RNA–Protein interactions for RNA: ENST00000552872.5

MMP19-209, Transcript of matrix metallopeptidase 19, humanhuman

TSL 1 (best)

Gene MMP19, Length 2,350 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-209ENST00000552872 ZNF652Q9Y2D9 606 aa12.58□□□□□ -0.4
MMP19-209ENST00000552872 H7C1W4 665 aa12.58□□□□□ -0.4
MMP19-209ENST00000552872 IRS4O14654 1257 aaPredicted RBP12.58□□□□□ -0.4
MMP19-209ENST00000552872 GTF2E1P29083 439 aaPredicted RBP12.58□□□□□ -0.4
MMP19-209ENST00000552872 DDR1Q08345 913 aa12.58□□□□□ -0.4
MMP19-209ENST00000552872 LMBR1LQ6UX01 489 aa12.58□□□□□ -0.4
MMP19-209ENST00000552872 NBPF5PQ86XG9 351 aaPredicted RBP12.58□□□□□ -0.4
MMP19-209ENST00000552872 ZNF594Q96JF6 807 aaPredicted RBP12.58□□□□□ -0.4
MMP19-209ENST00000552872 SMARCA5O60264 1052 aaPredicted RBP12.57□□□□□ -0.4
MMP19-209ENST00000552872 NTSR2O95665 410 aa12.57□□□□□ -0.4
MMP19-209ENST00000552872 UTP14AQ9BVJ6 771 aaKnown RBP12.57□□□□□ -0.4
MMP19-209ENST00000552872 WWC3Q9ULE0 1092 aa12.57□□□□□ -0.4
MMP19-209ENST00000552872 ABCC12Q96J65 1359 aa12.57□□□□□ -0.4
MMP19-209ENST00000552872 FOXO4P98177 505 aa12.57□□□□□ -0.4
MMP19-209ENST00000552872 HSP90AB3PQ58FF7 597 aa12.57□□□□□ -0.4
MMP19-209ENST00000552872 ZBTB38Q8NAP3 1195 aaPredicted RBP12.57□□□□□ -0.4
MMP19-209ENST00000552872 PRDM4Q9UKN5 801 aa12.57□□□□□ -0.4
MMP19-209ENST00000552872 MMP10P09238 476 aa12.56□□□□□ -0.4
MMP19-209ENST00000552872 ATF5Q9Y2D1 282 aaPredicted RBP12.56□□□□□ -0.4
MMP19-209ENST00000552872 COL4A1P02462 1669 aa12.56□□□□□ -0.4
MMP19-209ENST00000552872 CARMIL3Q8ND23 1372 aa12.56□□□□□ -0.4
MMP19-209ENST00000552872 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.56□□□□□ -0.4
MMP19-209ENST00000552872 PCCAP05165 728 aaPredicted RBP12.55□□□□□ -0.4
MMP19-209ENST00000552872 ADRA2BP18089 450 aa12.55□□□□□ -0.4
MMP19-209ENST00000552872 CLEC4GQ6UXB4 293 aa12.55□□□□□ -0.4
MMP19-209ENST00000552872 GREM2Q9H772 168 aa12.55□□□□□ -0.4
MMP19-209ENST00000552872 NAP1L2Q9ULW6 460 aaPredicted RBP12.55□□□□□ -0.4
MMP19-209ENST00000552872 CASZ1Q86V15 1759 aa12.55□□□□□ -0.4
MMP19-209ENST00000552872 UTYO14607 1347 aa12.55□□□□□ -0.4
MMP19-209ENST00000552872 BRD2P25440 801 aaKnown RBP12.55□□□□□ -0.4
MMP19-209ENST00000552872 RGS3P49796 1198 aa12.55□□□□□ -0.4
MMP19-209ENST00000552872 CCDC125Q86Z20 511 aa12.55□□□□□ -0.4
MMP19-209ENST00000552872 SEC31BQ9NQW1 1179 aa12.55□□□□□ -0.4
MMP19-209ENST00000552872 DDX60Q8IY21 1712 aaKnown RBP12.54□□□□□ -0.4
MMP19-209ENST00000552872 SH3TC1Q8TE82 1336 aa12.54□□□□□ -0.4
MMP19-209ENST00000552872 TRIM28Q13263 835 aaKnown RBP12.54□□□□□ -0.4
MMP19-209ENST00000552872 SERPINB2P05120 415 aa12.54□□□□□ -0.4
MMP19-209ENST00000552872 ATP8B2P98198 1209 aa12.54□□□□□ -0.4
MMP19-209ENST00000552872 C16orf71Q8IYS4 520 aaPredicted RBP12.54□□□□□ -0.4
MMP19-209ENST00000552872 RWDD1Q9H446 243 aaPredicted RBP12.54□□□□□ -0.4
MMP19-209ENST00000552872 SPEF2Q9C093 1822 aa12.53□□□□□ -0.4
MMP19-209ENST00000552872 POLRMTO00411 1230 aaKnown RBP12.53□□□□□ -0.4
MMP19-209ENST00000552872 SURF6O75683 361 aaKnown RBP12.53□□□□□ -0.4
MMP19-209ENST00000552872 PRR5LQ6MZQ0 368 aa12.53□□□□□ -0.4
MMP19-209ENST00000552872 PUS3Q9BZE2 481 aaKnown RBP12.53□□□□□ -0.4
MMP19-209ENST00000552872 LNPKQ9C0E8 428 aa12.53□□□□□ -0.4
MMP19-209ENST00000552872 IL1RAPL2Q9NP60 686 aa12.53□□□□□ -0.4
MMP19-209ENST00000552872 TNRC6CQ9HCJ0 1690 aaKnown RBP12.53□□□□□ -0.4
MMP19-209ENST00000552872 MYH3P11055 1940 aa12.53□□□□□ -0.4
MMP19-209ENST00000552872 TM4SF1P30408 202 aa12.52□□□□□ -0.4
MMP19-209ENST00000552872 ANKRD45Q5TZF3 282 aa12.52□□□□□ -0.4
MMP19-209ENST00000552872 CNBD1Q8NA66 436 aa12.52□□□□□ -0.4
MMP19-209ENST00000552872 CTSWP56202 376 aa12.52□□□□□ -0.41
MMP19-209ENST00000552872 PARP10Q53GL7 1025 aa12.52□□□□□ -0.41
MMP19-209ENST00000552872 TSHZ3Q63HK5 1081 aa12.52□□□□□ -0.41
MMP19-209ENST00000552872 TTLL11Q8NHH1 800 aa12.52□□□□□ -0.41
MMP19-209ENST00000552872 HDAC1Q13547 482 aaPredicted RBP12.51□□□□□ -0.41
MMP19-209ENST00000552872 RPAP2Q8IXW5 612 aaPredicted RBP12.51□□□□□ -0.41
MMP19-209ENST00000552872 OTUD7AQ8TE49 926 aaPredicted RBP12.51□□□□□ -0.41
MMP19-209ENST00000552872 PPP1R1BQ9UD71 204 aaPredicted RBP12.51□□□□□ -0.41
MMP19-209ENST00000552872 PDZRN3Q9UPQ7 1066 aa12.51□□□□□ -0.41
MMP19-209ENST00000552872 ITGA6P23229 1130 aa12.51□□□□□ -0.41
MMP19-209ENST00000552872 OS9Q13438 667 aaPredicted RBP12.51□□□□□ -0.41
MMP19-209ENST00000552872 LRRC24Q50LG9 513 aa12.51□□□□□ -0.41
MMP19-209ENST00000552872 TPTE2Q6XPS3 522 aa12.51□□□□□ -0.41
MMP19-209ENST00000552872 PAXIP1Q6ZW49 1069 aaPredicted RBP12.51□□□□□ -0.41
MMP19-209ENST00000552872 CHMP4BQ9H444 224 aaKnown RBP12.51□□□□□ -0.41
MMP19-209ENST00000552872 COL24A1Q17RW2 1714 aa12.51□□□□□ -0.41
MMP19-209ENST00000552872 LAMB2P55268 1798 aa12.51□□□□□ -0.41
MMP19-209ENST00000552872 WTIPA6NIX2 430 aaPredicted RBP12.5□□□□□ -0.41
MMP19-209ENST00000552872 SNAP23O00161 211 aa12.5□□□□□ -0.41
MMP19-209ENST00000552872 XRCC6P12956 609 aaKnown RBP eCLIP12.5□□□□□ -0.41
MMP19-209ENST00000552872 SSH3Q8TE77 659 aa12.5□□□□□ -0.41
MMP19-209ENST00000552872 PDE8AO60658 829 aa12.5□□□□□ -0.41
MMP19-209ENST00000552872 RFX5P48382 616 aaPredicted RBP12.5□□□□□ -0.41
MMP19-209ENST00000552872 BECN1Q14457 450 aa12.5□□□□□ -0.41
MMP19-209ENST00000552872 NLGN1Q8N2Q7 840 aa12.5□□□□□ -0.41
MMP19-209ENST00000552872 HELBQ8NG08 1087 aaPredicted RBP12.5□□□□□ -0.41
MMP19-209ENST00000552872 IPO4Q8TEX9 1081 aaKnown RBP12.5□□□□□ -0.41
MMP19-209ENST00000552872 PTPN12Q05209 780 aaKnown RBP12.49□□□□□ -0.41
MMP19-209ENST00000552872 POLA2Q14181 598 aa12.49□□□□□ -0.41
MMP19-209ENST00000552872 RABL6Q3YEC7 729 aaPredicted RBP12.49□□□□□ -0.41
MMP19-209ENST00000552872 GOLGA6L3A6NEY3 463 aa12.49□□□□□ -0.41
MMP19-209ENST00000552872 CCDC57Q2TAC2 916 aa12.49□□□□□ -0.41
MMP19-209ENST00000552872 FLAD1Q8NFF5 587 aa12.49□□□□□ -0.41
MMP19-209ENST00000552872 DCTPP1Q9H773 170 aa12.49□□□□□ -0.41
MMP19-209ENST00000552872 PARP3Q9Y6F1 533 aa12.49□□□□□ -0.41
MMP19-209ENST00000552872 OLFM4Q6UX06 510 aa12.48□□□□□ -0.41
MMP19-209ENST00000552872 CDHR2Q9BYE9 1310 aa12.48□□□□□ -0.41
MMP19-209ENST00000552872 HMMRO75330 724 aa12.48□□□□□ -0.41
MMP19-209ENST00000552872 IFIT5Q13325 482 aaKnown RBP12.48□□□□□ -0.41
MMP19-209ENST00000552872 HOMEZQ8IX15 550 aa12.48□□□□□ -0.41
MMP19-209ENST00000552872 CELF1Q92879 486 aaKnown RBP12.48□□□□□ -0.41
MMP19-209ENST00000552872 NYXQ9GZU5 481 aa12.48□□□□□ -0.41
MMP19-209ENST00000552872 CACNA1SQ13698 1873 aa12.47□□□□□ -0.41
MMP19-209ENST00000552872 ANKRD31Q8N7Z5 1873 aa12.47□□□□□ -0.41
MMP19-209ENST00000552872 CSF1RP07333 972 aa12.47□□□□□ -0.41
MMP19-209ENST00000552872 CHRNA5P30532 468 aa12.47□□□□□ -0.41
MMP19-209ENST00000552872 BBXQ8WY36 941 aaPredicted RBP12.47□□□□□ -0.41
MMP19-209ENST00000552872 PANK2Q9BZ23 570 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms