RNA–Protein interactions for RNA: ENST00000556890.1

AL390334.1-204, humanhuman

TSL 1 (best)

Gene AL390334.1, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390334.1-204ENST00000556890 LINC00528Q8N1L1 170 aa9.43□□□□□ -0.9
AL390334.1-204ENST00000556890 LARP1Q6PKG0 1096 aaKnown RBP9.42□□□□□ -0.9
AL390334.1-204ENST00000556890 FAM196AQ6ZSG2 479 aa9.42□□□□□ -0.9
AL390334.1-204ENST00000556890 TCP11L2Q8N4U5 519 aa9.42□□□□□ -0.9
AL390334.1-204ENST00000556890 TSEN34Q9BSV6 310 aaKnown RBP9.42□□□□□ -0.9
AL390334.1-204ENST00000556890 RGPD3A6NKT7 1758 aaPredicted RBP9.42□□□□□ -0.9
AL390334.1-204ENST00000556890 RGPD4Q7Z3J3 1758 aa9.42□□□□□ -0.9
AL390334.1-204ENST00000556890 CRB1P82279 1406 aa9.41□□□□□ -0.9
AL390334.1-204ENST00000556890 MAGEB6P1A0A0J9YX57 407 aa9.41□□□□□ -0.9
AL390334.1-204ENST00000556890 TRIM37O94972 964 aa9.41□□□□□ -0.9
AL390334.1-204ENST00000556890 CCDC116Q8IYX3 515 aa9.41□□□□□ -0.9
AL390334.1-204ENST00000556890 CARD11Q9BXL7 1154 aa9.41□□□□□ -0.9
AL390334.1-204ENST00000556890 POLR3EQ9NVU0 708 aa9.41□□□□□ -0.9
AL390334.1-204ENST00000556890 DISP2A7MBM2 1401 aa9.4□□□□□ -0.9
AL390334.1-204ENST00000556890 KTN1Q86UP2 1357 aaKnown RBP9.4□□□□□ -0.9
AL390334.1-204ENST00000556890 PEAK1Q9H792 1746 aa9.4□□□□□ -0.9
AL390334.1-204ENST00000556890 PDXDC2PQ6P474 469 aa9.4□□□□□ -0.9
AL390334.1-204ENST00000556890 THRAP3Q9Y2W1 955 aaKnown RBP9.4□□□□□ -0.9
AL390334.1-204ENST00000556890 CPSF1Q10570 1443 aaKnown RBP9.39□□□□□ -0.91
AL390334.1-204ENST00000556890 AATKQ6ZMQ8 1374 aa9.39□□□□□ -0.91
AL390334.1-204ENST00000556890 SBNO2Q9Y2G9 1366 aa9.39□□□□□ -0.91
AL390334.1-204ENST00000556890 FAM208AQ9UK61 1670 aaKnown RBP9.39□□□□□ -0.91
AL390334.1-204ENST00000556890 TTC21BQ7Z4L5 1316 aa9.39□□□□□ -0.91
AL390334.1-204ENST00000556890 TTC21AQ8NDW8 1320 aa9.39□□□□□ -0.91
AL390334.1-204ENST00000556890 ERFEQ4G0M1 354 aa9.39□□□□□ -0.91
AL390334.1-204ENST00000556890 TOM1L2Q6ZVM7 507 aa9.39□□□□□ -0.91
AL390334.1-204ENST00000556890 CDV3Q9UKY7 258 aaKnown RBP9.39□□□□□ -0.91
AL390334.1-204ENST00000556890 KIF20BQ96Q89 1820 aa9.38□□□□□ -0.91
AL390334.1-204ENST00000556890 RGPD2P0DJD1 1756 aa9.38□□□□□ -0.91
AL390334.1-204ENST00000556890 NFAT5O94916 1531 aa9.38□□□□□ -0.91
AL390334.1-204ENST00000556890 ABCC6O95255 1503 aa9.38□□□□□ -0.91
AL390334.1-204ENST00000556890 PPFIA3O75145 1194 aa9.38□□□□□ -0.91
AL390334.1-204ENST00000556890 APBA3O96018 575 aa9.38□□□□□ -0.91
AL390334.1-204ENST00000556890 CTDSPL2Q05D32 466 aa9.38□□□□□ -0.91
AL390334.1-204ENST00000556890 EZH2Q15910 746 aaKnown RBP9.38□□□□□ -0.91
AL390334.1-204ENST00000556890 KCNH5Q8NCM2 988 aa9.38□□□□□ -0.91
AL390334.1-204ENST00000556890 TMC1Q8TDI8 760 aa9.38□□□□□ -0.91
AL390334.1-204ENST00000556890 CARD14Q9BXL6 1004 aa9.38□□□□□ -0.91
AL390334.1-204ENST00000556890 ZC3H4Q9UPT8 1303 aaKnown RBP9.37□□□□□ -0.91
AL390334.1-204ENST00000556890 CSB-PGBD3P0DP91 1061 aa9.37□□□□□ -0.91
AL390334.1-204ENST00000556890 SKIV2LQ15477 1246 aaKnown RBP9.37□□□□□ -0.91
AL390334.1-204ENST00000556890 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.37□□□□□ -0.91
AL390334.1-204ENST00000556890 PGPEP1Q9NXJ5 209 aa9.37□□□□□ -0.91
AL390334.1-204ENST00000556890 FKBPLQ9UIM3 349 aa9.37□□□□□ -0.91
AL390334.1-204ENST00000556890 OVOS2A0A0G2JMS6 1433 aa9.37□□□□□ -0.91
AL390334.1-204ENST00000556890 OVOS2A0A0J9YW53 1432 aa9.37□□□□□ -0.91
AL390334.1-204ENST00000556890 OVOS2Q6IE36 1432 aa9.37□□□□□ -0.91
AL390334.1-204ENST00000556890 PARD3Q8TEW0 1356 aa9.37□□□□□ -0.91
AL390334.1-204ENST00000556890 WDR17Q8IZU2 1322 aa9.36□□□□□ -0.91
AL390334.1-204ENST00000556890 R3HDM1Q15032 1099 aaKnown RBP9.36□□□□□ -0.91
AL390334.1-204ENST00000556890 DDB1Q16531 1140 aa9.36□□□□□ -0.91
AL390334.1-204ENST00000556890 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.36□□□□□ -0.91
AL390334.1-204ENST00000556890 HDGFL2Q7Z4V5 671 aaPredicted RBP9.36□□□□□ -0.91
AL390334.1-204ENST00000556890 ARHGAP9Q9BRR9 750 aa9.36□□□□□ -0.91
AL390334.1-204ENST00000556890 DNMT3LQ9UJW3 386 aa9.36□□□□□ -0.91
AL390334.1-204ENST00000556890 BTAF1O14981 1849 aa9.35□□□□□ -0.91
AL390334.1-204ENST00000556890 NHSQ6T4R5 1651 aa9.35□□□□□ -0.91
AL390334.1-204ENST00000556890 CD163L1Q9NR16 1453 aa9.34□□□□□ -0.91
AL390334.1-204ENST00000556890 EDC4Q6P2E9 1401 aaKnown RBP9.34□□□□□ -0.91
AL390334.1-204ENST00000556890 TTLL8A6PVC2 850 aa9.34□□□□□ -0.91
AL390334.1-204ENST00000556890 DHX9Q08211 1270 aaKnown RBP9.34□□□□□ -0.91
AL390334.1-204ENST00000556890 TRIM26Q12899 539 aaPredicted RBP9.34□□□□□ -0.91
AL390334.1-204ENST00000556890 SH3D19Q5HYK7 790 aa9.34□□□□□ -0.91
AL390334.1-204ENST00000556890 PPP1R26Q5T8A7 1209 aaPredicted RBP9.34□□□□□ -0.91
AL390334.1-204ENST00000556890 PPP2R2DQ66LE6 453 aa9.34□□□□□ -0.91
AL390334.1-204ENST00000556890 Q6ZVU0 165 aa9.34□□□□□ -0.91
AL390334.1-204ENST00000556890 ARHGEF25Q86VW2 580 aa9.34□□□□□ -0.91
AL390334.1-204ENST00000556890 SLC10A4Q96EP9 437 aa9.34□□□□□ -0.91
AL390334.1-204ENST00000556890 CAMKK2Q96RR4 588 aa9.34□□□□□ -0.91
AL390334.1-204ENST00000556890 CDCA7Q9BWT1 371 aaPredicted RBP9.34□□□□□ -0.91
AL390334.1-204ENST00000556890 TERF2IPQ9NYB0 399 aa9.34□□□□□ -0.91
AL390334.1-204ENST00000556890 ZBTB33Q86T24 672 aa9.33□□□□□ -0.92
AL390334.1-204ENST00000556890 NME9Q86XW9 330 aa9.33□□□□□ -0.92
AL390334.1-204ENST00000556890 DDRGK1Q96HY6 314 aa9.33□□□□□ -0.92
AL390334.1-204ENST00000556890 KCTD15Q96SI1 283 aaPredicted RBP9.33□□□□□ -0.92
AL390334.1-204ENST00000556890 GPSM3Q9Y4H4 160 aa9.33□□□□□ -0.92
AL390334.1-204ENST00000556890 A0A1W2PP64 1363 aa9.33□□□□□ -0.92
AL390334.1-204ENST00000556890 CCDC7Q96M83 1385 aa9.33□□□□□ -0.92
AL390334.1-204ENST00000556890 LRRN4Q8WUT4 740 aa9.32□□□□□ -0.92
AL390334.1-204ENST00000556890 CARD10Q9BWT7 1032 aa9.32□□□□□ -0.92
AL390334.1-204ENST00000556890 SLC12A5Q9H2X9 1139 aa9.32□□□□□ -0.92
AL390334.1-204ENST00000556890 USP31Q70CQ4 1352 aa9.32□□□□□ -0.92
AL390334.1-204ENST00000556890 MAP2P11137 1827 aaKnown RBP9.31□□□□□ -0.92
AL390334.1-204ENST00000556890 SPINT1O43278 529 aa9.31□□□□□ -0.92
AL390334.1-204ENST00000556890 SLC24A1O60721 1099 aa9.31□□□□□ -0.92
AL390334.1-204ENST00000556890 PTK2Q05397 1052 aa9.31□□□□□ -0.92
AL390334.1-204ENST00000556890 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.31□□□□□ -0.92
AL390334.1-204ENST00000556890 NINLQ9Y2I6 1382 aa9.31□□□□□ -0.92
AL390334.1-204ENST00000556890 MYOM1P52179 1685 aa9.31□□□□□ -0.92
AL390334.1-204ENST00000556890 CASZ1Q86V15 1759 aa9.31□□□□□ -0.92
AL390334.1-204ENST00000556890 DOT1LQ8TEK3 1739 aa9.31□□□□□ -0.92
AL390334.1-204ENST00000556890 TNS2Q63HR2 1409 aa9.31□□□□□ -0.92
AL390334.1-204ENST00000556890 ST20-MTHFSA0A0A6YYL1 179 aa9.3□□□□□ -0.92
AL390334.1-204ENST00000556890 EXOC5O00471 708 aa9.3□□□□□ -0.92
AL390334.1-204ENST00000556890 PNMA1Q8ND90 353 aa9.3□□□□□ -0.92
AL390334.1-204ENST00000556890 NLRP2Q9NX02 1062 aa9.3□□□□□ -0.92
AL390334.1-204ENST00000556890 SHANK3Q9BYB0 1731 aa9.3□□□□□ -0.92
AL390334.1-204ENST00000556890 PTSQ03393 145 aa9.29□□□□□ -0.92
AL390334.1-204ENST00000556890 CBLBQ13191 982 aa9.29□□□□□ -0.92
AL390334.1-204ENST00000556890 NR6A1Q15406 480 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms