RNA–Protein interactions for RNA: ENST00000569773.1

GDE1-204, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 3

Gene GDE1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-204ENST00000569773 SLC26A8Q96RN1 970 aa8.53□□□□□ -1.04
GDE1-204ENST00000569773 TRAIPQ9BWF2 469 aa8.53□□□□□ -1.04
GDE1-204ENST00000569773 POLMQ9NP87 494 aaPredicted RBP8.53□□□□□ -1.04
GDE1-204ENST00000569773 AAASQ9NRG9 546 aa8.53□□□□□ -1.04
GDE1-204ENST00000569773 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.53□□□□□ -1.04
GDE1-204ENST00000569773 ADAMTS13Q76LX8 1427 aa8.53□□□□□ -1.04
GDE1-204ENST00000569773 RIMS2Q9UQ26 1411 aa8.53□□□□□ -1.04
GDE1-204ENST00000569773 PHLPP1O60346 1717 aa8.52□□□□□ -1.05
GDE1-204ENST00000569773 XRN1Q8IZH2 1706 aaKnown RBP8.52□□□□□ -1.05
GDE1-204ENST00000569773 A6NJY4 79 aa8.52□□□□□ -1.05
GDE1-204ENST00000569773 PRMT3O60678 531 aa8.52□□□□□ -1.05
GDE1-204ENST00000569773 CTSOP43234 321 aaPredicted RBP8.52□□□□□ -1.05
GDE1-204ENST00000569773 SMTNP53814 917 aa8.52□□□□□ -1.05
GDE1-204ENST00000569773 EPHA4P54764 986 aa8.52□□□□□ -1.05
GDE1-204ENST00000569773 CENPCQ03188 943 aa8.52□□□□□ -1.05
GDE1-204ENST00000569773 SCARF1Q14162 830 aa8.52□□□□□ -1.05
GDE1-204ENST00000569773 CLP1Q92989 425 aaKnown RBP8.52□□□□□ -1.05
GDE1-204ENST00000569773 COL16A1Q07092 1604 aaPredicted RBP8.51□□□□□ -1.05
GDE1-204ENST00000569773 MTFR1Q15390 333 aa8.51□□□□□ -1.05
GDE1-204ENST00000569773 TBCELQ5QJ74 424 aa8.51□□□□□ -1.05
GDE1-204ENST00000569773 PRIMPOLQ96LW4 560 aa8.51□□□□□ -1.05
GDE1-204ENST00000569773 FHDC1Q9C0D6 1143 aaPredicted RBP8.51□□□□□ -1.05
GDE1-204ENST00000569773 DACH1Q9UI36 760 aa8.51□□□□□ -1.05
GDE1-204ENST00000569773 FOXD4L5Q5VV16 416 aaPredicted RBP8.5□□□□□ -1.05
GDE1-204ENST00000569773 GAS2L2Q8NHY3 880 aa8.5□□□□□ -1.05
GDE1-204ENST00000569773 ZFP42Q96MM3 310 aa8.5□□□□□ -1.05
GDE1-204ENST00000569773 TSPAN10Q9H1Z9 355 aaPredicted RBP8.5□□□□□ -1.05
GDE1-204ENST00000569773 SCHIP1Q9P0W5 487 aaPredicted RBP8.5□□□□□ -1.05
GDE1-204ENST00000569773 USP3Q9Y6I4 520 aa8.5□□□□□ -1.05
GDE1-204ENST00000569773 SETBP1Q9Y6X0 1596 aa8.5□□□□□ -1.05
GDE1-204ENST00000569773 NCOA3Q9Y6Q9 1424 aa8.49□□□□□ -1.05
GDE1-204ENST00000569773 ATP2B4P23634 1241 aa8.49□□□□□ -1.05
GDE1-204ENST00000569773 SLC27A3Q5K4L6 730 aa8.49□□□□□ -1.05
GDE1-204ENST00000569773 SLC9A9Q8IVB4 645 aa8.49□□□□□ -1.05
GDE1-204ENST00000569773 ZSCAN10Q96SZ4 725 aaPredicted RBP8.49□□□□□ -1.05
GDE1-204ENST00000569773 ATP13A2Q9NQ11 1180 aa8.49□□□□□ -1.05
GDE1-204ENST00000569773 TBX22Q9Y458 520 aa8.49□□□□□ -1.05
GDE1-204ENST00000569773 CLTCL1P53675 1640 aa8.49□□□□□ -1.05
GDE1-204ENST00000569773 KIF1BO60333 1816 aa8.49□□□□□ -1.05
GDE1-204ENST00000569773 PTPRUQ92729 1446 aa8.48□□□□□ -1.05
GDE1-204ENST00000569773 RRBP1Q9P2E9 1410 aaKnown RBP8.48□□□□□ -1.05
GDE1-204ENST00000569773 AHDC1Q5TGY3 1603 aaPredicted RBP8.48□□□□□ -1.05
GDE1-204ENST00000569773 GPC1P35052 558 aa8.48□□□□□ -1.05
GDE1-204ENST00000569773 RNF144AP50876 292 aaPredicted RBP8.48□□□□□ -1.05
GDE1-204ENST00000569773 FOXK2Q01167 660 aa8.48□□□□□ -1.05
GDE1-204ENST00000569773 OCLNQ16625 522 aa8.48□□□□□ -1.05
GDE1-204ENST00000569773 SCG3Q8WXD2 468 aaKnown RBP8.48□□□□□ -1.05
GDE1-204ENST00000569773 GRIP2Q9C0E4 1043 aa8.48□□□□□ -1.05
GDE1-204ENST00000569773 IQSEC3Q9UPP2 1182 aaPredicted RBP8.48□□□□□ -1.05
GDE1-204ENST00000569773 SHPRHQ149N8 1683 aa8.48□□□□□ -1.05
GDE1-204ENST00000569773 TRPM2O94759 1503 aa8.48□□□□□ -1.05
GDE1-204ENST00000569773 NUP155O75694 1391 aa8.48□□□□□ -1.05
GDE1-204ENST00000569773 PIK3R4Q99570 1358 aa8.48□□□□□ -1.05
GDE1-204ENST00000569773 CDK2AP1O14519 115 aa8.47□□□□□ -1.05
GDE1-204ENST00000569773 C21orf2O43822 256 aa8.47□□□□□ -1.05
GDE1-204ENST00000569773 SSFA2P28290 1259 aa8.47□□□□□ -1.05
GDE1-204ENST00000569773 WEE1P30291 646 aa8.47□□□□□ -1.05
GDE1-204ENST00000569773 TMEM214Q6NUQ4 689 aaKnown RBP8.47□□□□□ -1.05
GDE1-204ENST00000569773 RNF217Q8TC41 542 aa8.47□□□□□ -1.05
GDE1-204ENST00000569773 CXXC1Q9P0U4 656 aaPredicted RBP8.47□□□□□ -1.05
GDE1-204ENST00000569773 NEXMIFQ5QGS0 1516 aa8.47□□□□□ -1.05
GDE1-204ENST00000569773 MSH6P52701 1360 aa8.47□□□□□ -1.05
GDE1-204ENST00000569773 NHSL1Q5SYE7 1610 aa8.47□□□□□ -1.05
GDE1-204ENST00000569773 ATAD2Q6PL18 1390 aa8.47□□□□□ -1.05
GDE1-204ENST00000569773 NALCNQ8IZF0 1738 aa8.46□□□□□ -1.05
GDE1-204ENST00000569773 FIGNL2A6NMB9 653 aa8.46□□□□□ -1.06
GDE1-204ENST00000569773 TTLL8A6PVC2 850 aa8.46□□□□□ -1.06
GDE1-204ENST00000569773 IGFBP4P22692 258 aa8.46□□□□□ -1.06
GDE1-204ENST00000569773 PHLDB3Q6NSJ2 640 aa8.46□□□□□ -1.06
GDE1-204ENST00000569773 POTEAQ6S8J7 498 aa8.46□□□□□ -1.06
GDE1-204ENST00000569773 PRICKLE2Q7Z3G6 844 aa8.46□□□□□ -1.06
GDE1-204ENST00000569773 SOS2Q07890 1332 aaPredicted RBP8.46□□□□□ -1.06
GDE1-204ENST00000569773 NAIPQ13075 1403 aa8.46□□□□□ -1.06
GDE1-204ENST00000569773 PPP1R12BO60237 982 aaPredicted RBP8.45□□□□□ -1.06
GDE1-204ENST00000569773 BRD1O95696 1058 aa8.45□□□□□ -1.06
GDE1-204ENST00000569773 GTF2E1P29083 439 aaPredicted RBP8.45□□□□□ -1.06
GDE1-204ENST00000569773 SCNN1AP37088 669 aa8.45□□□□□ -1.06
GDE1-204ENST00000569773 FKBP5Q13451 457 aaPredicted RBP8.45□□□□□ -1.06
GDE1-204ENST00000569773 PPARGC1BQ86YN6 1023 aaKnown RBP8.45□□□□□ -1.06
GDE1-204ENST00000569773 NBPF15Q8N660 670 aa8.45□□□□□ -1.06
GDE1-204ENST00000569773 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.45□□□□□ -1.06
GDE1-204ENST00000569773 PPLO60437 1756 aa8.45□□□□□ -1.06
GDE1-204ENST00000569773 LRP6O75581 1613 aa8.44□□□□□ -1.06
GDE1-204ENST00000569773 B4GALNT3Q6L9W6 998 aa8.44□□□□□ -1.06
GDE1-204ENST00000569773 AEBP1Q8IUX7 1158 aa8.44□□□□□ -1.06
GDE1-204ENST00000569773 RHBDD1Q8TEB9 315 aa8.44□□□□□ -1.06
GDE1-204ENST00000569773 MKNK1Q9BUB5 465 aa8.44□□□□□ -1.06
GDE1-204ENST00000569773 CABP1Q9NZU7 370 aa8.44□□□□□ -1.06
GDE1-204ENST00000569773 LAMC1P11047 1609 aa8.43□□□□□ -1.06
GDE1-204ENST00000569773 PSMA6P60900 246 aaKnown RBP8.43□□□□□ -1.06
GDE1-204ENST00000569773 C4orf17Q53FE4 359 aa8.43□□□□□ -1.06
GDE1-204ENST00000569773 GNASQ5JWF2 1037 aa8.43□□□□□ -1.06
GDE1-204ENST00000569773 LYSMD3Q7Z3D4 306 aa8.43□□□□□ -1.06
GDE1-204ENST00000569773 ZNF295-AS1Q8N0V1 137 aa8.43□□□□□ -1.06
GDE1-204ENST00000569773 NIFKQ9BYG3 293 aaKnown RBP8.43□□□□□ -1.06
GDE1-204ENST00000569773 DNMT3LQ9UJW3 386 aa8.43□□□□□ -1.06
GDE1-204ENST00000569773 PARP3Q9Y6F1 533 aa8.43□□□□□ -1.06
GDE1-204ENST00000569773 DCCP43146 1447 aa8.43□□□□□ -1.06
GDE1-204ENST00000569773 IFT172Q9UG01 1749 aa8.43□□□□□ -1.06
GDE1-204ENST00000569773 FOXO3O43524 673 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms