RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 KDM6AO15550 1401 aaPredicted RBP8.29□□□□□ -1.08
CDH13-212ENST00000569144 KDRP35968 1356 aa8.28□□□□□ -1.08
CDH13-212ENST00000569144 GLTPD2A6NH11 291 aa8.28□□□□□ -1.08
CDH13-212ENST00000569144 FOXN1O15353 648 aa8.28□□□□□ -1.08
CDH13-212ENST00000569144 BRPF1P55201 1214 aaPredicted RBP8.28□□□□□ -1.08
CDH13-212ENST00000569144 USP46P62068 366 aa8.28□□□□□ -1.08
CDH13-212ENST00000569144 GRIPAP1Q4V328 841 aa8.28□□□□□ -1.08
CDH13-212ENST00000569144 MORN1Q5T089 497 aa8.28□□□□□ -1.08
CDH13-212ENST00000569144 ASAP1Q9ULH1 1129 aa8.28□□□□□ -1.08
CDH13-212ENST00000569144 FLT4P35916 1363 aa8.27□□□□□ -1.09
CDH13-212ENST00000569144 KIF24Q5T7B8 1368 aa8.27□□□□□ -1.09
CDH13-212ENST00000569144 HOXA2O43364 376 aa8.27□□□□□ -1.09
CDH13-212ENST00000569144 NR1I2O75469 434 aa8.27□□□□□ -1.09
CDH13-212ENST00000569144 RFC4P35249 363 aa8.27□□□□□ -1.09
CDH13-212ENST00000569144 RC3H1Q5TC82 1133 aaKnown RBP8.27□□□□□ -1.09
CDH13-212ENST00000569144 SPIRE2Q8WWL2 714 aa8.27□□□□□ -1.09
CDH13-212ENST00000569144 ATG3Q9NT62 314 aa8.27□□□□□ -1.09
CDH13-212ENST00000569144 SPG7Q9UQ90 795 aa8.27□□□□□ -1.09
CDH13-212ENST00000569144 NCAPD2Q15021 1401 aa8.27□□□□□ -1.09
CDH13-212ENST00000569144 CNTNAP4Q9C0A0 1308 aa8.27□□□□□ -1.09
CDH13-212ENST00000569144 ZPR1O75312 459 aa8.26□□□□□ -1.09
CDH13-212ENST00000569144 RPS6KA4O75676 772 aa8.26□□□□□ -1.09
CDH13-212ENST00000569144 LMNB1P20700 586 aa8.26□□□□□ -1.09
CDH13-212ENST00000569144 CTCFP49711 727 aaPredicted RBP8.26□□□□□ -1.09
CDH13-212ENST00000569144 RASSF7Q02833 373 aa8.26□□□□□ -1.09
CDH13-212ENST00000569144 HSP90AB2PQ58FF8 381 aa8.26□□□□□ -1.09
CDH13-212ENST00000569144 SCUBE3Q8IX30 993 aa8.26□□□□□ -1.09
CDH13-212ENST00000569144 HLA-CQ95604 372 aa8.26□□□□□ -1.09
CDH13-212ENST00000569144 TBC1D2Q9BYX2 928 aa8.26□□□□□ -1.09
CDH13-212ENST00000569144 MKRN1Q9UHC7 482 aaKnown RBP8.26□□□□□ -1.09
CDH13-212ENST00000569144 CNTNAP1P78357 1384 aa8.25□□□□□ -1.09
CDH13-212ENST00000569144 ZNF831Q5JPB2 1677 aa8.25□□□□□ -1.09
CDH13-212ENST00000569144 TLL1O43897 1013 aa8.25□□□□□ -1.09
CDH13-212ENST00000569144 CHRNA5P30532 468 aa8.25□□□□□ -1.09
CDH13-212ENST00000569144 SLC4A9Q96Q91 983 aa8.25□□□□□ -1.09
CDH13-212ENST00000569144 CARD11Q9BXL7 1154 aa8.25□□□□□ -1.09
CDH13-212ENST00000569144 FAM117AQ9C073 453 aa8.25□□□□□ -1.09
CDH13-212ENST00000569144 SLC27A5Q9Y2P5 690 aa8.25□□□□□ -1.09
CDH13-212ENST00000569144 SBF1O95248 1867 aa8.24□□□□□ -1.09
CDH13-212ENST00000569144 POTECB2RU33 542 aa8.24□□□□□ -1.09
CDH13-212ENST00000569144 FYB1O15117 783 aa8.24□□□□□ -1.09
CDH13-212ENST00000569144 PHKG2P15735 406 aa8.24□□□□□ -1.09
CDH13-212ENST00000569144 GUCA2AQ02747 115 aa8.24□□□□□ -1.09
CDH13-212ENST00000569144 DDR1Q08345 913 aa8.24□□□□□ -1.09
CDH13-212ENST00000569144 IFNL2Q8IZJ0 200 aa8.24□□□□□ -1.09
CDH13-212ENST00000569144 AIDAQ96BJ3 306 aa8.24□□□□□ -1.09
CDH13-212ENST00000569144 GGNBP2Q9H3C7 697 aa8.24□□□□□ -1.09
CDH13-212ENST00000569144 TONSLQ96HA7 1378 aa8.23□□□□□ -1.09
CDH13-212ENST00000569144 MOXD2PA6NHM9 499 aa8.23□□□□□ -1.09
CDH13-212ENST00000569144 NDUFV2P19404 249 aa8.23□□□□□ -1.09
CDH13-212ENST00000569144 DIXDC1Q155Q3 683 aa8.23□□□□□ -1.09
CDH13-212ENST00000569144 NKX2-3Q8TAU0 364 aa8.23□□□□□ -1.09
CDH13-212ENST00000569144 DDRGK1Q96HY6 314 aa8.23□□□□□ -1.09
CDH13-212ENST00000569144 ABHD8Q96I13 439 aa8.23□□□□□ -1.09
CDH13-212ENST00000569144 USP42Q9H9J4 1324 aaKnown RBP8.23□□□□□ -1.09
CDH13-212ENST00000569144 COL5A3P25940 1745 aaPredicted RBP8.23□□□□□ -1.09
CDH13-212ENST00000569144 POLRMTO00411 1230 aaKnown RBP8.22□□□□□ -1.09
CDH13-212ENST00000569144 MLLT1Q03111 559 aaPredicted RBP8.22□□□□□ -1.09
CDH13-212ENST00000569144 SRP68Q9UHB9 627 aaKnown RBP8.22□□□□□ -1.09
CDH13-212ENST00000569144 TIAM2Q8IVF5 1701 aa8.22□□□□□ -1.09
CDH13-212ENST00000569144 ERVV-2B6SEH9 535 aa8.21□□□□□ -1.1
CDH13-212ENST00000569144 FDX1P10109 184 aa8.21□□□□□ -1.1
CDH13-212ENST00000569144 TM4SF1P30408 202 aa8.21□□□□□ -1.1
CDH13-212ENST00000569144 RGS19P49795 217 aa8.21□□□□□ -1.1
CDH13-212ENST00000569144 LBX1P52954 281 aa8.21□□□□□ -1.1
CDH13-212ENST00000569144 SIN3AQ96ST3 1273 aa8.21□□□□□ -1.1
CDH13-212ENST00000569144 NFKBIEO00221 500 aa8.2□□□□□ -1.1
CDH13-212ENST00000569144 FMNL1O95466 1100 aaPredicted RBP8.2□□□□□ -1.1
CDH13-212ENST00000569144 HSPA8P11142 646 aaKnown RBP8.2□□□□□ -1.1
CDH13-212ENST00000569144 CRKLP46109 303 aaKnown RBP8.2□□□□□ -1.1
CDH13-212ENST00000569144 VEGFBP49765 207 aa8.2□□□□□ -1.1
CDH13-212ENST00000569144 Q3C1V9 767 aa8.2□□□□□ -1.1
CDH13-212ENST00000569144 MYSM1Q5VVJ2 828 aa8.2□□□□□ -1.1
CDH13-212ENST00000569144 RNF19BQ6ZMZ0 732 aa8.2□□□□□ -1.1
CDH13-212ENST00000569144 TTLL6Q8N841 843 aa8.2□□□□□ -1.1
CDH13-212ENST00000569144 THAP11Q96EK4 314 aa8.2□□□□□ -1.1
CDH13-212ENST00000569144 TESK2Q96S53 571 aa8.2□□□□□ -1.1
CDH13-212ENST00000569144 SPSB2Q99619 263 aa8.2□□□□□ -1.1
CDH13-212ENST00000569144 EMILIN1Q9Y6C2 1016 aa8.2□□□□□ -1.1
CDH13-212ENST00000569144 PASKQ96RG2 1323 aa8.2□□□□□ -1.1
CDH13-212ENST00000569144 ADH1BP00325 375 aa8.19□□□□□ -1.1
CDH13-212ENST00000569144 HSP90AB1P08238 724 aaKnown RBP8.19□□□□□ -1.1
CDH13-212ENST00000569144 RSBN1LQ6PCB5 846 aaPredicted RBP8.19□□□□□ -1.1
CDH13-212ENST00000569144 RIC3Q7Z5B4 369 aa8.19□□□□□ -1.1
CDH13-212ENST00000569144 IL27Q8NEV9 243 aa8.19□□□□□ -1.1
CDH13-212ENST00000569144 RSPH6AQ9H0K4 717 aa8.19□□□□□ -1.1
CDH13-212ENST00000569144 PCDHGC3Q9UN70 934 aa8.19□□□□□ -1.1
CDH13-212ENST00000569144 TMEM88BA6NKF7 163 aa8.18□□□□□ -1.1
CDH13-212ENST00000569144 NEUROD1Q13562 356 aa8.18□□□□□ -1.1
CDH13-212ENST00000569144 ERFEQ4G0M1 354 aa8.18□□□□□ -1.1
CDH13-212ENST00000569144 BRICD5Q6PL45 260 aa8.18□□□□□ -1.1
CDH13-212ENST00000569144 LDHDQ86WU2 507 aa8.18□□□□□ -1.1
CDH13-212ENST00000569144 SYMPKQ92797 1274 aaKnown RBP8.18□□□□□ -1.1
CDH13-212ENST00000569144 SALL2Q9Y467 1007 aaPredicted RBP8.18□□□□□ -1.1
CDH13-212ENST00000569144 WASHC2AQ641Q2 1341 aa8.18□□□□□ -1.1
CDH13-212ENST00000569144 DLEC1Q9Y238 1755 aa8.17□□□□□ -1.1
CDH13-212ENST00000569144 MYH14Q7Z406 1995 aaKnown RBP8.17□□□□□ -1.1
CDH13-212ENST00000569144 IQCA1LA6NCM1 817 aa8.17□□□□□ -1.1
CDH13-212ENST00000569144 CCDC85CA6NKD9 419 aa8.17□□□□□ -1.1
CDH13-212ENST00000569144 SPTLC1O15269 473 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms