RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 SREBF2Q12772 1141 aa13.19□□□□□ -0.3
CAPN3-216ENST00000567071 KIF7Q2M1P5 1343 aa13.18□□□□□ -0.3
CAPN3-216ENST00000567071 RGL2O15211 777 aa13.18□□□□□ -0.3
CAPN3-216ENST00000567071 TBC1D10BQ4KMP7 808 aaPredicted RBP13.18□□□□□ -0.3
CAPN3-216ENST00000567071 FMNL2Q96PY5 1086 aa13.18□□□□□ -0.3
CAPN3-216ENST00000567071 HTTP42858 3142 aa13.17□□□□□ -0.3
CAPN3-216ENST00000567071 HOXA10P31260 410 aaPredicted RBP13.17□□□□□ -0.3
CAPN3-216ENST00000567071 TEFQ10587 303 aa13.17□□□□□ -0.3
CAPN3-216ENST00000567071 ZNF790Q6PG37 636 aa13.17□□□□□ -0.3
CAPN3-216ENST00000567071 SAMD7Q7Z3H4 446 aa13.17□□□□□ -0.3
CAPN3-216ENST00000567071 DPF2Q92785 391 aa13.17□□□□□ -0.3
CAPN3-216ENST00000567071 CRAMP1Q96RY5 1269 aa13.17□□□□□ -0.3
CAPN3-216ENST00000567071 RBM27Q9P2N5 1060 aaKnown RBP13.17□□□□□ -0.3
CAPN3-216ENST00000567071 CENPFP49454 3210 aa13.17□□□□□ -0.3
CAPN3-216ENST00000567071 RANBP2P49792 3224 aaKnown RBP13.16□□□□□ -0.3
CAPN3-216ENST00000567071 TM4SF4P48230 202 aa13.16□□□□□ -0.3
CAPN3-216ENST00000567071 OTOP1Q7RTM1 612 aa13.16□□□□□ -0.3
CAPN3-216ENST00000567071 CDCA5Q96FF9 252 aa13.16□□□□□ -0.3
CAPN3-216ENST00000567071 CFHR5Q9BXR6 569 aa13.16□□□□□ -0.3
CAPN3-216ENST00000567071 RIC1Q4ADV7 1423 aa13.15□□□□□ -0.3
CAPN3-216ENST00000567071 SHTN1A0MZ66 631 aa13.15□□□□□ -0.3
CAPN3-216ENST00000567071 PRAMEF22A3QJZ6 481 aa13.15□□□□□ -0.3
CAPN3-216ENST00000567071 ALDH1A1P00352 501 aa13.15□□□□□ -0.3
CAPN3-216ENST00000567071 RBM26Q5T8P6 1007 aaKnown RBP13.15□□□□□ -0.3
CAPN3-216ENST00000567071 DPP8Q6V1X1 898 aaPredicted RBP13.15□□□□□ -0.3
CAPN3-216ENST00000567071 KIAA2012Q0VF49 1180 aa13.14□□□□□ -0.31
CAPN3-216ENST00000567071 ANKRD13DQ6ZTN6 518 aa13.14□□□□□ -0.31
CAPN3-216ENST00000567071 ARMC5Q96C12 935 aa13.14□□□□□ -0.31
CAPN3-216ENST00000567071 RTFDC1Q9BY42 306 aaPredicted RBP13.14□□□□□ -0.31
CAPN3-216ENST00000567071 GGA3Q9NZ52 723 aa13.14□□□□□ -0.31
CAPN3-216ENST00000567071 CLSPNQ9HAW4 1339 aa13.13□□□□□ -0.31
CAPN3-216ENST00000567071 ABCC12Q96J65 1359 aa13.13□□□□□ -0.31
CAPN3-216ENST00000567071 RPS12P25398 132 aaKnown RBP13.13□□□□□ -0.31
CAPN3-216ENST00000567071 SLC4A8Q2Y0W8 1093 aa13.13□□□□□ -0.31
CAPN3-216ENST00000567071 NUTM1Q86Y26 1132 aa13.13□□□□□ -0.31
CAPN3-216ENST00000567071 ERO1AQ96HE7 468 aa13.13□□□□□ -0.31
CAPN3-216ENST00000567071 PTPN22Q9Y2R2 807 aa13.13□□□□□ -0.31
CAPN3-216ENST00000567071 ZBTB12Q9Y330 459 aaPredicted RBP13.13□□□□□ -0.31
CAPN3-216ENST00000567071 ATP6V0A2Q9Y487 856 aa13.13□□□□□ -0.31
CAPN3-216ENST00000567071 PIP4K2AP48426 406 aaPredicted RBP13.12□□□□□ -0.31
CAPN3-216ENST00000567071 KIF4BQ2VIQ3 1234 aa13.12□□□□□ -0.31
CAPN3-216ENST00000567071 NBPF11Q86T75 865 aa13.12□□□□□ -0.31
CAPN3-216ENST00000567071 MPNDQ8N594 471 aa13.12□□□□□ -0.31
CAPN3-216ENST00000567071 COL25A1Q9BXS0 654 aaPredicted RBP13.12□□□□□ -0.31
CAPN3-216ENST00000567071 BRCA2P51587 3418 aa13.11□□□□□ -0.31
CAPN3-216ENST00000567071 TCIRG1Q13488 830 aa13.11□□□□□ -0.31
CAPN3-216ENST00000567071 TTLL12Q14166 644 aaPredicted RBP13.11□□□□□ -0.31
CAPN3-216ENST00000567071 DPF3Q92784 378 aa13.11□□□□□ -0.31
CAPN3-216ENST00000567071 PSMD14O00487 310 aa13.1□□□□□ -0.31
CAPN3-216ENST00000567071 EFCC1Q9HA90 598 aa13.1□□□□□ -0.31
CAPN3-216ENST00000567071 A0A1W2PPC1 479 aa13.09□□□□□ -0.31
CAPN3-216ENST00000567071 EGFRP00533 1210 aa13.09□□□□□ -0.31
CAPN3-216ENST00000567071 MKRN3Q13064 507 aaKnown RBP13.09□□□□□ -0.31
CAPN3-216ENST00000567071 MTHFSDQ2M296 383 aaKnown RBP13.09□□□□□ -0.31
CAPN3-216ENST00000567071 YDJCA8MPS7 323 aa13.08□□□□□ -0.32
CAPN3-216ENST00000567071 UBE2Q2LH0YL09 131 aa13.08□□□□□ -0.32
CAPN3-216ENST00000567071 NF2P35240 595 aa13.08□□□□□ -0.32
CAPN3-216ENST00000567071 SLC9C1Q4G0N8 1177 aa13.08□□□□□ -0.32
CAPN3-216ENST00000567071 SLC51AQ86UW1 340 aa13.08□□□□□ -0.32
CAPN3-216ENST00000567071 ZNF333Q96JL9 665 aa13.08□□□□□ -0.32
CAPN3-216ENST00000567071 NLRP3Q96P20 1036 aa13.08□□□□□ -0.32
CAPN3-216ENST00000567071 R3HDMLQ9H3Y0 253 aa13.08□□□□□ -0.32
CAPN3-216ENST00000567071 NR2E3Q9Y5X4 410 aa13.08□□□□□ -0.32
CAPN3-216ENST00000567071 UNC80Q8N2C7 3258 aa13.08□□□□□ -0.32
CAPN3-216ENST00000567071 IBTKQ9P2D0 1353 aaPredicted RBP13.07□□□□□ -0.32
CAPN3-216ENST00000567071 IL13P35225 146 aa13.07□□□□□ -0.32
CAPN3-216ENST00000567071 INHBEP58166 350 aa13.07□□□□□ -0.32
CAPN3-216ENST00000567071 ARHGEF6Q15052 776 aa13.07□□□□□ -0.32
CAPN3-216ENST00000567071 HLFQ16534 295 aa13.07□□□□□ -0.32
CAPN3-216ENST00000567071 SP8Q8IXZ3 490 aa13.07□□□□□ -0.32
CAPN3-216ENST00000567071 USP16Q9Y5T5 823 aa13.07□□□□□ -0.32
CAPN3-216ENST00000567071 ZNF609O15014 1411 aa13.06□□□□□ -0.32
CAPN3-216ENST00000567071 BBOX1O75936 387 aa13.06□□□□□ -0.32
CAPN3-216ENST00000567071 HMOX1P09601 288 aa13.06□□□□□ -0.32
CAPN3-216ENST00000567071 ANGEL2Q5VTE6 544 aaKnown RBP13.06□□□□□ -0.32
CAPN3-216ENST00000567071 CD99L2Q8TCZ2 262 aa13.06□□□□□ -0.32
CAPN3-216ENST00000567071 HTATIP2Q9BUP3 242 aa13.06□□□□□ -0.32
CAPN3-216ENST00000567071 PRDM6Q9NQX0 595 aa13.06□□□□□ -0.32
CAPN3-216ENST00000567071 STXBP5LQ9Y2K9 1186 aa13.06□□□□□ -0.32
CAPN3-216ENST00000567071 SIPA1L3O60292 1781 aaPredicted RBP13.06□□□□□ -0.32
CAPN3-216ENST00000567071 BTBD11A6QL63 1104 aa13.05□□□□□ -0.32
CAPN3-216ENST00000567071 SNRPA1P09661 255 aaKnown RBP13.05□□□□□ -0.32
CAPN3-216ENST00000567071 MOB2Q70IA6 237 aa13.05□□□□□ -0.32
CAPN3-216ENST00000567071 NUP98P52948 1817 aa13.04□□□□□ -0.32
CAPN3-216ENST00000567071 MANSC4A6NHS7 340 aaPredicted RBP13.04□□□□□ -0.32
CAPN3-216ENST00000567071 GNAT3A8MTJ3 354 aa13.04□□□□□ -0.32
CAPN3-216ENST00000567071 WASHC4Q2M389 1173 aa13.04□□□□□ -0.32
CAPN3-216ENST00000567071 MORC1Q86VD1 984 aa13.04□□□□□ -0.32
CAPN3-216ENST00000567071 DEFB123Q8N688 67 aa13.04□□□□□ -0.32
CAPN3-216ENST00000567071 LRCH3Q96II8 777 aa13.04□□□□□ -0.32
CAPN3-216ENST00000567071 ABCC4O15439 1325 aa13.04□□□□□ -0.32
CAPN3-216ENST00000567071 DDX60Q8IY21 1712 aaKnown RBP13.04□□□□□ -0.32
CAPN3-216ENST00000567071 ERVV-1B6SEH8 477 aa13.03□□□□□ -0.32
CAPN3-216ENST00000567071 GPTP24298 496 aa13.03□□□□□ -0.32
CAPN3-216ENST00000567071 SCARF1Q14162 830 aa13.03□□□□□ -0.32
CAPN3-216ENST00000567071 OTUD7BQ6GQQ9 843 aa13.03□□□□□ -0.32
CAPN3-216ENST00000567071 GPR153Q6NV75 609 aa13.03□□□□□ -0.32
CAPN3-216ENST00000567071 KIF6Q6ZMV9 814 aa13.03□□□□□ -0.32
CAPN3-216ENST00000567071 ARMC9Q7Z3E5 817 aa13.03□□□□□ -0.32
CAPN3-216ENST00000567071 PPP1R42Q7Z4L9 355 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms