RNA–Protein interactions for RNA: ENST00000565796.5

CDH16-204, Transcript of cadherin 16, humanhuman

TSL 2 BASIC

Gene CDH16, Length 2,694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-204ENST00000565796 UBE3BQ7Z3V4 1068 aa17.14■□□□□ 0.34
CDH16-204ENST00000565796 RASEFQ8IZ41 740 aa17.14■□□□□ 0.34
CDH16-204ENST00000565796 LSG1Q9H089 658 aaKnown RBP17.14■□□□□ 0.34
CDH16-204ENST00000565796 HDAC5Q9UQL6 1122 aa17.14■□□□□ 0.34
CDH16-204ENST00000565796 APBA3O96018 575 aa17.14■□□□□ 0.33
CDH16-204ENST00000565796 XRCC6P12956 609 aaKnown RBP eCLIP17.14■□□□□ 0.33
CDH16-204ENST00000565796 MCTP1Q6DN14 999 aa17.14■□□□□ 0.33
CDH16-204ENST00000565796 ERC1Q8IUD2 1116 aa17.14■□□□□ 0.33
CDH16-204ENST00000565796 NUCB2P80303 420 aa17.14■□□□□ 0.33
CDH16-204ENST00000565796 DZIP3Q86Y13 1208 aaKnown RBP17.14■□□□□ 0.33
CDH16-204ENST00000565796 PANK2Q9BZ23 570 aa17.14■□□□□ 0.33
CDH16-204ENST00000565796 MAP3K15Q6ZN16 1313 aa17.13■□□□□ 0.33
CDH16-204ENST00000565796 RAD50Q92878 1312 aa17.13■□□□□ 0.33
CDH16-204ENST00000565796 LARP6Q9BRS8 491 aaKnown RBP17.13■□□□□ 0.33
CDH16-204ENST00000565796 NUP188Q5SRE5 1749 aa17.13■□□□□ 0.33
CDH16-204ENST00000565796 CNTNAP4Q9C0A0 1308 aa17.13■□□□□ 0.33
CDH16-204ENST00000565796 CWC22Q9HCG8 908 aaKnown RBP17.13■□□□□ 0.33
CDH16-204ENST00000565796 DIAPH3Q9NSV4 1193 aa17.13■□□□□ 0.33
CDH16-204ENST00000565796 RREB1Q92766 1687 aa17.12■□□□□ 0.33
CDH16-204ENST00000565796 CLEC17AQ6ZS10 378 aa17.12■□□□□ 0.33
CDH16-204ENST00000565796 SMIM5Q71RC9 77 aa17.12■□□□□ 0.33
CDH16-204ENST00000565796 SNX14Q9Y5W7 946 aa17.12■□□□□ 0.33
CDH16-204ENST00000565796 TAF1LQ8IZX4 1826 aa17.12■□□□□ 0.33
CDH16-204ENST00000565796 PTH1RQ03431 593 aa17.12■□□□□ 0.33
CDH16-204ENST00000565796 HLFQ16534 295 aa17.12■□□□□ 0.33
CDH16-204ENST00000565796 A0A087WZG4 1122 aa17.11■□□□□ 0.33
CDH16-204ENST00000565796 GNPATO15228 680 aa17.11■□□□□ 0.33
CDH16-204ENST00000565796 CPA1P15085 419 aa17.11■□□□□ 0.33
CDH16-204ENST00000565796 L1TD1Q5T7N2 865 aaKnown RBP17.11■□□□□ 0.33
CDH16-204ENST00000565796 RC3H1Q5TC82 1133 aaKnown RBP17.11■□□□□ 0.33
CDH16-204ENST00000565796 BOLA2Q9H3K6 86 aa17.11■□□□□ 0.33
CDH16-204ENST00000565796 TXNRD1Q16881 649 aa17.11■□□□□ 0.33
CDH16-204ENST00000565796 SLC27A3Q5K4L6 730 aa17.11■□□□□ 0.33
CDH16-204ENST00000565796 KIAA1211Q6ZU35 1233 aa17.11■□□□□ 0.33
CDH16-204ENST00000565796 PROM2Q8N271 834 aa17.11■□□□□ 0.33
CDH16-204ENST00000565796 GPATCH3Q96I76 525 aa17.11■□□□□ 0.33
CDH16-204ENST00000565796 COL15A1P39059 1388 aa17.1■□□□□ 0.33
CDH16-204ENST00000565796 AFDNP55196 1824 aaKnown RBP17.1■□□□□ 0.33
CDH16-204ENST00000565796 GAS2L3Q86XJ1 694 aa17.1■□□□□ 0.33
CDH16-204ENST00000565796 FAM227BQ96M60 508 aa17.1■□□□□ 0.33
CDH16-204ENST00000565796 PLSCR1O15162 318 aa17.1■□□□□ 0.33
CDH16-204ENST00000565796 GIGYF2Q6Y7W6 1299 aaKnown RBP17.1■□□□□ 0.33
CDH16-204ENST00000565796 TCIRG1Q13488 830 aa17.09■□□□□ 0.33
CDH16-204ENST00000565796 CUL4AQ13619 759 aa17.09■□□□□ 0.33
CDH16-204ENST00000565796 EDC3Q96F86 508 aaKnown RBP17.09■□□□□ 0.33
CDH16-204ENST00000565796 GOLGA6L22H0YM25 854 aa17.09■□□□□ 0.33
CDH16-204ENST00000565796 DTNBO60941 627 aa17.09■□□□□ 0.33
CDH16-204ENST00000565796 MCM2P49736 904 aa17.09■□□□□ 0.33
CDH16-204ENST00000565796 IL17RAQ96F46 866 aa17.09■□□□□ 0.33
CDH16-204ENST00000565796 DDX49Q9Y6V7 483 aaKnown RBP17.09■□□□□ 0.33
CDH16-204ENST00000565796 C4BP0C0L5 1744 aa17.09■□□□□ 0.33
CDH16-204ENST00000565796 RPS6KA4O75676 772 aa17.08■□□□□ 0.33
CDH16-204ENST00000565796 RFX5P48382 616 aaPredicted RBP17.08■□□□□ 0.33
CDH16-204ENST00000565796 PTPN12Q05209 780 aaKnown RBP17.08■□□□□ 0.33
CDH16-204ENST00000565796 AK7Q96M32 723 aa17.08■□□□□ 0.33
CDH16-204ENST00000565796 RTCBQ9Y3I0 505 aaKnown RBP17.08■□□□□ 0.33
CDH16-204ENST00000565796 NDUFB9Q9Y6M9 179 aa17.08■□□□□ 0.33
CDH16-204ENST00000565796 ERVV-1B6SEH8 477 aa17.08■□□□□ 0.32
CDH16-204ENST00000565796 AMIGO3Q86WK7 504 aa17.08■□□□□ 0.32
CDH16-204ENST00000565796 EVI5LQ96CN4 794 aa17.08■□□□□ 0.32
CDH16-204ENST00000565796 GPTP24298 496 aa17.07■□□□□ 0.32
CDH16-204ENST00000565796 TFCP2Q12800 502 aa17.07■□□□□ 0.32
CDH16-204ENST00000565796 SKOR2Q2VWA4 1001 aaPredicted RBP17.07■□□□□ 0.32
CDH16-204ENST00000565796 CWC25Q9NXE8 425 aaPredicted RBP17.07■□□□□ 0.32
CDH16-204ENST00000565796 TNS1Q9HBL0 1735 aaKnown RBP17.07■□□□□ 0.32
CDH16-204ENST00000565796 CAMTA2O94983 1202 aa17.07■□□□□ 0.32
CDH16-204ENST00000565796 NMIQ13287 307 aaPredicted RBP17.07■□□□□ 0.32
CDH16-204ENST00000565796 PRPF40BQ6NWY9 871 aaKnown RBP17.07■□□□□ 0.32
CDH16-204ENST00000565796 CCDC191Q8NCU4 936 aa17.07■□□□□ 0.32
CDH16-204ENST00000565796 ISCA1Q9BUE6 129 aa17.07■□□□□ 0.32
CDH16-204ENST00000565796 LMBRD1Q9NUN5 540 aa17.07■□□□□ 0.32
CDH16-204ENST00000565796 NUP98P52948 1817 aa17.07■□□□□ 0.32
CDH16-204ENST00000565796 PHF14O94880 888 aa17.06■□□□□ 0.32
CDH16-204ENST00000565796 CASP7P55210 303 aa17.06■□□□□ 0.32
CDH16-204ENST00000565796 ADCK5Q3MIX3 580 aa17.06■□□□□ 0.32
CDH16-204ENST00000565796 PRPF40AO75400 957 aaKnown RBP17.06■□□□□ 0.32
CDH16-204ENST00000565796 NCLP19338 710 aaKnown RBP17.06■□□□□ 0.32
CDH16-204ENST00000565796 FOXD4L6Q3SYB3 417 aaPredicted RBP17.06■□□□□ 0.32
CDH16-204ENST00000565796 HSP90AB3PQ58FF7 597 aa17.06■□□□□ 0.32
CDH16-204ENST00000565796 LMBR1LQ6UX01 489 aa17.06■□□□□ 0.32
CDH16-204ENST00000565796 FOXD4L3Q6VB84 417 aaPredicted RBP17.06■□□□□ 0.32
CDH16-204ENST00000565796 COPRSQ9NQ92 184 aa17.06■□□□□ 0.32
CDH16-204ENST00000565796 CHMP3Q9Y3E7 222 aa17.06■□□□□ 0.32
CDH16-204ENST00000565796 EPB41L2O43491 1005 aaKnown RBP17.05■□□□□ 0.32
CDH16-204ENST00000565796 AK2P54819 239 aa17.05■□□□□ 0.32
CDH16-204ENST00000565796 COL9A3Q14050 684 aaPredicted RBP17.05■□□□□ 0.32
CDH16-204ENST00000565796 DBNLQ9UJU6 430 aaKnown RBP17.05■□□□□ 0.32
CDH16-204ENST00000565796 A0A0D9SFI3 127 aa17.05■□□□□ 0.32
CDH16-204ENST00000565796 CHGBP05060 677 aa17.05■□□□□ 0.32
CDH16-204ENST00000565796 CASTP20810 708 aaKnown RBP17.05■□□□□ 0.32
CDH16-204ENST00000565796 RUFY2Q8WXA3 655 aa17.05■□□□□ 0.32
CDH16-204ENST00000565796 TTC14Q96N46 770 aa17.05■□□□□ 0.32
CDH16-204ENST00000565796 RABL6Q3YEC7 729 aaPredicted RBP17.04■□□□□ 0.32
CDH16-204ENST00000565796 FSD1Q9BTV5 496 aa17.04■□□□□ 0.32
CDH16-204ENST00000565796 GRPEL1Q9HAV7 217 aa17.04■□□□□ 0.32
CDH16-204ENST00000565796 TRIM28Q13263 835 aaKnown RBP17.04■□□□□ 0.32
CDH16-204ENST00000565796 KLHL40Q2TBA0 621 aa17.04■□□□□ 0.32
CDH16-204ENST00000565796 RUFY3Q7L099 469 aa17.04■□□□□ 0.32
CDH16-204ENST00000565796 ARHGEF1Q92888 912 aaKnown RBP17.04■□□□□ 0.32
CDH16-204ENST00000565796 PTMSP20962 102 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms