RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 OTUD7AQ8TE49 926 aaPredicted RBP12.11□□□□□ -0.47
EFCAB11-208ENST00000555872 TRIM35Q9UPQ4 493 aa12.11□□□□□ -0.47
EFCAB11-208ENST00000555872 CNPY2Q9Y2B0 182 aa12.11□□□□□ -0.47
EFCAB11-208ENST00000555872 FRMD4BQ9Y2L6 1034 aa12.11□□□□□ -0.47
EFCAB11-208ENST00000555872 SMAPO00193 183 aa12.1□□□□□ -0.47
EFCAB11-208ENST00000555872 PSMD2Q13200 908 aa12.1□□□□□ -0.47
EFCAB11-208ENST00000555872 TPD52L1Q16890 204 aaPredicted RBP12.1□□□□□ -0.47
EFCAB11-208ENST00000555872 GOLGA6L1Q8N7Z2 621 aa12.1□□□□□ -0.47
EFCAB11-208ENST00000555872 PICK1Q9NRD5 415 aa12.1□□□□□ -0.47
EFCAB11-208ENST00000555872 FAM53CQ9NYF3 392 aa12.1□□□□□ -0.47
EFCAB11-208ENST00000555872 ZNF215Q9UL58 517 aaPredicted RBP12.1□□□□□ -0.47
EFCAB11-208ENST00000555872 METP08581 1390 aa12.1□□□□□ -0.47
EFCAB11-208ENST00000555872 LTKP29376 864 aa12.1□□□□□ -0.47
EFCAB11-208ENST00000555872 TMPOP42166 694 aaKnown RBP12.1□□□□□ -0.47
EFCAB11-208ENST00000555872 TXNDC2Q86VQ3 553 aa12.1□□□□□ -0.47
EFCAB11-208ENST00000555872 DRC7Q8IY82 874 aa12.1□□□□□ -0.47
EFCAB11-208ENST00000555872 ANKRD20A12PQ8NF67 263 aa12.1□□□□□ -0.47
EFCAB11-208ENST00000555872 NSD3Q9BZ95 1437 aa12.1□□□□□ -0.47
EFCAB11-208ENST00000555872 NPHP1O15259 732 aa12.1□□□□□ -0.47
EFCAB11-208ENST00000555872 KIF4AO95239 1232 aa12.1□□□□□ -0.47
EFCAB11-208ENST00000555872 POLA2Q14181 598 aa12.1□□□□□ -0.47
EFCAB11-208ENST00000555872 SYT10Q6XYQ8 523 aa12.1□□□□□ -0.47
EFCAB11-208ENST00000555872 TSPYL2Q9H2G4 693 aaPredicted RBP12.1□□□□□ -0.47
EFCAB11-208ENST00000555872 LCMT1Q9UIC8 334 aa12.1□□□□□ -0.47
EFCAB11-208ENST00000555872 ADGRB2O60241 1585 aa12.09□□□□□ -0.47
EFCAB11-208ENST00000555872 CUL4AQ13619 759 aa12.09□□□□□ -0.47
EFCAB11-208ENST00000555872 ELF2Q15723 593 aa12.09□□□□□ -0.47
EFCAB11-208ENST00000555872 ARMC3Q5W041 872 aa12.09□□□□□ -0.47
EFCAB11-208ENST00000555872 FUCA2Q9BTY2 467 aa12.09□□□□□ -0.47
EFCAB11-208ENST00000555872 ATG3Q9NT62 314 aa12.09□□□□□ -0.47
EFCAB11-208ENST00000555872 NRBP1Q9UHY1 535 aa12.09□□□□□ -0.47
EFCAB11-208ENST00000555872 PIK3R4Q99570 1358 aa12.09□□□□□ -0.47
EFCAB11-208ENST00000555872 APBB1O00213 710 aa12.09□□□□□ -0.47
EFCAB11-208ENST00000555872 AMOTQ4VCS5 1084 aa12.09□□□□□ -0.47
EFCAB11-208ENST00000555872 CEP135Q66GS9 1140 aa12.09□□□□□ -0.47
EFCAB11-208ENST00000555872 GTF3C6Q969F1 213 aa12.09□□□□□ -0.47
EFCAB11-208ENST00000555872 TBX22Q9Y458 520 aa12.09□□□□□ -0.47
EFCAB11-208ENST00000555872 PCDHGA4Q9Y5G9 962 aa12.09□□□□□ -0.47
EFCAB11-208ENST00000555872 UBAP1LF5GYI3 381 aa12.08□□□□□ -0.48
EFCAB11-208ENST00000555872 PPFIA2O75334 1257 aa12.08□□□□□ -0.48
EFCAB11-208ENST00000555872 UPF1Q92900 1129 aaKnown RBP eCLIP12.08□□□□□ -0.48
EFCAB11-208ENST00000555872 FMNL2Q96PY5 1086 aa12.08□□□□□ -0.48
EFCAB11-208ENST00000555872 SRCIN1Q9C0H9 1055 aa12.08□□□□□ -0.48
EFCAB11-208ENST00000555872 XRN1Q8IZH2 1706 aaKnown RBP12.08□□□□□ -0.48
EFCAB11-208ENST00000555872 WDR33Q9C0J8 1336 aaKnown RBP12.08□□□□□ -0.48
EFCAB11-208ENST00000555872 TCHHQ07283 1943 aa12.08□□□□□ -0.48
EFCAB11-208ENST00000555872 ERC2O15083 957 aa12.08□□□□□ -0.48
EFCAB11-208ENST00000555872 MARCH6O60337 910 aa12.08□□□□□ -0.48
EFCAB11-208ENST00000555872 MCM2P49736 904 aa12.08□□□□□ -0.48
EFCAB11-208ENST00000555872 UBE2HP62256 183 aa12.08□□□□□ -0.48
EFCAB11-208ENST00000555872 ALDH1L2Q3SY69 923 aa12.08□□□□□ -0.48
EFCAB11-208ENST00000555872 KIF1BPQ96EK5 621 aa12.08□□□□□ -0.48
EFCAB11-208ENST00000555872 PRAM1Q96QH2 718 aa12.08□□□□□ -0.48
EFCAB11-208ENST00000555872 ATAD2Q6PL18 1390 aa12.07□□□□□ -0.48
EFCAB11-208ENST00000555872 A0A1B0GUL7 405 aa12.07□□□□□ -0.48
EFCAB11-208ENST00000555872 RBM47A0AV96 593 aaKnown RBP12.07□□□□□ -0.48
EFCAB11-208ENST00000555872 FIBPO43427 364 aa12.07□□□□□ -0.48
EFCAB11-208ENST00000555872 PPFIA4O75335 1185 aa12.07□□□□□ -0.48
EFCAB11-208ENST00000555872 CCDC15Q0P6D6 951 aa12.07□□□□□ -0.48
EFCAB11-208ENST00000555872 PUS10Q3MIT2 529 aaKnown RBP12.07□□□□□ -0.48
EFCAB11-208ENST00000555872 PHC3Q8NDX5 983 aa12.07□□□□□ -0.48
EFCAB11-208ENST00000555872 INTS4Q96HW7 963 aaKnown RBP12.07□□□□□ -0.48
EFCAB11-208ENST00000555872 FAXDC2Q96IV6 333 aa12.07□□□□□ -0.48
EFCAB11-208ENST00000555872 SLX1AQ9BQ83 275 aa12.07□□□□□ -0.48
EFCAB11-208ENST00000555872 SLC12A5Q9H2X9 1139 aa12.07□□□□□ -0.48
EFCAB11-208ENST00000555872 SUN2Q9UH99 717 aa12.07□□□□□ -0.48
EFCAB11-208ENST00000555872 PPME1Q9Y570 386 aa12.07□□□□□ -0.48
EFCAB11-208ENST00000555872 MYBL2P10244 700 aa12.07□□□□□ -0.48
EFCAB11-208ENST00000555872 IL16Q14005 1332 aa12.07□□□□□ -0.48
EFCAB11-208ENST00000555872 PTCH1Q13635 1447 aa12.07□□□□□ -0.48
EFCAB11-208ENST00000555872 ADCY2Q08462 1091 aa12.06□□□□□ -0.48
EFCAB11-208ENST00000555872 BMS1Q14692 1282 aaKnown RBP12.06□□□□□ -0.48
EFCAB11-208ENST00000555872 ZSCAN25Q6NSZ9 544 aa12.06□□□□□ -0.48
EFCAB11-208ENST00000555872 PACS2Q86VP3 889 aa12.06□□□□□ -0.48
EFCAB11-208ENST00000555872 NEK11Q8NG66 645 aa12.06□□□□□ -0.48
EFCAB11-208ENST00000555872 SLC24A3Q9HC58 644 aa12.06□□□□□ -0.48
EFCAB11-208ENST00000555872 CHCHD3Q9NX63 227 aaKnown RBP12.06□□□□□ -0.48
EFCAB11-208ENST00000555872 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.06□□□□□ -0.48
EFCAB11-208ENST00000555872 PNMA2Q9UL42 364 aa12.06□□□□□ -0.48
EFCAB11-208ENST00000555872 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.06□□□□□ -0.48
EFCAB11-208ENST00000555872 CHD2O14647 1828 aaKnown RBP12.06□□□□□ -0.48
EFCAB11-208ENST00000555872 CCP110O43303 1012 aa12.06□□□□□ -0.48
EFCAB11-208ENST00000555872 TMEM87AQ8NBN3 555 aa12.06□□□□□ -0.48
EFCAB11-208ENST00000555872 HELBQ8NG08 1087 aaPredicted RBP12.06□□□□□ -0.48
EFCAB11-208ENST00000555872 MAGEA8P43361 318 aa12.05□□□□□ -0.48
EFCAB11-208ENST00000555872 LUZP1Q86V48 1076 aa12.05□□□□□ -0.48
EFCAB11-208ENST00000555872 IRX1P78414 480 aaPredicted RBP12.05□□□□□ -0.48
EFCAB11-208ENST00000555872 TBC1D25Q3MII6 688 aa12.05□□□□□ -0.48
EFCAB11-208ENST00000555872 TTC31Q49AM3 519 aaPredicted RBP12.05□□□□□ -0.48
EFCAB11-208ENST00000555872 MCTP2Q6DN12 878 aa12.05□□□□□ -0.48
EFCAB11-208ENST00000555872 NFXL1Q6ZNB6 911 aa12.05□□□□□ -0.48
EFCAB11-208ENST00000555872 UPF3BQ9BZI7 483 aaKnown RBP12.05□□□□□ -0.48
EFCAB11-208ENST00000555872 DCTPP1Q9H773 170 aa12.05□□□□□ -0.48
EFCAB11-208ENST00000555872 CEP126Q9P2H0 1117 aa12.05□□□□□ -0.48
EFCAB11-208ENST00000555872 PALD1Q9ULE6 856 aa12.05□□□□□ -0.48
EFCAB11-208ENST00000555872 SUGT1Q9Y2Z0 365 aa12.05□□□□□ -0.48
EFCAB11-208ENST00000555872 CCDC192P0DO97 292 aa12.04□□□□□ -0.48
EFCAB11-208ENST00000555872 DZIP3Q86Y13 1208 aaKnown RBP12.04□□□□□ -0.48
EFCAB11-208ENST00000555872 CPSF2Q9P2I0 782 aaKnown RBP12.04□□□□□ -0.48
EFCAB11-208ENST00000555872 NWD1Q149M9 1564 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms