RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 KIAA2012Q0VF49 1180 aa17.07■□□□□ 0.32
RABGGTA-213ENST00000560127 USP48Q86UV5 1035 aa17.07■□□□□ 0.32
RABGGTA-213ENST00000560127 NLRP3Q96P20 1036 aa17.07■□□□□ 0.32
RABGGTA-213ENST00000560127 TMX4Q9H1E5 349 aaPredicted RBP17.07■□□□□ 0.32
RABGGTA-213ENST00000560127 CNOT7Q9UIV1 285 aaKnown RBP17.07■□□□□ 0.32
RABGGTA-213ENST00000560127 YDJCA8MPS7 323 aa17.06■□□□□ 0.32
RABGGTA-213ENST00000560127 U2AF1L5P0DN76 240 aaPredicted RBP17.06■□□□□ 0.32
RABGGTA-213ENST00000560127 MYL6BP14649 208 aa17.06■□□□□ 0.32
RABGGTA-213ENST00000560127 U2AF1Q01081 240 aaKnown RBP eCLIP17.06■□□□□ 0.32
RABGGTA-213ENST00000560127 TNIP1Q15025 636 aa17.06■□□□□ 0.32
RABGGTA-213ENST00000560127 GIGYF2Q6Y7W6 1299 aaKnown RBP17.06■□□□□ 0.32
RABGGTA-213ENST00000560127 SAGE1Q9NXZ1 904 aa17.06■□□□□ 0.32
RABGGTA-213ENST00000560127 SLC10A5Q5PT55 438 aa17.05■□□□□ 0.32
RABGGTA-213ENST00000560127 RGMBQ6NW40 437 aa17.05■□□□□ 0.32
RABGGTA-213ENST00000560127 DPP8Q6V1X1 898 aaPredicted RBP17.05■□□□□ 0.32
RABGGTA-213ENST00000560127 PPP1R42Q7Z4L9 355 aa17.05■□□□□ 0.32
RABGGTA-213ENST00000560127 CFAP53Q96M91 514 aa17.05■□□□□ 0.32
RABGGTA-213ENST00000560127 NUDCQ9Y266 331 aa17.05■□□□□ 0.32
RABGGTA-213ENST00000560127 DUOX1Q9NRD9 1551 aa17.05■□□□□ 0.32
RABGGTA-213ENST00000560127 PRPF38BQ5VTL8 546 aaKnown RBP17.04■□□□□ 0.32
RABGGTA-213ENST00000560127 SP8Q8IXZ3 490 aa17.04■□□□□ 0.32
RABGGTA-213ENST00000560127 MICALL2Q8IY33 904 aa17.04■□□□□ 0.32
RABGGTA-213ENST00000560127 MPNDQ8N594 471 aa17.04■□□□□ 0.32
RABGGTA-213ENST00000560127 RNF186Q9NXI6 227 aa17.04■□□□□ 0.32
RABGGTA-213ENST00000560127 LRRC37AA6NMS7 1700 aa17.04■□□□□ 0.32
RABGGTA-213ENST00000560127 H7C1D1 291 aa17.03■□□□□ 0.32
RABGGTA-213ENST00000560127 BBOX1O75936 387 aa17.03■□□□□ 0.32
RABGGTA-213ENST00000560127 EIF4A1P60842 406 aaKnown RBP17.03■□□□□ 0.32
RABGGTA-213ENST00000560127 KIF23Q02241 960 aaPredicted RBP17.03■□□□□ 0.32
RABGGTA-213ENST00000560127 PARP10Q53GL7 1025 aa17.03■□□□□ 0.32
RABGGTA-213ENST00000560127 SCN9AQ15858 1988 aa17.02■□□□□ 0.32
RABGGTA-213ENST00000560127 TRPA1O75762 1119 aa17.02■□□□□ 0.32
RABGGTA-213ENST00000560127 SAMD7Q7Z3H4 446 aa17.02■□□□□ 0.32
RABGGTA-213ENST00000560127 UTP14AQ9BVJ6 771 aaKnown RBP17.02■□□□□ 0.32
RABGGTA-213ENST00000560127 GBA2Q9HCG7 927 aaPredicted RBP17.02■□□□□ 0.32
RABGGTA-213ENST00000560127 ZBTB12Q9Y330 459 aaPredicted RBP17.02■□□□□ 0.32
RABGGTA-213ENST00000560127 MKI67P46013 3256 aaKnown RBP17.02■□□□□ 0.31
RABGGTA-213ENST00000560127 EGFRP00533 1210 aa17.01■□□□□ 0.31
RABGGTA-213ENST00000560127 KRT26Q7Z3Y9 468 aa17.01■□□□□ 0.31
RABGGTA-213ENST00000560127 PNISRQ8TF01 805 aaKnown RBP17.01■□□□□ 0.31
RABGGTA-213ENST00000560127 CCDC102AQ96A19 550 aa17.01■□□□□ 0.31
RABGGTA-213ENST00000560127 ZNF157P51786 506 aaPredicted RBP17■□□□□ 0.31
RABGGTA-213ENST00000560127 LRP10Q7Z4F1 713 aa17■□□□□ 0.31
RABGGTA-213ENST00000560127 C2orf69Q8N8R5 385 aa17■□□□□ 0.31
RABGGTA-213ENST00000560127 DPF2Q92785 391 aa17■□□□□ 0.31
RABGGTA-213ENST00000560127 DDX60Q8IY21 1712 aaKnown RBP16.99■□□□□ 0.31
RABGGTA-213ENST00000560127 ADM5C9JUS6 153 aa16.99■□□□□ 0.31
RABGGTA-213ENST00000560127 TBC1D10BQ4KMP7 808 aaPredicted RBP16.99■□□□□ 0.31
RABGGTA-213ENST00000560127 CTU1Q7Z7A3 348 aaKnown RBP16.99■□□□□ 0.31
RABGGTA-213ENST00000560127 CSRNP1Q96S65 589 aa16.99■□□□□ 0.31
RABGGTA-213ENST00000560127 THUMPD2Q9BTF0 503 aaKnown RBP16.99■□□□□ 0.31
RABGGTA-213ENST00000560127 ERBB4Q15303 1308 aa16.98■□□□□ 0.31
RABGGTA-213ENST00000560127 PSMD14O00487 310 aa16.98■□□□□ 0.31
RABGGTA-213ENST00000560127 SLC10A3P09131 477 aa16.98■□□□□ 0.31
RABGGTA-213ENST00000560127 HCLS1P14317 486 aaPredicted RBP16.98■□□□□ 0.31
RABGGTA-213ENST00000560127 GRAPQ13588 217 aa16.97■□□□□ 0.31
RABGGTA-213ENST00000560127 PDIA6Q15084 440 aa16.97■□□□□ 0.31
RABGGTA-213ENST00000560127 DDX46Q7L014 1031 aaKnown RBP16.97■□□□□ 0.31
RABGGTA-213ENST00000560127 GRAPLQ8TC17 118 aaPredicted RBP16.97■□□□□ 0.31
RABGGTA-213ENST00000560127 KIAA0100Q14667 2235 aaKnown RBP16.97■□□□□ 0.31
RABGGTA-213ENST00000560127 PPP2R1AP30153 589 aa16.96■□□□□ 0.31
RABGGTA-213ENST00000560127 DCPSQ96C86 337 aaKnown RBP16.96■□□□□ 0.31
RABGGTA-213ENST00000560127 DBNDD1Q9H9R9 158 aa16.96■□□□□ 0.31
RABGGTA-213ENST00000560127 HPS5Q9UPZ3 1129 aa16.96■□□□□ 0.31
RABGGTA-213ENST00000560127 CENPFP49454 3210 aa16.96■□□□□ 0.31
RABGGTA-213ENST00000560127 PSME4Q14997 1843 aa16.96■□□□□ 0.3
RABGGTA-213ENST00000560127 HTTP42858 3142 aa16.95■□□□□ 0.3
RABGGTA-213ENST00000560127 PROSER3Q2NL68 480 aa16.95■□□□□ 0.3
RABGGTA-213ENST00000560127 RBM26Q5T8P6 1007 aaKnown RBP16.95■□□□□ 0.3
RABGGTA-213ENST00000560127 NLRP10Q86W26 655 aa16.95■□□□□ 0.3
RABGGTA-213ENST00000560127 COL4A1P02462 1669 aa16.94■□□□□ 0.3
RABGGTA-213ENST00000560127 RTL9Q8NET4 1388 aa16.94■□□□□ 0.3
RABGGTA-213ENST00000560127 ANXA1P04083 346 aa16.94■□□□□ 0.3
RABGGTA-213ENST00000560127 WASHC4Q2M389 1173 aa16.94■□□□□ 0.3
RABGGTA-213ENST00000560127 CCER1Q8TC90 406 aaPredicted RBP16.94■□□□□ 0.3
RABGGTA-213ENST00000560127 KCNQ5Q9NR82 932 aa16.94■□□□□ 0.3
RABGGTA-213ENST00000560127 RPS12P25398 132 aaKnown RBP16.93■□□□□ 0.3
RABGGTA-213ENST00000560127 TMC4Q7Z404 712 aa16.93■□□□□ 0.3
RABGGTA-213ENST00000560127 CEP290O15078 2479 aa16.93■□□□□ 0.3
RABGGTA-213ENST00000560127 ASTN2O75129 1339 aaPredicted RBP16.93■□□□□ 0.3
RABGGTA-213ENST00000560127 PAPPA2Q9BXP8 1791 aa16.92■□□□□ 0.3
RABGGTA-213ENST00000560127 RIMBP2O15034 1052 aa16.92■□□□□ 0.3
RABGGTA-213ENST00000560127 EIF2S2P20042 333 aaKnown RBP16.92■□□□□ 0.3
RABGGTA-213ENST00000560127 KIF4BQ2VIQ3 1234 aa16.92■□□□□ 0.3
RABGGTA-213ENST00000560127 RASAL3Q86YV0 1011 aa16.92■□□□□ 0.3
RABGGTA-213ENST00000560127 REM2Q8IYK8 340 aaPredicted RBP16.92■□□□□ 0.3
RABGGTA-213ENST00000560127 CDCA5Q96FF9 252 aa16.92■□□□□ 0.3
RABGGTA-213ENST00000560127 GGA3Q9NZ52 723 aa16.92■□□□□ 0.3
RABGGTA-213ENST00000560127 POLLQ9UGP5 575 aa16.92■□□□□ 0.3
RABGGTA-213ENST00000560127 TRMT112Q9UI30 125 aaKnown RBP16.92■□□□□ 0.3
RABGGTA-213ENST00000560127 SH3TC1Q8TE82 1336 aa16.92■□□□□ 0.3
RABGGTA-213ENST00000560127 ECE2O60344 883 aa16.91■□□□□ 0.3
RABGGTA-213ENST00000560127 HSP90AB3PQ58FF7 597 aa16.91■□□□□ 0.3
RABGGTA-213ENST00000560127 SULF1Q8IWU6 871 aa16.91■□□□□ 0.3
RABGGTA-213ENST00000560127 NSFL1CQ9UNZ2 370 aaKnown RBP16.91■□□□□ 0.3
RABGGTA-213ENST00000560127 TCIRG1Q13488 830 aa16.9■□□□□ 0.3
RABGGTA-213ENST00000560127 NFE2L2Q16236 605 aa16.9■□□□□ 0.3
RABGGTA-213ENST00000560127 PKN2Q16513 984 aaKnown RBP16.9■□□□□ 0.3
RABGGTA-213ENST00000560127 DOK7Q18PE1 504 aa16.9■□□□□ 0.3
RABGGTA-213ENST00000560127 COPS6Q7L5N1 327 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms