85
SMG6-205ENST00000570659 GAS2L2Q8NHY3 880 aa9.73□□□□□ -0.85
SMG6-205ENST00000570659 ZC3H15Q8WU90 426 aaKnown RBP9.73□□□□□ -0.85
SMG6-205ENST00000570659 RBM17Q96I25 401 aaKnown RBP9.73□□□□□ -0.85
SMG6-205ENST00000570659 BCL2L13Q9BXK5 485 aa9.73□□□□□ -0.85
SMG6-205ENST00000570659 DBNDD1Q9H9R9 158 aa9.73□□□□□ -0.85
SMG6-205ENST00000570659 RRP7AQ9Y3A4 280 aaKnown RBP9.73□□□□□ -0.85
SMG6-205ENST00000570659 IBTKQ9P2D0 1353 aaPredicted RBP9.73□□□□□ -0.85
SMG6-205ENST00000570659 WTIPA6NIX2 430 aaPredicted RBP9.72□□□□□ -0.85
SMG6-205ENST00000570659 PDIA6Q15084 440 aa9.72□□□□□ -0.85
SMG6-205ENST00000570659 CDCA5Q96FF9 252 aa9.72□□□□□ -0.85
SMG6-205ENST00000570659 ERVV-1B6SEH8 477 aa9.71□□□□□ -0.86
SMG6-205ENST00000570659 RIMBP2O15034 1052 aa9.71□□□□□ -0.86
SMG6-205ENST00000570659 RGL2O15211 777 aa9.71□□□□□ -0.86
SMG6-205ENST00000570659 MKRN3Q13064 507 aaKnown RBP9.71□□□□□ -0.86
SMG6-205ENST00000570659 DOK7Q18PE1 504 aa9.71□□□□□ -0.86
SMG6-205ENST00000570659 DPP8Q6V1X1 898 aaPredicted RBP9.71□□□□□ -0.86
SMG6-205ENST00000570659 NPM2Q86SE8 214 aaKnown RBP9.71□□□□□ -0.86
SMG6-205ENST00000570659 GGA3Q9NZ52 723 aa9.71□□□□□ -0.86
SMG6-205ENST00000570659 POLLQ9UGP5 575 aa9.71□□□□□ -0.86
SMG6-205ENST00000570659 FZD1Q9UP38 647 aa9.71□□□□□ -0.86
SMG6-205ENST00000570659 TRIOBPQ9H2D6 2365 aa9.7□□□□□ -0.86
SMG6-205ENST00000570659 EIF4A1P60842 406 aaKnown RBP9.7□□□□□ -0.86
SMG6-205ENST00000570659 SLC10A5Q5PT55 438 aa9.7□□□□□ -0.86
SMG6-205ENST00000570659 SP8Q8IXZ3 490 aa9.7□□□□□ -0.86
SMG6-205ENST00000570659 MPNDQ8N594 471 aa9.7□□□□□ -0.86
SMG6-205ENST00000570659 CELF1Q92879 486 aaKnown RBP9.7□□□□□ -0.86
SMG6-205ENST00000570659 NYXQ9GZU5 481 aa9.7□□□□□ -0.86
SMG6-205ENST00000570659 CDHR2Q9BYE9 1310 aa9.7□□□□□ -0.86
SMG6-205ENST00000570659 UBE2Q2LH0YL09 131 aa9.69□□□□□ -0.86
SMG6-205ENST00000570659 EIF4G2P78344 907 aaKnown RBP eCLIP9.69□□□□□ -0.86
SMG6-205ENST00000570659 GPSM2P81274 684 aa9.69□□□□□ -0.86
SMG6-205ENST00000570659 GIGYF2Q6Y7W6 1299 aaKnown RBP9.69□□□□□ -0.86
SMG6-205ENST00000570659 RBBP6Q7Z6E9 1792 aaKnown RBP9.69□□□□□ -0.86
SMG6-205ENST00000570659 C2orf69Q8N8R5 385 aa9.69□□□□□ -0.86
SMG6-205ENST00000570659 CCDC102AQ96A19 550 aa9.69□□□□□ -0.86
SMG6-205ENST00000570659 COLQQ9Y215 455 aaPredicted RBP9.69□□□□□ -0.86
SMG6-205ENST00000570659 KIAA0100Q14667 2235 aaKnown RBP9.68□□□□□ -0.86
SMG6-205ENST00000570659 ZSWIM8A7E2V4 1837 aa9.68□□□□□ -0.86
SMG6-205ENST00000570659 H7C1D1 291 aa9.68□□□□□ -0.86
SMG6-205ENST00000570659 GPR25O00155 361 aa9.68□□□□□ -0.86
SMG6-205ENST00000570659 KIF4BQ2VIQ3 1234 aa9.68□□□□□ -0.86
SMG6-205ENST00000570659 ANGEL2Q5VTE6 544 aaKnown RBP9.68□□□□□ -0.86
SMG6-205ENST00000570659 RANBP2P49792 3224 aaKnown RBP9.67□□□□□ -0.86
SMG6-205ENST00000570659 ECE2O60344 883 aa9.67□□□□□ -0.86
SMG6-205ENST00000570659 EN2P19622 333 aaPredicted RBP9.67□□□□□ -0.86
SMG6-205ENST00000570659 TNIP1Q15025 636 aa9.67□□□□□ -0.86
SMG6-205ENST00000570659 NLRP10Q86W26 655 aa9.67□□□□□ -0.86
SMG6-205ENST00000570659 DPF2Q92785 391 aa9.67□□□□□ -0.86
SMG6-205ENST00000570659 MXD3Q9BW11 206 aa9.67□□□□□ -0.86
SMG6-205ENST00000570659 PSME4Q14997 1843 aa9.67□□□□□ -0.86
SMG6-205ENST00000570659 CEP290O15078 2479 aa9.66□□□□□ -0.86
SMG6-205ENST00000570659 GRAPQ13588 217 aa9.66□□□□□ -0.86
SMG6-205ENST00000570659 SCARF1Q14162 830 aa9.66□□□□□ -0.86
SMG6-205ENST00000570659 TAF7Q15545 349 aaPredicted RBP9.66□□□□□ -0.86
SMG6-205ENST00000570659 FBXO46Q6PJ61 603 aaPredicted RBP9.66□□□□□ -0.86
SMG6-205ENST00000570659 GRAPLQ8TC17 118 aaPredicted RBP9.66□□□□□ -0.86
SMG6-205ENST00000570659 NLRP3Q96P20 1036 aa9.66□□□□□ -0.86
SMG6-205ENST00000570659 UTP14AQ9BVJ6 771 aaKnown RBP9.66□□□□□ -0.86
SMG6-205ENST00000570659 VPS33BQ9H267 617 aa9.66□□□□□ -0.86
SMG6-205ENST00000570659 COL6A3P12111 3177 aa9.66□□□□□ -0.86
SMG6-205ENST00000570659 BBOX1O75936 387 aa9.65□□□□□ -0.86
SMG6-205ENST00000570659 KRT24Q2M2I5 525 aa9.65□□□□□ -0.86
SMG6-205ENST00000570659 GRIPAP1Q4V328 841 aa9.65□□□□□ -0.86
SMG6-205ENST00000570659 KIF6Q6ZMV9 814 aa9.65□□□□□ -0.86
SMG6-205ENST00000570659 SUPT20HQ8NEM7 779 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms