RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 BIN1O00499 593 aa24.11■■□□□ 1.45
MAP1LC3B-206ENST00000564844 SASH1O94885 1247 aa24.11■■□□□ 1.45
MAP1LC3B-206ENST00000564844 LTKP29376 864 aa24.11■■□□□ 1.45
MAP1LC3B-206ENST00000564844 TTC41PQ6P2S7 1318 aa24.11■■□□□ 1.45
MAP1LC3B-206ENST00000564844 CHST3Q7LGC8 479 aa24.11■■□□□ 1.45
MAP1LC3B-206ENST00000564844 IGSF1Q8N6C5 1336 aa24.11■■□□□ 1.45
MAP1LC3B-206ENST00000564844 AOPEPQ8N6M6 819 aa24.11■■□□□ 1.45
MAP1LC3B-206ENST00000564844 FLT4P35916 1363 aa24.1■■□□□ 1.45
MAP1LC3B-206ENST00000564844 G3BP1Q13283 466 aaKnown RBP eCLIP24.1■■□□□ 1.45
MAP1LC3B-206ENST00000564844 ERCC6LQ2NKX8 1250 aa24.1■■□□□ 1.45
MAP1LC3B-206ENST00000564844 EPB41L2O43491 1005 aaKnown RBP24.1■■□□□ 1.45
MAP1LC3B-206ENST00000564844 Q6ZUG5 572 aa24.1■■□□□ 1.45
MAP1LC3B-206ENST00000564844 GOLPH3LQ9H4A5 285 aa24.1■■□□□ 1.45
MAP1LC3B-206ENST00000564844 ARHGEF10O15013 1369 aa24.1■■□□□ 1.45
MAP1LC3B-206ENST00000564844 TUBGCP6Q96RT7 1819 aa24.09■■□□□ 1.45
MAP1LC3B-206ENST00000564844 DNAJC2Q99543 621 aaKnown RBP24.09■■□□□ 1.45
MAP1LC3B-206ENST00000564844 NCOA5Q9HCD5 579 aaKnown RBP24.09■■□□□ 1.45
MAP1LC3B-206ENST00000564844 IQCB1Q15051 598 aa24.09■■□□□ 1.45
MAP1LC3B-206ENST00000564844 LRRC59Q96AG4 307 aaKnown RBP24.09■■□□□ 1.45
MAP1LC3B-206ENST00000564844 OVOS2A0A0J9YW53 1432 aa24.08■■□□□ 1.45
MAP1LC3B-206ENST00000564844 OVOS2Q6IE36 1432 aa24.08■■□□□ 1.45
MAP1LC3B-206ENST00000564844 MAP3K5Q99683 1374 aa24.08■■□□□ 1.45
MAP1LC3B-206ENST00000564844 ELP1O95163 1332 aa24.08■■□□□ 1.45
MAP1LC3B-206ENST00000564844 KRT222Q8N1A0 295 aa24.08■■□□□ 1.45
MAP1LC3B-206ENST00000564844 RNF20Q5VTR2 975 aa24.08■■□□□ 1.45
MAP1LC3B-206ENST00000564844 BICC1Q9H694 974 aaKnown RBP24.08■■□□□ 1.45
MAP1LC3B-206ENST00000564844 HOXC9P31274 260 aa24.07■■□□□ 1.44
MAP1LC3B-206ENST00000564844 ME1P48163 572 aa24.07■■□□□ 1.44
MAP1LC3B-206ENST00000564844 EIF4A1P60842 406 aaKnown RBP24.07■■□□□ 1.44
MAP1LC3B-206ENST00000564844 TEFQ10587 303 aa24.07■■□□□ 1.44
MAP1LC3B-206ENST00000564844 TERF2Q15554 542 aa24.07■■□□□ 1.44
MAP1LC3B-206ENST00000564844 AMOTL2Q9Y2J4 779 aa24.07■■□□□ 1.44
MAP1LC3B-206ENST00000564844 USP6P35125 1406 aa24.07■■□□□ 1.44
MAP1LC3B-206ENST00000564844 RBM6P78332 1123 aaKnown RBP24.07■■□□□ 1.44
MAP1LC3B-206ENST00000564844 SUCLG2Q96I99 432 aa24.07■■□□□ 1.44
MAP1LC3B-206ENST00000564844 SYT10Q6XYQ8 523 aa24.07■■□□□ 1.44
MAP1LC3B-206ENST00000564844 KLHL34Q8N239 644 aa24.07■■□□□ 1.44
MAP1LC3B-206ENST00000564844 TMX1Q9H3N1 280 aa24.07■■□□□ 1.44
MAP1LC3B-206ENST00000564844 NEO1Q92859 1461 aa24.06■■□□□ 1.44
MAP1LC3B-206ENST00000564844 BTBD11A6QL63 1104 aa24.06■■□□□ 1.44
MAP1LC3B-206ENST00000564844 SMC2O95347 1197 aa24.06■■□□□ 1.44
MAP1LC3B-206ENST00000564844 OTUD7BQ6GQQ9 843 aa24.06■■□□□ 1.44
MAP1LC3B-206ENST00000564844 RAB11FIP4Q86YS3 637 aa24.06■■□□□ 1.44
MAP1LC3B-206ENST00000564844 FAM177A1Q8N128 213 aaPredicted RBP24.06■■□□□ 1.44
MAP1LC3B-206ENST00000564844 ZNF397Q8NF99 534 aaPredicted RBP24.05■■□□□ 1.44
MAP1LC3B-206ENST00000564844 MORC2Q9Y6X9 1032 aaPredicted RBP24.05■■□□□ 1.44
MAP1LC3B-206ENST00000564844 RESTQ13127 1097 aa24.05■■□□□ 1.44
MAP1LC3B-206ENST00000564844 USP28Q96RU2 1077 aa24.05■■□□□ 1.44
MAP1LC3B-206ENST00000564844 SDF4Q9BRK5 362 aa24.05■■□□□ 1.44
MAP1LC3B-206ENST00000564844 RIMBP3CA6NJZ7 1639 aa24.05■■□□□ 1.44
MAP1LC3B-206ENST00000564844 RIMBP3BA6NNM3 1639 aa24.05■■□□□ 1.44
MAP1LC3B-206ENST00000564844 RIMBP3Q9UFD9 1639 aa24.05■■□□□ 1.44
MAP1LC3B-206ENST00000564844 PLEKHG3A1L390 1219 aa24.04■■□□□ 1.44
MAP1LC3B-206ENST00000564844 SBNO1A3KN83 1393 aa24.04■■□□□ 1.44
MAP1LC3B-206ENST00000564844 A0A1B0GVL5 298 aa24.04■■□□□ 1.44
MAP1LC3B-206ENST00000564844 A0A0G2JLW4 131 aa24.04■■□□□ 1.44
MAP1LC3B-206ENST00000564844 KINO60870 393 aaKnown RBP24.04■■□□□ 1.44
MAP1LC3B-206ENST00000564844 GTF2E1P29083 439 aaPredicted RBP24.03■■□□□ 1.44
MAP1LC3B-206ENST00000564844 CCZ1BP86790 482 aa24.03■■□□□ 1.44
MAP1LC3B-206ENST00000564844 CCZ1P86791 482 aaPredicted RBP24.03■■□□□ 1.44
MAP1LC3B-206ENST00000564844 CCDC73Q6ZRK6 1079 aa24.03■■□□□ 1.44
MAP1LC3B-206ENST00000564844 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.03■■□□□ 1.44
MAP1LC3B-206ENST00000564844 FSIP1Q8NA03 581 aa24.03■■□□□ 1.44
MAP1LC3B-206ENST00000564844 ADCY9O60503 1353 aa24.03■■□□□ 1.44
MAP1LC3B-206ENST00000564844 POLR3GO15318 223 aaPredicted RBP24.03■■□□□ 1.44
MAP1LC3B-206ENST00000564844 APOBRQ0VD83 1088 aa24.03■■□□□ 1.44
MAP1LC3B-206ENST00000564844 SCRN1Q12765 414 aa24.03■■□□□ 1.44
MAP1LC3B-206ENST00000564844 CCAR2Q8N163 923 aaKnown RBP24.03■■□□□ 1.44
MAP1LC3B-206ENST00000564844 NEK1Q96PY6 1258 aa24.03■■□□□ 1.44
MAP1LC3B-206ENST00000564844 DDX46Q7L014 1031 aaKnown RBP24.02■■□□□ 1.44
MAP1LC3B-206ENST00000564844 EPC1Q9H2F5 836 aa24.02■■□□□ 1.44
MAP1LC3B-206ENST00000564844 ZNF446Q9NWS9 450 aa24.02■■□□□ 1.44
MAP1LC3B-206ENST00000564844 MYL6BP14649 208 aa24.02■■□□□ 1.44
MAP1LC3B-206ENST00000564844 GOLGA8FQ08AF8 430 aa24.02■■□□□ 1.44
MAP1LC3B-206ENST00000564844 GOLGA8DPQ0D2H9 430 aa24.02■■□□□ 1.44
MAP1LC3B-206ENST00000564844 ANKRD1Q15327 319 aa24.02■■□□□ 1.44
MAP1LC3B-206ENST00000564844 TMC6Q7Z403 805 aa24.02■■□□□ 1.44
MAP1LC3B-206ENST00000564844 HOMER1Q86YM7 354 aa24.02■■□□□ 1.44
MAP1LC3B-206ENST00000564844 GABPB1Q06547 395 aaPredicted RBP24.01■■□□□ 1.43
MAP1LC3B-206ENST00000564844 STX1AQ16623 288 aa24.01■■□□□ 1.43
MAP1LC3B-206ENST00000564844 DHX40Q8IX18 779 aaKnown RBP24.01■■□□□ 1.43
MAP1LC3B-206ENST00000564844 C3P01024 1663 aa24.01■■□□□ 1.43
MAP1LC3B-206ENST00000564844 KDRP35968 1356 aa24.01■■□□□ 1.43
MAP1LC3B-206ENST00000564844 TAF5LO75529 589 aa24■■□□□ 1.43
MAP1LC3B-206ENST00000564844 RBM43Q6ZSC3 357 aaKnown RBP24■■□□□ 1.43
MAP1LC3B-206ENST00000564844 TMEM51Q9NW97 253 aa24■■□□□ 1.43
MAP1LC3B-206ENST00000564844 XRN1Q8IZH2 1706 aaKnown RBP24■■□□□ 1.43
MAP1LC3B-206ENST00000564844 SLU7O95391 586 aaKnown RBP24■■□□□ 1.43
MAP1LC3B-206ENST00000564844 POLR3DP05423 398 aaPredicted RBP24■■□□□ 1.43
MAP1LC3B-206ENST00000564844 SNW1Q13573 536 aaKnown RBP24■■□□□ 1.43
MAP1LC3B-206ENST00000564844 HSP90AA4PQ58FG1 418 aa24■■□□□ 1.43
MAP1LC3B-206ENST00000564844 KCNB2Q92953 911 aa24■■□□□ 1.43
MAP1LC3B-206ENST00000564844 KAZALD1Q96I82 304 aa24■■□□□ 1.43
MAP1LC3B-206ENST00000564844 CDK11BP21127 795 aaKnown RBP23.99■■□□□ 1.43
MAP1LC3B-206ENST00000564844 HDGFP51858 240 aaKnown RBP23.99■■□□□ 1.43
MAP1LC3B-206ENST00000564844 NBPF6Q5VWK0 638 aa23.99■■□□□ 1.43
MAP1LC3B-206ENST00000564844 NYAP1Q6ZVC0 841 aa23.99■■□□□ 1.43
MAP1LC3B-206ENST00000564844 NBPF4Q96M43 638 aa23.99■■□□□ 1.43
MAP1LC3B-206ENST00000564844 GJB4Q9NTQ9 266 aa23.99■■□□□ 1.43
MAP1LC3B-206ENST00000564844 CFAP45Q9UL16 551 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms