RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 THEMISQ8N1K5 641 aaPredicted RBP9.78□□□□□ -0.84
TCF4-246ENST00000570287 PRR12Q9ULL5 1215 aa9.78□□□□□ -0.84
TCF4-246ENST00000570287 USP17L15C9J2P7 530 aa9.77□□□□□ -0.84
TCF4-246ENST00000570287 USP17L10C9JJH3 530 aa9.77□□□□□ -0.84
TCF4-246ENST00000570287 USP17L13C9JLJ4 530 aa9.77□□□□□ -0.84
TCF4-246ENST00000570287 USP17L12C9JPN9 530 aa9.77□□□□□ -0.84
TCF4-246ENST00000570287 USP17L11C9JVI0 530 aa9.77□□□□□ -0.84
TCF4-246ENST00000570287 USP17L21D6R901 530 aa9.77□□□□□ -0.84
TCF4-246ENST00000570287 USP17L18D6R9N7 530 aa9.77□□□□□ -0.84
TCF4-246ENST00000570287 USP17L22D6RA61 530 aa9.77□□□□□ -0.84
TCF4-246ENST00000570287 USP17L17D6RBQ6 530 aa9.77□□□□□ -0.84
TCF4-246ENST00000570287 USP17L19D6RCP7 530 aa9.77□□□□□ -0.84
TCF4-246ENST00000570287 USP17L20D6RJB6 530 aa9.77□□□□□ -0.84
TCF4-246ENST00000570287 USP17L24Q0WX57 530 aa9.77□□□□□ -0.84
TCF4-246ENST00000570287 HSP90AB4PQ58FF6 505 aa9.77□□□□□ -0.84
TCF4-246ENST00000570287 DDX11L8A8MPP1 907 aa9.77□□□□□ -0.85
TCF4-246ENST00000570287 ECM1Q16610 540 aa9.77□□□□□ -0.85
TCF4-246ENST00000570287 SPOCK3Q9BQ16 436 aa9.77□□□□□ -0.85
TCF4-246ENST00000570287 UPF2Q9HAU5 1272 aaKnown RBP9.77□□□□□ -0.85
TCF4-246ENST00000570287 ADGRG1Q9Y653 693 aa9.77□□□□□ -0.85
TCF4-246ENST00000570287 RGPD1P0DJD0 1748 aa9.77□□□□□ -0.85
TCF4-246ENST00000570287 EN1Q05925 392 aaPredicted RBP9.77□□□□□ -0.85
TCF4-246ENST00000570287 TWISTNBQ3B726 338 aaPredicted RBP9.77□□□□□ -0.85
TCF4-246ENST00000570287 MICALL2Q8IY33 904 aa9.77□□□□□ -0.85
TCF4-246ENST00000570287 TSPYL6Q8N831 410 aa9.77□□□□□ -0.85
TCF4-246ENST00000570287 CHMP5Q9NZZ3 219 aa9.77□□□□□ -0.85
TCF4-246ENST00000570287 RIMS1Q86UR5 1692 aaKnown RBP9.76□□□□□ -0.85
TCF4-246ENST00000570287 UTP14CQ5TAP6 766 aaKnown RBP9.76□□□□□ -0.85
TCF4-246ENST00000570287 PEAK1Q9H792 1746 aa9.76□□□□□ -0.85
TCF4-246ENST00000570287 PRMT3O60678 531 aa9.76□□□□□ -0.85
TCF4-246ENST00000570287 SULT6B1Q6IMI4 303 aa9.76□□□□□ -0.85
TCF4-246ENST00000570287 MORC4Q8TE76 937 aa9.76□□□□□ -0.85
TCF4-246ENST00000570287 CUEDC1Q9NWM3 386 aaPredicted RBP9.76□□□□□ -0.85
TCF4-246ENST00000570287 MTERF4Q7Z6M4 381 aaKnown RBP9.75□□□□□ -0.85
TCF4-246ENST00000570287 TMEM87AQ8NBN3 555 aa9.75□□□□□ -0.85
TCF4-246ENST00000570287 FAM174AQ8TBP5 190 aa9.75□□□□□ -0.85
TCF4-246ENST00000570287 XRN1Q8IZH2 1706 aaKnown RBP9.75□□□□□ -0.85
TCF4-246ENST00000570287 ABCC4O15439 1325 aa9.75□□□□□ -0.85
TCF4-246ENST00000570287 IBTKQ9P2D0 1353 aaPredicted RBP9.75□□□□□ -0.85
TCF4-246ENST00000570287 ZBTB7BO15156 539 aaPredicted RBP9.75□□□□□ -0.85
TCF4-246ENST00000570287 P4HBP07237 508 aaKnown RBP9.75□□□□□ -0.85
TCF4-246ENST00000570287 TRIM44Q96DX7 344 aaPredicted RBP9.75□□□□□ -0.85
TCF4-246ENST00000570287 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.75□□□□□ -0.85
TCF4-246ENST00000570287 ZSCAN30Q86W11 494 aa9.75□□□□□ -0.85
TCF4-246ENST00000570287 TMTC2Q8N394 836 aa9.75□□□□□ -0.85
TCF4-246ENST00000570287 C8orf58Q8NAV2 365 aa9.75□□□□□ -0.85
TCF4-246ENST00000570287 ZNF830Q96NB3 372 aaPredicted RBP9.75□□□□□ -0.85
TCF4-246ENST00000570287 API5Q9BZZ5 524 aaKnown RBP9.75□□□□□ -0.85
TCF4-246ENST00000570287 ARHGEF10O15013 1369 aa9.74□□□□□ -0.85
TCF4-246ENST00000570287 FAM83GA6ND36 823 aa9.74□□□□□ -0.85
TCF4-246ENST00000570287 CCDC173Q0VFZ6 552 aa9.74□□□□□ -0.85
TCF4-246ENST00000570287 KCNH2Q12809 1159 aa9.74□□□□□ -0.85
TCF4-246ENST00000570287 TMEM106CQ9BVX2 250 aa9.74□□□□□ -0.85
TCF4-246ENST00000570287 KIF24Q5T7B8 1368 aa9.74□□□□□ -0.85
TCF4-246ENST00000570287 ANKARQ7Z5J8 1434 aa9.74□□□□□ -0.85
TCF4-246ENST00000570287 FMN2Q9NZ56 1722 aa9.74□□□□□ -0.85
TCF4-246ENST00000570287 NUCB1Q02818 461 aa9.74□□□□□ -0.85
TCF4-246ENST00000570287 HSP90AB2PQ58FF8 381 aa9.74□□□□□ -0.85
TCF4-246ENST00000570287 METTL14Q9HCE5 456 aaKnown RBP9.74□□□□□ -0.85
TCF4-246ENST00000570287 COL4A3BPQ9Y5P4 624 aa9.74□□□□□ -0.85
TCF4-246ENST00000570287 CREB3O43889 395 aa9.73□□□□□ -0.85
TCF4-246ENST00000570287 FANCCQ00597 558 aa9.73□□□□□ -0.85
TCF4-246ENST00000570287 SETQ01105 290 aaPredicted RBP9.73□□□□□ -0.85
TCF4-246ENST00000570287 PTK7Q13308 1070 aa9.73□□□□□ -0.85
TCF4-246ENST00000570287 HS1BP3Q53T59 392 aa9.73□□□□□ -0.85
TCF4-246ENST00000570287 GAS2L3Q86XJ1 694 aa9.73□□□□□ -0.85
TCF4-246ENST00000570287 GAS2L2Q8NHY3 880 aa9.73□□□□□ -0.85
TCF4-246ENST00000570287 ZNF594Q96JF6 807 aaPredicted RBP9.73□□□□□ -0.85
TCF4-246ENST00000570287 ASB16Q96NS5 453 aa9.73□□□□□ -0.85
TCF4-246ENST00000570287 SBNO1A3KN83 1393 aa9.73□□□□□ -0.85
TCF4-246ENST00000570287 ELL2O00472 640 aaPredicted RBP9.73□□□□□ -0.85
TCF4-246ENST00000570287 PTMAP06454 111 aaKnown RBP9.73□□□□□ -0.85
TCF4-246ENST00000570287 DCTN1Q14203 1278 aa9.73□□□□□ -0.85
TCF4-246ENST00000570287 GCC1Q96CN9 775 aa9.73□□□□□ -0.85
TCF4-246ENST00000570287 FLT4P35916 1363 aa9.73□□□□□ -0.85
TCF4-246ENST00000570287 KIAA0232Q92628 1395 aa9.73□□□□□ -0.85
TCF4-246ENST00000570287 CHL1O00533 1208 aa9.73□□□□□ -0.85
TCF4-246ENST00000570287 NGDNQ8NEJ9 315 aaKnown RBP9.73□□□□□ -0.85
TCF4-246ENST00000570287 FBXO41Q8TF61 875 aa9.73□□□□□ -0.85
TCF4-246ENST00000570287 PNMA2Q9UL42 364 aa9.73□□□□□ -0.85
TCF4-246ENST00000570287 PCDHGB7Q9Y5F8 929 aa9.73□□□□□ -0.85
TCF4-246ENST00000570287 RGPD8O14715 1765 aaPredicted RBP9.72□□□□□ -0.85
TCF4-246ENST00000570287 MAP3K19Q56UN5 1328 aa9.72□□□□□ -0.85
TCF4-246ENST00000570287 USP17L5A8MUK1 530 aa9.72□□□□□ -0.85
TCF4-246ENST00000570287 DIXDC1Q155Q3 683 aa9.72□□□□□ -0.85
TCF4-246ENST00000570287 EAPPQ56P03 285 aaPredicted RBP9.72□□□□□ -0.85
TCF4-246ENST00000570287 GLYCTKQ8IVS8 523 aa9.72□□□□□ -0.85
TCF4-246ENST00000570287 REM2Q8IYK8 340 aaPredicted RBP9.72□□□□□ -0.85
TCF4-246ENST00000570287 HELBQ8NG08 1087 aaPredicted RBP9.72□□□□□ -0.85
TCF4-246ENST00000570287 CLP1Q92989 425 aaKnown RBP9.72□□□□□ -0.85
TCF4-246ENST00000570287 SEPT3Q9UH03 358 aa9.72□□□□□ -0.85
TCF4-246ENST00000570287 PIK3C2AO00443 1686 aa9.71□□□□□ -0.85
TCF4-246ENST00000570287 ZNF500O60304 480 aaPredicted RBP9.71□□□□□ -0.85
TCF4-246ENST00000570287 ARHGAP4P98171 946 aa9.71□□□□□ -0.85
TCF4-246ENST00000570287 NR6A1Q15406 480 aa9.71□□□□□ -0.85
TCF4-246ENST00000570287 CHD1LQ86WJ1 897 aa9.71□□□□□ -0.85
TCF4-246ENST00000570287 SETDB2Q96T68 719 aa9.71□□□□□ -0.85
TCF4-246ENST00000570287 MKRN1Q9UHC7 482 aaKnown RBP9.71□□□□□ -0.85
TCF4-246ENST00000570287 KDRP35968 1356 aa9.71□□□□□ -0.85
TCF4-246ENST00000570287 KIF3CO14782 793 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms