RNA–Protein interactions for RNA: ENST00000558212.5

TRPM1-206, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-206ENST00000558212 TSGA10IPQ3SY00 556 aa9.58□□□□□ -0.88
TRPM1-206ENST00000558212 DEPDC4Q8N2C3 294 aa9.58□□□□□ -0.88
TRPM1-206ENST00000558212 NGDNQ8NEJ9 315 aaKnown RBP9.58□□□□□ -0.88
TRPM1-206ENST00000558212 PEAK1Q9H792 1746 aa9.58□□□□□ -0.88
TRPM1-206ENST00000558212 PRR36Q9H6K5 1346 aa9.57□□□□□ -0.88
TRPM1-206ENST00000558212 ATP5J2-PTCD1G3V325 749 aa9.57□□□□□ -0.88
TRPM1-206ENST00000558212 CSB-PGBD3P0DP91 1061 aa9.57□□□□□ -0.88
TRPM1-206ENST00000558212 VARSP26640 1264 aaKnown RBP9.57□□□□□ -0.88
TRPM1-206ENST00000558212 EVA1CP58658 441 aa9.57□□□□□ -0.88
TRPM1-206ENST00000558212 MMRN1Q13201 1228 aa9.57□□□□□ -0.88
TRPM1-206ENST00000558212 AGERQ15109 404 aa9.57□□□□□ -0.88
TRPM1-206ENST00000558212 SYT17Q9BSW7 474 aa9.57□□□□□ -0.88
TRPM1-206ENST00000558212 MKRN1Q9UHC7 482 aaKnown RBP9.57□□□□□ -0.88
TRPM1-206ENST00000558212 SBF2Q86WG5 1849 aa9.56□□□□□ -0.88
TRPM1-206ENST00000558212 LMO7Q8WWI1 1683 aa9.56□□□□□ -0.88
TRPM1-206ENST00000558212 ZBTB7AO95365 584 aa9.56□□□□□ -0.88
TRPM1-206ENST00000558212 ZC3H6P61129 1189 aaKnown RBP9.56□□□□□ -0.88
TRPM1-206ENST00000558212 PTK7Q13308 1070 aa9.56□□□□□ -0.88
TRPM1-206ENST00000558212 CDCA8Q53HL2 280 aa9.56□□□□□ -0.88
TRPM1-206ENST00000558212 LARP1Q6PKG0 1096 aaKnown RBP9.56□□□□□ -0.88
TRPM1-206ENST00000558212 FHDC1Q9C0D6 1143 aaPredicted RBP9.56□□□□□ -0.88
TRPM1-206ENST00000558212 ITSN1Q15811 1721 aa9.56□□□□□ -0.88
TRPM1-206ENST00000558212 CPDO75976 1380 aa9.55□□□□□ -0.88
TRPM1-206ENST00000558212 MAP3K5Q99683 1374 aa9.55□□□□□ -0.88
TRPM1-206ENST00000558212 USP17L15C9J2P7 530 aa9.55□□□□□ -0.88
TRPM1-206ENST00000558212 USP17L10C9JJH3 530 aa9.55□□□□□ -0.88
TRPM1-206ENST00000558212 USP17L13C9JLJ4 530 aa9.55□□□□□ -0.88
TRPM1-206ENST00000558212 USP17L12C9JPN9 530 aa9.55□□□□□ -0.88
TRPM1-206ENST00000558212 USP17L11C9JVI0 530 aa9.55□□□□□ -0.88
TRPM1-206ENST00000558212 USP17L21D6R901 530 aa9.55□□□□□ -0.88
TRPM1-206ENST00000558212 USP17L18D6R9N7 530 aa9.55□□□□□ -0.88
TRPM1-206ENST00000558212 USP17L22D6RA61 530 aa9.55□□□□□ -0.88
TRPM1-206ENST00000558212 USP17L17D6RBQ6 530 aa9.55□□□□□ -0.88
TRPM1-206ENST00000558212 USP17L19D6RCP7 530 aa9.55□□□□□ -0.88
TRPM1-206ENST00000558212 USP17L20D6RJB6 530 aa9.55□□□□□ -0.88
TRPM1-206ENST00000558212 USP17L24Q0WX57 530 aa9.55□□□□□ -0.88
TRPM1-206ENST00000558212 EML3Q32P44 896 aa9.55□□□□□ -0.88
TRPM1-206ENST00000558212 CRTC2Q53ET0 693 aaPredicted RBP9.55□□□□□ -0.88
TRPM1-206ENST00000558212 RNF20Q5VTR2 975 aa9.55□□□□□ -0.88
TRPM1-206ENST00000558212 MPNDQ8N594 471 aa9.55□□□□□ -0.88
TRPM1-206ENST00000558212 HIRIP3Q9BW71 556 aaPredicted RBP9.55□□□□□ -0.88
TRPM1-206ENST00000558212 WASLO00401 505 aaPredicted RBP9.54□□□□□ -0.88
TRPM1-206ENST00000558212 DKK1O94907 266 aa9.54□□□□□ -0.88
TRPM1-206ENST00000558212 CDK15Q96Q40 435 aa9.54□□□□□ -0.88
TRPM1-206ENST00000558212 PDGFDQ9GZP0 370 aaPredicted RBP9.54□□□□□ -0.88
TRPM1-206ENST00000558212 DOLKQ9UPQ8 538 aa9.54□□□□□ -0.88
TRPM1-206ENST00000558212 ADGRB1O14514 1584 aa9.54□□□□□ -0.88
TRPM1-206ENST00000558212 LRRC37A3O60309 1634 aa9.53□□□□□ -0.88
TRPM1-206ENST00000558212 BRD1O95696 1058 aa9.53□□□□□ -0.88
TRPM1-206ENST00000558212 CLDN10P78369 228 aa9.53□□□□□ -0.88
TRPM1-206ENST00000558212 LIAT1Q6ZQX7 453 aa9.53□□□□□ -0.88
TRPM1-206ENST00000558212 STK32AQ8WU08 396 aa9.53□□□□□ -0.88
TRPM1-206ENST00000558212 MTFR1LQ9H019 292 aa9.53□□□□□ -0.88
TRPM1-206ENST00000558212 STK32BQ9NY57 414 aa9.53□□□□□ -0.88
TRPM1-206ENST00000558212 NOVA2Q9UNW9 492 aaKnown RBP9.53□□□□□ -0.88
TRPM1-206ENST00000558212 BCL9O00512 1426 aa9.53□□□□□ -0.88
TRPM1-206ENST00000558212 CRB1P82279 1406 aa9.53□□□□□ -0.88
TRPM1-206ENST00000558212 COL5A2P05997 1499 aaPredicted RBP9.53□□□□□ -0.88
TRPM1-206ENST00000558212 TMEM164Q5U3C3 297 aa9.52□□□□□ -0.89
TRPM1-206ENST00000558212 KCTD15Q96SI1 283 aaPredicted RBP9.52□□□□□ -0.89
TRPM1-206ENST00000558212 USP19O94966 1318 aa9.52□□□□□ -0.89
TRPM1-206ENST00000558212 POLR3AO14802 1390 aaPredicted RBP9.51□□□□□ -0.89
TRPM1-206ENST00000558212 AATKQ6ZMQ8 1374 aa9.51□□□□□ -0.89
TRPM1-206ENST00000558212 CARNS1A5YM72 827 aa9.51□□□□□ -0.89
TRPM1-206ENST00000558212 SLC15A2Q16348 729 aa9.51□□□□□ -0.89
TRPM1-206ENST00000558212 NUTM2GQ5VZR2 741 aa9.51□□□□□ -0.89
TRPM1-206ENST00000558212 SIX5Q8N196 739 aa9.51□□□□□ -0.89
TRPM1-206ENST00000558212 CDCA7Q9BWT1 371 aaPredicted RBP9.51□□□□□ -0.89
TRPM1-206ENST00000558212 GOLGB1Q14789 3259 aaKnown RBP9.51□□□□□ -0.89
TRPM1-206ENST00000558212 SIAH2O43255 324 aa9.5□□□□□ -0.89
TRPM1-206ENST00000558212 CD2BP2O95400 341 aaKnown RBP9.5□□□□□ -0.89
TRPM1-206ENST00000558212 RASA1P20936 1047 aa9.5□□□□□ -0.89
TRPM1-206ENST00000558212 DDB1Q16531 1140 aa9.5□□□□□ -0.89
TRPM1-206ENST00000558212 INTS6LQ5JSJ4 861 aaKnown RBP9.5□□□□□ -0.89
TRPM1-206ENST00000558212 RC3H1Q5TC82 1133 aaKnown RBP9.5□□□□□ -0.89
TRPM1-206ENST00000558212 TRIM50Q86XT4 487 aa9.5□□□□□ -0.89
TRPM1-206ENST00000558212 OGFOD1Q8N543 542 aa9.5□□□□□ -0.89
TRPM1-206ENST00000558212 TRAK1Q9UPV9 953 aa9.5□□□□□ -0.89
TRPM1-206ENST00000558212 NOD1Q9Y239 953 aa9.5□□□□□ -0.89
TRPM1-206ENST00000558212 TOPAZ1Q8N9V7 1692 aa9.49□□□□□ -0.89
TRPM1-206ENST00000558212 ZBTB7BO15156 539 aaPredicted RBP9.49□□□□□ -0.89
TRPM1-206ENST00000558212 GPR162Q16538 588 aa9.49□□□□□ -0.89
TRPM1-206ENST00000558212 TXNRD1Q16881 649 aa9.49□□□□□ -0.89
TRPM1-206ENST00000558212 PTF1AQ7RTS3 328 aa9.49□□□□□ -0.89
TRPM1-206ENST00000558212 LARGE2Q8N3Y3 721 aa9.49□□□□□ -0.89
TRPM1-206ENST00000558212 NUDT16Q96DE0 195 aaKnown RBP9.49□□□□□ -0.89
TRPM1-206ENST00000558212 MPHOSPH9Q99550 1183 aa9.49□□□□□ -0.89
TRPM1-206ENST00000558212 AKAP12Q02952 1782 aa9.49□□□□□ -0.89
TRPM1-206ENST00000558212 WNK3Q9BYP7 1800 aa9.49□□□□□ -0.89
TRPM1-206ENST00000558212 SHANK3Q9BYB0 1731 aa9.48□□□□□ -0.89
TRPM1-206ENST00000558212 ATP1A2P50993 1020 aa9.48□□□□□ -0.89
TRPM1-206ENST00000558212 KCNA1Q09470 495 aa9.48□□□□□ -0.89
TRPM1-206ENST00000558212 ANKMY2Q8IV38 441 aa9.48□□□□□ -0.89
TRPM1-206ENST00000558212 ABTB2Q8N961 1025 aa9.48□□□□□ -0.89
TRPM1-206ENST00000558212 EHBP1Q8NDI1 1231 aa9.48□□□□□ -0.89
TRPM1-206ENST00000558212 KIAA1024Q9UPX6 916 aa9.48□□□□□ -0.89
TRPM1-206ENST00000558212 PCDHGA11Q9Y5H2 935 aa9.48□□□□□ -0.89
TRPM1-206ENST00000558212 WNT7AO00755 349 aa9.47□□□□□ -0.89
TRPM1-206ENST00000558212 GCP02774 474 aa9.47□□□□□ -0.89
TRPM1-206ENST00000558212 GRM5P41594 1212 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms