RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 KCNQ4P56696 695 aa4.02□□□□□ -1.77
CHD9-209ENST00000564255 RACK1P63244 317 aaKnown RBP4.02□□□□□ -1.77
CHD9-209ENST00000564255 NLRP8Q86W28 1048 aa4.02□□□□□ -1.77
CHD9-209ENST00000564255 CAPN10Q9HC96 672 aa4.02□□□□□ -1.77
CHD9-209ENST00000564255 TAF1CQ15572 869 aaPredicted RBP4.01□□□□□ -1.77
CHD9-209ENST00000564255 ERMP1Q7Z2K6 904 aa4.01□□□□□ -1.77
CHD9-209ENST00000564255 NLRP13Q86W25 1043 aa4.01□□□□□ -1.77
CHD9-209ENST00000564255 C1orf127Q8N9H9 656 aa4.01□□□□□ -1.77
CHD9-209ENST00000564255 ANKRD24Q8TF21 1146 aa4.01□□□□□ -1.77
CHD9-209ENST00000564255 TTLL8A6PVC2 850 aa4.01□□□□□ -1.77
CHD9-209ENST00000564255 XYLBO75191 536 aa4.01□□□□□ -1.77
CHD9-209ENST00000564255 SMCPP49901 116 aaPredicted RBP4.01□□□□□ -1.77
CHD9-209ENST00000564255 LBRQ14739 615 aaKnown RBP4.01□□□□□ -1.77
CHD9-209ENST00000564255 GLIS3Q8NEA6 775 aa4.01□□□□□ -1.77
CHD9-209ENST00000564255 NPHS2Q9NP85 383 aa4.01□□□□□ -1.77
CHD9-209ENST00000564255 CUEDC1Q9NWM3 386 aaPredicted RBP4.01□□□□□ -1.77
CHD9-209ENST00000564255 DYRK1BQ9Y463 629 aa4.01□□□□□ -1.77
CHD9-209ENST00000564255 EREGO14944 169 aa4□□□□□ -1.77
CHD9-209ENST00000564255 POLR3DP05423 398 aaPredicted RBP4□□□□□ -1.77
CHD9-209ENST00000564255 USP17L7P0C7H9 530 aa4□□□□□ -1.77
CHD9-209ENST00000564255 RHOQP17081 205 aa4□□□□□ -1.77
CHD9-209ENST00000564255 ZNF394Q53GI3 561 aa4□□□□□ -1.77
CHD9-209ENST00000564255 HS2ST1Q7LGA3 356 aa4□□□□□ -1.77
CHD9-209ENST00000564255 TRIM46Q7Z4K8 759 aa4□□□□□ -1.77
CHD9-209ENST00000564255 BCO2Q9BYV7 579 aa4□□□□□ -1.77
CHD9-209ENST00000564255 CADPSQ9ULU8 1353 aa4□□□□□ -1.77
CHD9-209ENST00000564255 TNNI2P48788 182 aa4□□□□□ -1.77
CHD9-209ENST00000564255 GRM2Q14416 872 aa4□□□□□ -1.77
CHD9-209ENST00000564255 C6orf118Q5T5N4 469 aa4□□□□□ -1.77
CHD9-209ENST00000564255 PRPF40BQ6NWY9 871 aaKnown RBP4□□□□□ -1.77
CHD9-209ENST00000564255 USP48Q86UV5 1035 aa4□□□□□ -1.77
CHD9-209ENST00000564255 ABI2Q9NYB9 513 aaPredicted RBP4□□□□□ -1.77
CHD9-209ENST00000564255 F11P03951 625 aa4□□□□□ -1.77
CHD9-209ENST00000564255 ARSJQ5FYB0 599 aaPredicted RBP4□□□□□ -1.77
CHD9-209ENST00000564255 CEP63Q96MT8 703 aa4□□□□□ -1.77
CHD9-209ENST00000564255 TANGO6Q9C0B7 1094 aa4□□□□□ -1.77
CHD9-209ENST00000564255 PRKAG2Q9UGJ0 569 aa4□□□□□ -1.77
CHD9-209ENST00000564255 KCNH4Q9UQ05 1017 aa4□□□□□ -1.77
CHD9-209ENST00000564255 EFSO43281 561 aa3.99□□□□□ -1.77
CHD9-209ENST00000564255 GNL2Q13823 731 aaKnown RBP3.99□□□□□ -1.77
CHD9-209ENST00000564255 MEI1Q5TIA1 1274 aa3.99□□□□□ -1.77
CHD9-209ENST00000564255 NXPE4Q6UWF7 544 aa3.99□□□□□ -1.77
CHD9-209ENST00000564255 FAM177A1Q8N128 213 aaPredicted RBP3.99□□□□□ -1.77
CHD9-209ENST00000564255 GSX2Q9BZM3 304 aa3.99□□□□□ -1.77
CHD9-209ENST00000564255 ZCCHC2Q9C0B9 1178 aaKnown RBP3.99□□□□□ -1.77
CHD9-209ENST00000564255 RUBCNLQ9H714 662 aa3.99□□□□□ -1.77
CHD9-209ENST00000564255 SALL4Q9UJQ4 1053 aa3.99□□□□□ -1.77
CHD9-209ENST00000564255 A0A1W2PP55 124 aa3.99□□□□□ -1.77
CHD9-209ENST00000564255 THBS1P07996 1170 aa3.99□□□□□ -1.77
CHD9-209ENST00000564255 FAM157BP0CG42 384 aa3.99□□□□□ -1.77
CHD9-209ENST00000564255 HOXD8P13378 290 aaPredicted RBP3.99□□□□□ -1.77
CHD9-209ENST00000564255 MAP3K10Q02779 954 aa3.99□□□□□ -1.77
CHD9-209ENST00000564255 UBAP2LQ14157 1087 aaKnown RBP3.99□□□□□ -1.77
CHD9-209ENST00000564255 SCARF1Q14162 830 aa3.99□□□□□ -1.77
CHD9-209ENST00000564255 TTC39BQ5VTQ0 682 aaPredicted RBP3.99□□□□□ -1.77
CHD9-209ENST00000564255 BRD7Q9NPI1 651 aa3.99□□□□□ -1.77
CHD9-209ENST00000564255 GADD45BO75293 160 aaPredicted RBP3.98□□□□□ -1.77
CHD9-209ENST00000564255 GSTT1P30711 240 aa3.98□□□□□ -1.77
CHD9-209ENST00000564255 GJA8P48165 433 aa3.98□□□□□ -1.77
CHD9-209ENST00000564255 RBL2Q08999 1139 aa3.98□□□□□ -1.77
CHD9-209ENST00000564255 LAMC2Q13753 1193 aa3.98□□□□□ -1.77
CHD9-209ENST00000564255 C3orf58Q8NDZ4 430 aa3.98□□□□□ -1.77
CHD9-209ENST00000564255 OR13H1Q8NG92 308 aa3.98□□□□□ -1.77
CHD9-209ENST00000564255 RSRP1Q9BUV0 290 aa3.98□□□□□ -1.77
CHD9-209ENST00000564255 NOC4LQ9BVI4 516 aaKnown RBP3.98□□□□□ -1.77
CHD9-209ENST00000564255 TRAK1Q9UPV9 953 aa3.98□□□□□ -1.77
CHD9-209ENST00000564255 GJA3Q9Y6H8 435 aa3.98□□□□□ -1.77
CHD9-209ENST00000564255 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.98□□□□□ -1.77
CHD9-209ENST00000564255 ATP2B1P20020 1258 aa3.98□□□□□ -1.77
CHD9-209ENST00000564255 CCINQ13939 588 aa3.98□□□□□ -1.77
CHD9-209ENST00000564255 CTC1Q2NKJ3 1217 aa3.98□□□□□ -1.77
CHD9-209ENST00000564255 DPH6Q7L8W6 267 aa3.98□□□□□ -1.77
CHD9-209ENST00000564255 PGBD3Q8N328 593 aa3.98□□□□□ -1.77
CHD9-209ENST00000564255 SPATA32Q96LK8 384 aa3.98□□□□□ -1.77
CHD9-209ENST00000564255 PUS7Q96PZ0 661 aaKnown RBP3.98□□□□□ -1.77
CHD9-209ENST00000564255 PPP1R1BQ9UD71 204 aaPredicted RBP3.98□□□□□ -1.77
CHD9-209ENST00000564255 GGT7Q9UJ14 662 aa3.98□□□□□ -1.77
CHD9-209ENST00000564255 INPP5FQ9Y2H2 1132 aa3.98□□□□□ -1.77
CHD9-209ENST00000564255 PCDHGB7Q9Y5F8 929 aa3.98□□□□□ -1.77
CHD9-209ENST00000564255 SENP3-EIF4A1A0A087X0R7 540 aa3.97□□□□□ -1.77
CHD9-209ENST00000564255 FIGNL2A6NMB9 653 aa3.97□□□□□ -1.77
CHD9-209ENST00000564255 KIF4AO95239 1232 aa3.97□□□□□ -1.77
CHD9-209ENST00000564255 CYP2E1P05181 493 aaPredicted RBP3.97□□□□□ -1.77
CHD9-209ENST00000564255 ARID5AQ03989 594 aa3.97□□□□□ -1.77
CHD9-209ENST00000564255 PEAR1Q5VY43 1037 aaPredicted RBP3.97□□□□□ -1.77
CHD9-209ENST00000564255 RASGRP4Q8TDF6 673 aa3.97□□□□□ -1.77
CHD9-209ENST00000564255 DHX38Q92620 1227 aaKnown RBP3.97□□□□□ -1.77
CHD9-209ENST00000564255 DNMT3LQ9UJW3 386 aa3.97□□□□□ -1.77
CHD9-209ENST00000564255 FGRP09769 529 aa3.97□□□□□ -1.77
CHD9-209ENST00000564255 CES1P23141 567 aa3.97□□□□□ -1.77
CHD9-209ENST00000564255 CANXP27824 592 aaKnown RBP3.97□□□□□ -1.77
CHD9-209ENST00000564255 SFSWAPQ12872 951 aaKnown RBP3.97□□□□□ -1.77
CHD9-209ENST00000564255 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.97□□□□□ -1.774e-6■■■□□ 19.1
CHD9-209ENST00000564255 MCF2L2Q86YR7 1114 aa3.97□□□□□ -1.77
CHD9-209ENST00000564255 CRIPAKQ8N1N5 446 aa3.97□□□□□ -1.77
CHD9-209ENST00000564255 EHD4Q9H223 541 aa3.97□□□□□ -1.77
CHD9-209ENST00000564255 EFCC1Q9HA90 598 aa3.97□□□□□ -1.77
CHD9-209ENST00000564255 COPRSQ9NQ92 184 aa3.97□□□□□ -1.77
CHD9-209ENST00000564255 NDFIP2Q9NV92 336 aa3.97□□□□□ -1.77
CHD9-209ENST00000564255 ATXN7O15265 892 aaPredicted RBP3.96□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms