RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 PARP3Q9Y6F1 533 aa7.9□□□□□ -1.14
CTDSPL2-204ENST00000558966 BRCA1P38398 1863 aaKnown RBP7.9□□□□□ -1.15
CTDSPL2-204ENST00000558966 NBPF26B4DH59 902 aa7.89□□□□□ -1.15
CTDSPL2-204ENST00000558966 ANP32CO43423 234 aa7.89□□□□□ -1.15
CTDSPL2-204ENST00000558966 GIGYF1O75420 1035 aaPredicted RBP7.89□□□□□ -1.15
CTDSPL2-204ENST00000558966 NFIXQ14938 502 aa7.89□□□□□ -1.15
CTDSPL2-204ENST00000558966 GPR162Q16538 588 aa7.89□□□□□ -1.15
CTDSPL2-204ENST00000558966 NBPF10Q6P3W6 841 aaKnown RBP7.89□□□□□ -1.15
CTDSPL2-204ENST00000558966 NBPF15Q8N660 670 aa7.89□□□□□ -1.15
CTDSPL2-204ENST00000558966 PXYLP1Q8TE99 480 aa7.89□□□□□ -1.15
CTDSPL2-204ENST00000558966 ZSWIM6Q9HCJ5 1215 aa7.89□□□□□ -1.15
CTDSPL2-204ENST00000558966 TSPYL4Q9UJ04 414 aa7.89□□□□□ -1.15
CTDSPL2-204ENST00000558966 A0A087WZG4 1122 aa7.89□□□□□ -1.15
CTDSPL2-204ENST00000558966 CAMTA2O94983 1202 aa7.89□□□□□ -1.15
CTDSPL2-204ENST00000558966 OATP04181 439 aa7.89□□□□□ -1.15
CTDSPL2-204ENST00000558966 TBC1D2BQ9UPU7 963 aa7.89□□□□□ -1.15
CTDSPL2-204ENST00000558966 APAF1O14727 1248 aa7.88□□□□□ -1.15
CTDSPL2-204ENST00000558966 PRSS12P56730 875 aa7.88□□□□□ -1.15
CTDSPL2-204ENST00000558966 TTC13Q8NBP0 860 aa7.88□□□□□ -1.15
CTDSPL2-204ENST00000558966 CDCA7LQ96GN5 454 aa7.88□□□□□ -1.15
CTDSPL2-204ENST00000558966 BABAM1Q9NWV8 329 aa7.88□□□□□ -1.15
CTDSPL2-204ENST00000558966 WWC3Q9ULE0 1092 aa7.88□□□□□ -1.15
CTDSPL2-204ENST00000558966 CHL1O00533 1208 aa7.87□□□□□ -1.15
CTDSPL2-204ENST00000558966 COL9A1P20849 921 aa7.87□□□□□ -1.15
CTDSPL2-204ENST00000558966 YY1P25490 414 aa7.87□□□□□ -1.15
CTDSPL2-204ENST00000558966 TGFB2P61812 414 aa7.87□□□□□ -1.15
CTDSPL2-204ENST00000558966 TBC1D9BQ66K14 1250 aa7.87□□□□□ -1.15
CTDSPL2-204ENST00000558966 DZIP3Q86Y13 1208 aaKnown RBP7.87□□□□□ -1.15
CTDSPL2-204ENST00000558966 BEGAINQ9BUH8 593 aa7.87□□□□□ -1.15
CTDSPL2-204ENST00000558966 MRS2Q9HD23 443 aa7.87□□□□□ -1.15
CTDSPL2-204ENST00000558966 ANKRD31Q8N7Z5 1873 aa7.87□□□□□ -1.15
CTDSPL2-204ENST00000558966 CARMIL3Q8ND23 1372 aa7.87□□□□□ -1.15
CTDSPL2-204ENST00000558966 A0A0G2JLW4 131 aa7.87□□□□□ -1.15
CTDSPL2-204ENST00000558966 DPEP1P16444 411 aa7.87□□□□□ -1.15
CTDSPL2-204ENST00000558966 BICDL1Q6ZP65 573 aa7.87□□□□□ -1.15
CTDSPL2-204ENST00000558966 GOPCQ9HD26 462 aa7.87□□□□□ -1.15
CTDSPL2-204ENST00000558966 FAM217BQ9NTX9 383 aaPredicted RBP7.87□□□□□ -1.15
CTDSPL2-204ENST00000558966 FAM198AQ9UFP1 575 aa7.87□□□□□ -1.15
CTDSPL2-204ENST00000558966 SERPINB2P05120 415 aa7.86□□□□□ -1.15
CTDSPL2-204ENST00000558966 KCNA3P22001 575 aa7.86□□□□□ -1.15
CTDSPL2-204ENST00000558966 KRT24Q2M2I5 525 aa7.86□□□□□ -1.15
CTDSPL2-204ENST00000558966 MAMSTRQ6ZN01 415 aa7.86□□□□□ -1.15
CTDSPL2-204ENST00000558966 NPM2Q86SE8 214 aaKnown RBP7.86□□□□□ -1.15
CTDSPL2-204ENST00000558966 PCMTD1Q96MG8 357 aaPredicted RBP7.86□□□□□ -1.15
CTDSPL2-204ENST00000558966 RBM27Q9P2N5 1060 aaKnown RBP7.86□□□□□ -1.15
CTDSPL2-204ENST00000558966 DLEC1Q9Y238 1755 aa7.86□□□□□ -1.15
CTDSPL2-204ENST00000558966 ARFGEF1Q9Y6D6 1849 aa7.86□□□□□ -1.15
CTDSPL2-204ENST00000558966 GRIN3BO60391 1043 aa7.85□□□□□ -1.15
CTDSPL2-204ENST00000558966 PPP4R3BQ5MIZ7 849 aa7.85□□□□□ -1.15
CTDSPL2-204ENST00000558966 LRP10Q7Z4F1 713 aa7.85□□□□□ -1.15
CTDSPL2-204ENST00000558966 ZMYND15Q9H091 742 aa7.85□□□□□ -1.15
CTDSPL2-204ENST00000558966 LAS1LQ9Y4W2 734 aaKnown RBP7.85□□□□□ -1.15
CTDSPL2-204ENST00000558966 NUP98P52948 1817 aa7.85□□□□□ -1.15
CTDSPL2-204ENST00000558966 ERBB4Q15303 1308 aa7.85□□□□□ -1.15
CTDSPL2-204ENST00000558966 COL11A2P13942 1736 aaPredicted RBP7.85□□□□□ -1.15
CTDSPL2-204ENST00000558966 SENP3-EIF4A1A0A087X0R7 540 aa7.85□□□□□ -1.15
CTDSPL2-204ENST00000558966 ZNF853P0CG23 659 aa7.85□□□□□ -1.15
CTDSPL2-204ENST00000558966 MYL6BP14649 208 aa7.85□□□□□ -1.15
CTDSPL2-204ENST00000558966 CHRNA5P30532 468 aa7.85□□□□□ -1.15
CTDSPL2-204ENST00000558966 HLFQ16534 295 aa7.85□□□□□ -1.15
CTDSPL2-204ENST00000558966 SH3D19Q5HYK7 790 aa7.85□□□□□ -1.15
CTDSPL2-204ENST00000558966 CLEC4GQ6UXB4 293 aa7.85□□□□□ -1.15
CTDSPL2-204ENST00000558966 MBIPQ9NS73 344 aa7.85□□□□□ -1.15
CTDSPL2-204ENST00000558966 ANXA1P04083 346 aa7.84□□□□□ -1.15
CTDSPL2-204ENST00000558966 EIF2S2P20042 333 aaKnown RBP7.84□□□□□ -1.15
CTDSPL2-204ENST00000558966 PROSER3Q2NL68 480 aa7.84□□□□□ -1.15
CTDSPL2-204ENST00000558966 PRR5LQ6MZQ0 368 aa7.84□□□□□ -1.15
CTDSPL2-204ENST00000558966 TTLL7Q6ZT98 887 aa7.84□□□□□ -1.15
CTDSPL2-204ENST00000558966 CCDC24Q8N4L8 307 aa7.84□□□□□ -1.15
CTDSPL2-204ENST00000558966 NGEFQ8N5V2 710 aa7.84□□□□□ -1.15
CTDSPL2-204ENST00000558966 RBM46Q8TBY0 533 aaKnown RBP7.83□□□□□ -1.16
CTDSPL2-204ENST00000558966 NECTIN2Q92692 538 aa7.83□□□□□ -1.16
CTDSPL2-204ENST00000558966 SETDB2Q96T68 719 aa7.83□□□□□ -1.16
CTDSPL2-204ENST00000558966 IFT57Q9NWB7 429 aa7.83□□□□□ -1.16
CTDSPL2-204ENST00000558966 BCS1LQ9Y276 419 aa7.83□□□□□ -1.16
CTDSPL2-204ENST00000558966 ZNF652Q9Y2D9 606 aa7.83□□□□□ -1.16
CTDSPL2-204ENST00000558966 MAP3K15Q6ZN16 1313 aa7.83□□□□□ -1.16
CTDSPL2-204ENST00000558966 ATP10DQ9P241 1426 aa7.83□□□□□ -1.16
CTDSPL2-204ENST00000558966 ERVV-1B6SEH8 477 aa7.83□□□□□ -1.16
CTDSPL2-204ENST00000558966 C3orf80F5H4A9 247 aa7.83□□□□□ -1.16
CTDSPL2-204ENST00000558966 CNBD1Q8NA66 436 aa7.83□□□□□ -1.16
CTDSPL2-204ENST00000558966 POLR3EQ9NVU0 708 aa7.83□□□□□ -1.16
CTDSPL2-204ENST00000558966 PIM2Q9P1W9 311 aa7.83□□□□□ -1.16
CTDSPL2-204ENST00000558966 TSKSQ9UJT2 592 aa7.83□□□□□ -1.16
CTDSPL2-204ENST00000558966 NIP7Q9Y221 180 aaKnown RBP eCLIP7.83□□□□□ -1.16
CTDSPL2-204ENST00000558966 HOXB7P09629 217 aa7.82□□□□□ -1.16
CTDSPL2-204ENST00000558966 GNAI1P63096 354 aa7.82□□□□□ -1.16
CTDSPL2-204ENST00000558966 CALD1Q05682 793 aaKnown RBP7.82□□□□□ -1.16
CTDSPL2-204ENST00000558966 CCDC27Q2M243 656 aa7.82□□□□□ -1.16
CTDSPL2-204ENST00000558966 ZNF784Q8NCA9 323 aaPredicted RBP7.82□□□□□ -1.16
CTDSPL2-204ENST00000558966 PROCA1Q8NCQ7 364 aaPredicted RBP7.82□□□□□ -1.16
CTDSPL2-204ENST00000558966 BRIP1Q9BX63 1249 aa7.82□□□□□ -1.16
CTDSPL2-204ENST00000558966 ZBTB3Q9H5J0 574 aa7.82□□□□□ -1.16
CTDSPL2-204ENST00000558966 ADCY9O60503 1353 aa7.82□□□□□ -1.16
CTDSPL2-204ENST00000558966 TNRC6CQ9HCJ0 1690 aaKnown RBP7.82□□□□□ -1.16
CTDSPL2-204ENST00000558966 ANKRD36CQ5JPF3 1778 aa7.82□□□□□ -1.16
CTDSPL2-204ENST00000558966 RCCD1A6NED2 376 aa7.81□□□□□ -1.16
CTDSPL2-204ENST00000558966 PTPREP23469 700 aa7.81□□□□□ -1.16
CTDSPL2-204ENST00000558966 SKIV2LQ15477 1246 aaKnown RBP7.81□□□□□ -1.16
CTDSPL2-204ENST00000558966 DALRD3Q5D0E6 543 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms