RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 RNF166Q96A37 237 aaPredicted RBP12.05□□□□□ -0.48
CAPN3-219ENST00000569136 CCDC87Q9NVE4 849 aa12.05□□□□□ -0.48
CAPN3-219ENST00000569136 RREB1Q92766 1687 aa12.05□□□□□ -0.48
CAPN3-219ENST00000569136 SHANK3Q9BYB0 1731 aa12.04□□□□□ -0.48
CAPN3-219ENST00000569136 A0A087WZG4 1122 aa12.04□□□□□ -0.48
CAPN3-219ENST00000569136 DCTN1Q14203 1278 aa12.04□□□□□ -0.48
CAPN3-219ENST00000569136 THSD4Q6ZMP0 1018 aa12.04□□□□□ -0.48
CAPN3-219ENST00000569136 NPM2Q86SE8 214 aaKnown RBP12.04□□□□□ -0.48
CAPN3-219ENST00000569136 TMUB1Q9BVT8 246 aa12.04□□□□□ -0.48
CAPN3-219ENST00000569136 ZPR1O75312 459 aa12.03□□□□□ -0.48
CAPN3-219ENST00000569136 SYT17Q9BSW7 474 aa12.03□□□□□ -0.48
CAPN3-219ENST00000569136 NUP188Q5SRE5 1749 aa12.03□□□□□ -0.48
CAPN3-219ENST00000569136 AMIGO3Q86WK7 504 aa12.02□□□□□ -0.49
CAPN3-219ENST00000569136 FHDC1Q9C0D6 1143 aaPredicted RBP12.02□□□□□ -0.49
CAPN3-219ENST00000569136 TSR3Q9UJK0 312 aaKnown RBP12.02□□□□□ -0.49
CAPN3-219ENST00000569136 CD2APQ9Y5K6 639 aa12.02□□□□□ -0.49
CAPN3-219ENST00000569136 HEG1Q9ULI3 1381 aa12.02□□□□□ -0.49
CAPN3-219ENST00000569136 DOT1LQ8TEK3 1739 aa12.01□□□□□ -0.49
CAPN3-219ENST00000569136 KCNQ3O43525 872 aa12.01□□□□□ -0.49
CAPN3-219ENST00000569136 MS4A1P11836 297 aa12.01□□□□□ -0.49
CAPN3-219ENST00000569136 CCDC146Q8IYE0 955 aa12.01□□□□□ -0.49
CAPN3-219ENST00000569136 NECTIN2Q92692 538 aa12.01□□□□□ -0.49
CAPN3-219ENST00000569136 IL6STP40189 918 aaPredicted RBP12□□□□□ -0.49
CAPN3-219ENST00000569136 EIF5P55010 431 aaKnown RBP12□□□□□ -0.49
CAPN3-219ENST00000569136 CALD1Q05682 793 aaKnown RBP12□□□□□ -0.49
CAPN3-219ENST00000569136 MSL1Q68DK7 614 aa12□□□□□ -0.49
CAPN3-219ENST00000569136 SMIM5Q71RC9 77 aa12□□□□□ -0.49
CAPN3-219ENST00000569136 MRS2Q9HD23 443 aa12□□□□□ -0.49
CAPN3-219ENST00000569136 MIS18AQ9NYP9 233 aa12□□□□□ -0.49
CAPN3-219ENST00000569136 NARFQ9UHQ1 456 aa12□□□□□ -0.49
CAPN3-219ENST00000569136 MRC1P22897 1456 aa12□□□□□ -0.49
CAPN3-219ENST00000569136 CFHP08603 1231 aa11.99□□□□□ -0.49
CAPN3-219ENST00000569136 SLC10A3P09131 477 aa11.99□□□□□ -0.49
CAPN3-219ENST00000569136 GYS1P13807 737 aa11.99□□□□□ -0.49
CAPN3-219ENST00000569136 CANXP27824 592 aaKnown RBP11.99□□□□□ -0.49
CAPN3-219ENST00000569136 BEGAINQ9BUH8 593 aa11.99□□□□□ -0.49
CAPN3-219ENST00000569136 WBP1LQ9NX94 342 aa11.99□□□□□ -0.49
CAPN3-219ENST00000569136 SOS1Q07889 1333 aaPredicted RBP11.99□□□□□ -0.49
CAPN3-219ENST00000569136 PAPPAQ13219 1627 aa11.98□□□□□ -0.49
CAPN3-219ENST00000569136 CHL1O00533 1208 aa11.98□□□□□ -0.49
CAPN3-219ENST00000569136 APAF1O14727 1248 aa11.98□□□□□ -0.49
CAPN3-219ENST00000569136 GIGYF1O75420 1035 aaPredicted RBP11.98□□□□□ -0.49
CAPN3-219ENST00000569136 MMP10P09238 476 aa11.98□□□□□ -0.49
CAPN3-219ENST00000569136 CD46P15529 392 aa11.98□□□□□ -0.49
CAPN3-219ENST00000569136 EIF4A1P60842 406 aaKnown RBP11.98□□□□□ -0.49
CAPN3-219ENST00000569136 THUMPD2Q9BTF0 503 aaKnown RBP11.98□□□□□ -0.49
CAPN3-219ENST00000569136 TSPYL4Q9UJ04 414 aa11.98□□□□□ -0.49
CAPN3-219ENST00000569136 ZBTB1Q9Y2K1 713 aa11.98□□□□□ -0.49
CAPN3-219ENST00000569136 RRP7AQ9Y3A4 280 aaKnown RBP11.98□□□□□ -0.49
CAPN3-219ENST00000569136 USP16Q9Y5T5 823 aa11.98□□□□□ -0.49
CAPN3-219ENST00000569136 PARP3Q9Y6F1 533 aa11.98□□□□□ -0.49
CAPN3-219ENST00000569136 LY75O60449 1722 aa11.97□□□□□ -0.49
CAPN3-219ENST00000569136 LRP5O75197 1615 aa11.97□□□□□ -0.49
CAPN3-219ENST00000569136 USP42Q9H9J4 1324 aaKnown RBP11.97□□□□□ -0.49
CAPN3-219ENST00000569136 A1BGP04217 495 aa11.97□□□□□ -0.49
CAPN3-219ENST00000569136 MMRN1Q13201 1228 aa11.97□□□□□ -0.49
CAPN3-219ENST00000569136 KMT5BQ4FZB7 885 aa11.97□□□□□ -0.49
CAPN3-219ENST00000569136 TOGARAM1Q9Y4F4 1720 aa11.97□□□□□ -0.49
CAPN3-219ENST00000569136 ITGB4P16144 1822 aa11.96□□□□□ -0.49
CAPN3-219ENST00000569136 TM4SF1P30408 202 aa11.96□□□□□ -0.49
CAPN3-219ENST00000569136 USPL1Q5W0Q7 1092 aa11.96□□□□□ -0.49
CAPN3-219ENST00000569136 NUTM1Q86Y26 1132 aa11.96□□□□□ -0.49
CAPN3-219ENST00000569136 NGEFQ8N5V2 710 aa11.96□□□□□ -0.49
CAPN3-219ENST00000569136 IL27Q8NEV9 243 aa11.96□□□□□ -0.49
CAPN3-219ENST00000569136 CHMP4AQ9BY43 222 aa11.96□□□□□ -0.49
CAPN3-219ENST00000569136 FAM117AQ9C073 453 aa11.96□□□□□ -0.49
CAPN3-219ENST00000569136 TGFB2P61812 414 aa11.95□□□□□ -0.5
CAPN3-219ENST00000569136 CCDC184Q52MB2 194 aa11.95□□□□□ -0.5
CAPN3-219ENST00000569136 CLEC4GQ6UXB4 293 aa11.95□□□□□ -0.5
CAPN3-219ENST00000569136 SRP68Q9UHB9 627 aaKnown RBP11.95□□□□□ -0.5
CAPN3-219ENST00000569136 GRIN3BO60391 1043 aa11.94□□□□□ -0.5
CAPN3-219ENST00000569136 GNAI1P63096 354 aa11.94□□□□□ -0.5
CAPN3-219ENST00000569136 GPR162Q16538 588 aa11.94□□□□□ -0.5
CAPN3-219ENST00000569136 CCDC27Q2M243 656 aa11.94□□□□□ -0.5
CAPN3-219ENST00000569136 DDRGK1Q96HY6 314 aa11.94□□□□□ -0.5
CAPN3-219ENST00000569136 TBC1D2BQ9UPU7 963 aa11.94□□□□□ -0.5
CAPN3-219ENST00000569136 GCGRP47871 477 aa11.93□□□□□ -0.5
CAPN3-219ENST00000569136 PRR14Q9BWN1 585 aa11.93□□□□□ -0.5
CAPN3-219ENST00000569136 IFT57Q9NWB7 429 aa11.93□□□□□ -0.5
CAPN3-219ENST00000569136 ZNF330Q9Y3S2 320 aaPredicted RBP11.93□□□□□ -0.5
CAPN3-219ENST00000569136 LAS1LQ9Y4W2 734 aaKnown RBP11.93□□□□□ -0.5
CAPN3-219ENST00000569136 C4BP0C0L5 1744 aa11.93□□□□□ -0.5
CAPN3-219ENST00000569136 COL15A1P39059 1388 aa11.92□□□□□ -0.5
CAPN3-219ENST00000569136 ERBB4Q15303 1308 aa11.92□□□□□ -0.5
CAPN3-219ENST00000569136 KCPQ6ZWJ8 1503 aa11.92□□□□□ -0.5
CAPN3-219ENST00000569136 ADAMTS7Q9UKP4 1686 aa11.92□□□□□ -0.5
CAPN3-219ENST00000569136 PRAMEF22A3QJZ6 481 aa11.92□□□□□ -0.5
CAPN3-219ENST00000569136 HOXB7P09629 217 aa11.92□□□□□ -0.5
CAPN3-219ENST00000569136 ZNF853P0CG23 659 aa11.92□□□□□ -0.5
CAPN3-219ENST00000569136 NFIXQ14938 502 aa11.92□□□□□ -0.5
CAPN3-219ENST00000569136 NBPF10Q6P3W6 841 aaKnown RBP11.92□□□□□ -0.5
CAPN3-219ENST00000569136 DZIP3Q86Y13 1208 aaKnown RBP11.92□□□□□ -0.5
CAPN3-219ENST00000569136 NBPF15Q8N660 670 aa11.92□□□□□ -0.5
CAPN3-219ENST00000569136 SETDB2Q96T68 719 aa11.92□□□□□ -0.5
CAPN3-219ENST00000569136 HCSTQ9UBK5 93 aa11.92□□□□□ -0.5
CAPN3-219ENST00000569136 ZNF652Q9Y2D9 606 aa11.92□□□□□ -0.5
CAPN3-219ENST00000569136 CASZ1Q86V15 1759 aa11.92□□□□□ -0.5
CAPN3-219ENST00000569136 SCN11AQ9UI33 1791 aa11.92□□□□□ -0.5
CAPN3-219ENST00000569136 ZNF831Q5JPB2 1677 aa11.91□□□□□ -0.5
CAPN3-219ENST00000569136 ERVV-1B6SEH8 477 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms