RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 BNIP3LO60238 219 aa6.77□□□□□ -1.33
LINC00561-201ENST00000565815 GTPBP3Q969Y2 492 aaKnown RBP6.77□□□□□ -1.33
LINC00561-201ENST00000565815 TRIM47Q96LD4 638 aa6.77□□□□□ -1.33
LINC00561-201ENST00000565815 KANSL3Q9P2N6 904 aa6.77□□□□□ -1.33
LINC00561-201ENST00000565815 MAPKBP1O60336 1514 aa6.77□□□□□ -1.33
LINC00561-201ENST00000565815 ABCA10Q8WWZ4 1543 aa6.77□□□□□ -1.33
LINC00561-201ENST00000565815 CDC14CA4D256 554 aa6.77□□□□□ -1.33
LINC00561-201ENST00000565815 FMR1Q06787 632 aaKnown RBP eCLIP6.77□□□□□ -1.33
LINC00561-201ENST00000565815 KIF13AQ9H1H9 1805 aa6.76□□□□□ -1.33
LINC00561-201ENST00000565815 PNMA6FA0A0J9YX94 578 aa6.76□□□□□ -1.33
LINC00561-201ENST00000565815 KHNYNO15037 678 aaKnown RBP6.76□□□□□ -1.33
LINC00561-201ENST00000565815 ACPPP15309 386 aa6.76□□□□□ -1.33
LINC00561-201ENST00000565815 MZF1P28698 734 aaPredicted RBP6.76□□□□□ -1.33
LINC00561-201ENST00000565815 ZNF837Q96EG3 531 aaPredicted RBP6.76□□□□□ -1.33
LINC00561-201ENST00000565815 CRISPLD1Q9H336 500 aa6.76□□□□□ -1.33
LINC00561-201ENST00000565815 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.76□□□□□ -1.33
LINC00561-201ENST00000565815 CEP170Q5SW79 1584 aa6.76□□□□□ -1.33
LINC00561-201ENST00000565815 TRPA1O75762 1119 aa6.76□□□□□ -1.33
LINC00561-201ENST00000565815 SASH3O75995 380 aa6.76□□□□□ -1.33
LINC00561-201ENST00000565815 LATS2Q9NRM7 1088 aa6.76□□□□□ -1.33
LINC00561-201ENST00000565815 CNTN3Q9P232 1028 aa6.76□□□□□ -1.33
LINC00561-201ENST00000565815 ZFATQ9P243 1243 aa6.76□□□□□ -1.33
LINC00561-201ENST00000565815 GRIN2AQ12879 1464 aa6.75□□□□□ -1.33
LINC00561-201ENST00000565815 C11orf95C9JLR9 678 aaPredicted RBP6.75□□□□□ -1.33
LINC00561-201ENST00000565815 SLC30A3Q99726 388 aa6.75□□□□□ -1.33
LINC00561-201ENST00000565815 GJA3Q9Y6H8 435 aa6.75□□□□□ -1.33
LINC00561-201ENST00000565815 ABCA5Q8WWZ7 1642 aa6.75□□□□□ -1.33
LINC00561-201ENST00000565815 RBM47A0AV96 593 aaKnown RBP6.75□□□□□ -1.33
LINC00561-201ENST00000565815 UBAP1LF5GYI3 381 aa6.74□□□□□ -1.33
LINC00561-201ENST00000565815 XYLBO75191 536 aa6.74□□□□□ -1.33
LINC00561-201ENST00000565815 TNFRSF21O75509 655 aa6.74□□□□□ -1.33
LINC00561-201ENST00000565815 MAPTP10636 758 aaKnown RBP6.74□□□□□ -1.33
LINC00561-201ENST00000565815 ARSDP51689 593 aa6.74□□□□□ -1.33
LINC00561-201ENST00000565815 C1orf127Q8N9H9 656 aa6.74□□□□□ -1.33
LINC00561-201ENST00000565815 EPS8L3Q8TE67 593 aaKnown RBP6.74□□□□□ -1.33
LINC00561-201ENST00000565815 NUCKS1Q9H1E3 243 aaKnown RBP6.74□□□□□ -1.33
LINC00561-201ENST00000565815 FHAD1B1AJZ9 1412 aa6.74□□□□□ -1.33
LINC00561-201ENST00000565815 ITGA6P23229 1130 aa6.74□□□□□ -1.33
LINC00561-201ENST00000565815 WDR44Q5JSH3 913 aa6.74□□□□□ -1.33
LINC00561-201ENST00000565815 DUSP9Q99956 384 aaKnown RBP6.74□□□□□ -1.33
LINC00561-201ENST00000565815 EIF1AYO14602 144 aaKnown RBP6.73□□□□□ -1.33
LINC00561-201ENST00000565815 EREGO14944 169 aa6.73□□□□□ -1.33
LINC00561-201ENST00000565815 ZSCAN29Q8IWY8 852 aaPredicted RBP6.73□□□□□ -1.33
LINC00561-201ENST00000565815 PGBD3Q8N328 593 aa6.73□□□□□ -1.33
LINC00561-201ENST00000565815 CHRDQ9H2X0 955 aa6.73□□□□□ -1.33
LINC00561-201ENST00000565815 KDM6BO15054 1643 aa6.73□□□□□ -1.33
LINC00561-201ENST00000565815 EFSO43281 561 aa6.73□□□□□ -1.33
LINC00561-201ENST00000565815 LDHBP07195 334 aaKnown RBP6.73□□□□□ -1.33
LINC00561-201ENST00000565815 EAPPQ56P03 285 aaPredicted RBP6.73□□□□□ -1.33
LINC00561-201ENST00000565815 ZNF438Q7Z4V0 828 aa6.73□□□□□ -1.33
LINC00561-201ENST00000565815 LDLRAD1Q5T700 205 aa6.72□□□□□ -1.33
LINC00561-201ENST00000565815 COL13A1Q5TAT6 717 aaPredicted RBP6.72□□□□□ -1.33
LINC00561-201ENST00000565815 NEUROD4Q9HD90 331 aa6.72□□□□□ -1.33
LINC00561-201ENST00000565815 NPHS2Q9NP85 383 aa6.72□□□□□ -1.33
LINC00561-201ENST00000565815 CUX1P39880 1505 aa6.72□□□□□ -1.33
LINC00561-201ENST00000565815 ADAMTS12P58397 1594 aa6.72□□□□□ -1.33
LINC00561-201ENST00000565815 RECKO95980 971 aa6.72□□□□□ -1.33
LINC00561-201ENST00000565815 IER5Q5VY09 327 aa6.72□□□□□ -1.33
LINC00561-201ENST00000565815 ALKBH2Q6NS38 261 aa6.72□□□□□ -1.33
LINC00561-201ENST00000565815 ATXN7O15265 892 aaPredicted RBP6.71□□□□□ -1.33
LINC00561-201ENST00000565815 CTBSQ01459 385 aa6.71□□□□□ -1.33
LINC00561-201ENST00000565815 C9orf131Q5VYM1 1079 aa6.71□□□□□ -1.33
LINC00561-201ENST00000565815 ADAMTSL4Q6UY14 1074 aa6.71□□□□□ -1.33
LINC00561-201ENST00000565815 HHIPQ96QV1 700 aa6.71□□□□□ -1.33
LINC00561-201ENST00000565815 ELP3Q9H9T3 547 aa6.71□□□□□ -1.33
LINC00561-201ENST00000565815 PARP2Q9UGN5 583 aa6.71□□□□□ -1.33
LINC00561-201ENST00000565815 C2CD2LO14523 706 aa6.71□□□□□ -1.34
LINC00561-201ENST00000565815 MLLT1Q03111 559 aaPredicted RBP6.71□□□□□ -1.34
LINC00561-201ENST00000565815 TNP2Q05952 138 aa6.71□□□□□ -1.34
LINC00561-201ENST00000565815 VWA5B2Q8N398 1253 aa6.71□□□□□ -1.34
LINC00561-201ENST00000565815 GPR161Q8N6U8 529 aaKnown RBP6.71□□□□□ -1.34
LINC00561-201ENST00000565815 NDFIP2Q9NV92 336 aa6.71□□□□□ -1.34
LINC00561-201ENST00000565815 ERICH3Q5RHP9 1530 aa6.71□□□□□ -1.34
LINC00561-201ENST00000565815 PPFIA3O75145 1194 aa6.7□□□□□ -1.34
LINC00561-201ENST00000565815 NFKB1P19838 968 aa6.7□□□□□ -1.34
LINC00561-201ENST00000565815 EFHC2Q5JST6 749 aa6.7□□□□□ -1.34
LINC00561-201ENST00000565815 PIK3R5Q8WYR1 880 aa6.7□□□□□ -1.34
LINC00561-201ENST00000565815 NSUN5Q96P11 429 aaKnown RBP6.7□□□□□ -1.34
LINC00561-201ENST00000565815 IGFLR1Q9H665 355 aa6.7□□□□□ -1.34
LINC00561-201ENST00000565815 AMOTL2Q9Y2J4 779 aa6.7□□□□□ -1.34
LINC00561-201ENST00000565815 DIP2BQ9P265 1576 aa6.7□□□□□ -1.34
LINC00561-201ENST00000565815 MMP20O60882 483 aa6.7□□□□□ -1.34
LINC00561-201ENST00000565815 TSNAXIP1Q2TAA8 658 aa6.7□□□□□ -1.34
LINC00561-201ENST00000565815 BHMTQ93088 406 aa6.7□□□□□ -1.34
LINC00561-201ENST00000565815 PLCB3Q01970 1234 aa6.7□□□□□ -1.34
LINC00561-201ENST00000565815 LCE2CQ5TA81 110 aa6.7□□□□□ -1.34
LINC00561-201ENST00000565815 HFE2Q6ZVN8 426 aa6.7□□□□□ -1.34
LINC00561-201ENST00000565815 GSX2Q9BZM3 304 aa6.7□□□□□ -1.34
LINC00561-201ENST00000565815 ENOX2Q16206 610 aaKnown RBP6.69□□□□□ -1.34
LINC00561-201ENST00000565815 BACH2Q9BYV9 841 aa6.69□□□□□ -1.34
LINC00561-201ENST00000565815 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.69□□□□□ -1.34
LINC00561-201ENST00000565815 RNFT1Q5M7Z0 435 aa6.69□□□□□ -1.34
LINC00561-201ENST00000565815 OSBPL7Q9BZF2 842 aa6.69□□□□□ -1.34
LINC00561-201ENST00000565815 WRNQ14191 1432 aaPredicted RBP eCLIP6.69□□□□□ -1.34
LINC00561-201ENST00000565815 F6X3S4 739 aa6.68□□□□□ -1.34
LINC00561-201ENST00000565815 GLI2P10070 1586 aa6.68□□□□□ -1.34
LINC00561-201ENST00000565815 PCBP4P57723 403 aaKnown RBP6.68□□□□□ -1.34
LINC00561-201ENST00000565815 GAS6Q14393 721 aa6.68□□□□□ -1.34
LINC00561-201ENST00000565815 ERBB4Q15303 1308 aa6.68□□□□□ -1.34
LINC00561-201ENST00000565815 PEAR1Q5VY43 1037 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms