RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 ITGA6P23229 1130 aa8.61□□□□□ -1.03
SYNE2-210ENST00000553455 DAB2P98082 770 aa8.61□□□□□ -1.03
SYNE2-210ENST00000553455 TMC4Q7Z404 712 aa8.61□□□□□ -1.03
SYNE2-210ENST00000553455 ZFYVE28Q9HCC9 887 aa8.61□□□□□ -1.03
SYNE2-210ENST00000553455 CNTN3Q9P232 1028 aa8.61□□□□□ -1.03
SYNE2-210ENST00000553455 LAMC2Q13753 1193 aa8.6□□□□□ -1.03
SYNE2-210ENST00000553455 LDLRAD1Q5T700 205 aa8.6□□□□□ -1.03
SYNE2-210ENST00000553455 NLRP13Q86W25 1043 aa8.6□□□□□ -1.03
SYNE2-210ENST00000553455 GSX2Q9BZM3 304 aa8.6□□□□□ -1.03
SYNE2-210ENST00000553455 PHACTR2O75167 634 aa8.59□□□□□ -1.03
SYNE2-210ENST00000553455 XPCQ01831 940 aaPredicted RBP8.59□□□□□ -1.03
SYNE2-210ENST00000553455 C1orf127Q8N9H9 656 aa8.59□□□□□ -1.03
SYNE2-210ENST00000553455 ABHD17AQ96GS6 310 aa8.59□□□□□ -1.03
SYNE2-210ENST00000553455 GMCL1Q96IK5 515 aa8.59□□□□□ -1.03
SYNE2-210ENST00000553455 ABI2Q9NYB9 513 aaPredicted RBP8.59□□□□□ -1.03
SYNE2-210ENST00000553455 SASH3O75995 380 aa8.58□□□□□ -1.04
SYNE2-210ENST00000553455 GNA15P30679 374 aa8.58□□□□□ -1.04
SYNE2-210ENST00000553455 IRS1P35568 1242 aa8.58□□□□□ -1.04
SYNE2-210ENST00000553455 CCINQ13939 588 aa8.58□□□□□ -1.04
SYNE2-210ENST00000553455 PI16Q6UXB8 463 aa8.58□□□□□ -1.04
SYNE2-210ENST00000553455 GTPBP3Q969Y2 492 aaKnown RBP8.58□□□□□ -1.04
SYNE2-210ENST00000553455 CCDC74AQ96AQ1 378 aa8.58□□□□□ -1.04
SYNE2-210ENST00000553455 ZFATQ9P243 1243 aa8.58□□□□□ -1.04
SYNE2-210ENST00000553455 EREGO14944 169 aa8.57□□□□□ -1.04
SYNE2-210ENST00000553455 POLR3DP05423 398 aaPredicted RBP8.57□□□□□ -1.04
SYNE2-210ENST00000553455 TCF3P15923 654 aa8.57□□□□□ -1.04
SYNE2-210ENST00000553455 TARSP26639 723 aaKnown RBP8.57□□□□□ -1.04
SYNE2-210ENST00000553455 VEGFBP49765 207 aa8.57□□□□□ -1.04
SYNE2-210ENST00000553455 PSMD2Q13200 908 aa8.57□□□□□ -1.04
SYNE2-210ENST00000553455 TSNAXIP1Q2TAA8 658 aa8.57□□□□□ -1.04
SYNE2-210ENST00000553455 KRT25Q7Z3Z0 450 aa8.57□□□□□ -1.04
SYNE2-210ENST00000553455 SLC30A3Q99726 388 aa8.57□□□□□ -1.04
SYNE2-210ENST00000553455 BACH2Q9BYV9 841 aa8.57□□□□□ -1.04
SYNE2-210ENST00000553455 MARK1Q9P0L2 795 aa8.57□□□□□ -1.04
SYNE2-210ENST00000553455 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.57□□□□□ -1.04
SYNE2-210ENST00000553455 SORBS3O60504 671 aa8.56□□□□□ -1.04
SYNE2-210ENST00000553455 PPFIA3O75145 1194 aa8.56□□□□□ -1.04
SYNE2-210ENST00000553455 CYP2E1P05181 493 aaPredicted RBP8.56□□□□□ -1.04
SYNE2-210ENST00000553455 CD33P20138 364 aa8.56□□□□□ -1.04
SYNE2-210ENST00000553455 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.56□□□□□ -1.04
SYNE2-210ENST00000553455 EPS8L3Q8TE67 593 aaKnown RBP8.56□□□□□ -1.04
SYNE2-210ENST00000553455 ATXN7L1Q9ULK2 861 aaPredicted RBP8.56□□□□□ -1.04
SYNE2-210ENST00000553455 C11orf95C9JLR9 678 aaPredicted RBP8.55□□□□□ -1.04
SYNE2-210ENST00000553455 MMP20O60882 483 aa8.55□□□□□ -1.04
SYNE2-210ENST00000553455 SPEM2Q0P670 501 aa8.55□□□□□ -1.04
SYNE2-210ENST00000553455 Q6ZNB5 142 aa8.55□□□□□ -1.04
SYNE2-210ENST00000553455 GALNT12Q8IXK2 581 aa8.55□□□□□ -1.04
SYNE2-210ENST00000553455 OR13H1Q8NG92 308 aa8.55□□□□□ -1.04
SYNE2-210ENST00000553455 BCL11AQ9H165 835 aa8.55□□□□□ -1.04
SYNE2-210ENST00000553455 NPHS2Q9NP85 383 aa8.55□□□□□ -1.04
SYNE2-210ENST00000553455 POTECB2RU33 542 aa8.54□□□□□ -1.04
SYNE2-210ENST00000553455 RARAP10276 462 aa8.54□□□□□ -1.04
SYNE2-210ENST00000553455 NFKB1P19838 968 aa8.54□□□□□ -1.04
SYNE2-210ENST00000553455 FGFR3P22607 806 aa8.54□□□□□ -1.04
SYNE2-210ENST00000553455 FAM182BQ5T319 152 aa8.54□□□□□ -1.04
SYNE2-210ENST00000553455 TTC39BQ5VTQ0 682 aaPredicted RBP8.54□□□□□ -1.04
SYNE2-210ENST00000553455 RAB44Q7Z6P3 723 aaPredicted RBP8.54□□□□□ -1.04
SYNE2-210ENST00000553455 FRMD6Q96NE9 622 aa8.54□□□□□ -1.04
SYNE2-210ENST00000553455 MRS2Q9HD23 443 aa8.54□□□□□ -1.04
SYNE2-210ENST00000553455 KANSL3Q9P2N6 904 aa8.54□□□□□ -1.04
SYNE2-210ENST00000553455 VTI1BQ9UEU0 232 aa8.54□□□□□ -1.04
SYNE2-210ENST00000553455 AK5Q9Y6K8 562 aa8.54□□□□□ -1.04
SYNE2-210ENST00000553455 GPR25O00155 361 aa8.53□□□□□ -1.04
SYNE2-210ENST00000553455 CTSHP09668 335 aa8.53□□□□□ -1.04
SYNE2-210ENST00000553455 CES1P23141 567 aa8.53□□□□□ -1.04
SYNE2-210ENST00000553455 OSBPL7Q9BZF2 842 aa8.53□□□□□ -1.04
SYNE2-210ENST00000553455 SPG7Q9UQ90 795 aa8.53□□□□□ -1.04
SYNE2-210ENST00000553455 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.53□□□□□ -1.04
SYNE2-210ENST00000553455 MAP3K6O95382 1288 aa8.52□□□□□ -1.05
SYNE2-210ENST00000553455 HOXD8P13378 290 aaPredicted RBP8.52□□□□□ -1.05
SYNE2-210ENST00000553455 VWA5B2Q8N398 1253 aa8.52□□□□□ -1.05
SYNE2-210ENST00000553455 NANOS1Q8WY41 292 aaKnown RBP8.52□□□□□ -1.05
SYNE2-210ENST00000553455 PMEPA1Q969W9 287 aa8.52□□□□□ -1.05
SYNE2-210ENST00000553455 EFCC1Q9HA90 598 aa8.52□□□□□ -1.05
SYNE2-210ENST00000553455 LATS2Q9NRM7 1088 aa8.52□□□□□ -1.05
SYNE2-210ENST00000553455 CDC14CA4D256 554 aa8.51□□□□□ -1.05
SYNE2-210ENST00000553455 CTBSQ01459 385 aa8.51□□□□□ -1.05
SYNE2-210ENST00000553455 COL13A1Q5TAT6 717 aaPredicted RBP8.51□□□□□ -1.05
SYNE2-210ENST00000553455 PEAR1Q5VY43 1037 aaPredicted RBP8.51□□□□□ -1.05
SYNE2-210ENST00000553455 BHMTQ93088 406 aa8.51□□□□□ -1.05
SYNE2-210ENST00000553455 PNMA5Q96PV4 448 aa8.51□□□□□ -1.05
SYNE2-210ENST00000553455 C12orf49Q9H741 205 aa8.51□□□□□ -1.05
SYNE2-210ENST00000553455 TLR7Q9NYK1 1049 aaKnown RBP8.51□□□□□ -1.05
SYNE2-210ENST00000553455 SALL4Q9UJQ4 1053 aa8.51□□□□□ -1.05
SYNE2-210ENST00000553455 PHF24Q9UPV7 400 aa8.51□□□□□ -1.05
SYNE2-210ENST00000553455 SCAMP3O14828 347 aaKnown RBP8.5□□□□□ -1.05
SYNE2-210ENST00000553455 EIF4BP23588 611 aaKnown RBP8.5□□□□□ -1.05
SYNE2-210ENST00000553455 SOX18P35713 384 aa8.5□□□□□ -1.05
SYNE2-210ENST00000553455 ITGAEP38570 1179 aa8.5□□□□□ -1.05
SYNE2-210ENST00000553455 CRELD1Q96HD1 420 aa8.5□□□□□ -1.05
SYNE2-210ENST00000553455 NLRP2Q9NX02 1062 aa8.5□□□□□ -1.05
SYNE2-210ENST00000553455 PHF20L1A8MW92 1017 aa8.49□□□□□ -1.05
SYNE2-210ENST00000553455 GIPC1O14908 333 aa8.49□□□□□ -1.05
SYNE2-210ENST00000553455 KIF4AO95239 1232 aa8.49□□□□□ -1.05
SYNE2-210ENST00000553455 HDLBPQ00341 1268 aaKnown RBP8.49□□□□□ -1.05
SYNE2-210ENST00000553455 GRM2Q14416 872 aa8.49□□□□□ -1.05
SYNE2-210ENST00000553455 SV2AQ7L0J3 742 aa8.49□□□□□ -1.05
SYNE2-210ENST00000553455 TMEM87AQ8NBN3 555 aa8.49□□□□□ -1.05
SYNE2-210ENST00000553455 TRERF1Q96PN7 1200 aa8.49□□□□□ -1.05
SYNE2-210ENST00000553455 SUV39H2Q9H5I1 410 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms