RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 RREB1Q92766 1687 aa10.15□□□□□ -0.78
DEPDC4-210ENST00000551642 NINLQ9Y2I6 1382 aa10.15□□□□□ -0.78
DEPDC4-210ENST00000551642 PIK3CDO00329 1044 aa10.15□□□□□ -0.78
DEPDC4-210ENST00000551642 SCNN1DP51172 638 aa10.15□□□□□ -0.78
DEPDC4-210ENST00000551642 RNFT1Q5M7Z0 435 aa10.15□□□□□ -0.78
DEPDC4-210ENST00000551642 ZNF837Q96EG3 531 aaPredicted RBP10.15□□□□□ -0.78
DEPDC4-210ENST00000551642 TIMMDC1Q9NPL8 285 aa10.15□□□□□ -0.78
DEPDC4-210ENST00000551642 TBX22Q9Y458 520 aa10.15□□□□□ -0.78
DEPDC4-210ENST00000551642 XRN1Q8IZH2 1706 aaKnown RBP10.15□□□□□ -0.78
DEPDC4-210ENST00000551642 SLIT2O94813 1529 aa10.14□□□□□ -0.79
DEPDC4-210ENST00000551642 F11P03951 625 aa10.14□□□□□ -0.79
DEPDC4-210ENST00000551642 INHAP05111 366 aa10.14□□□□□ -0.79
DEPDC4-210ENST00000551642 SLURP2P0DP57 97 aa10.14□□□□□ -0.79
DEPDC4-210ENST00000551642 GTF2E1P29083 439 aaPredicted RBP10.14□□□□□ -0.79
DEPDC4-210ENST00000551642 DBN1Q16643 649 aa10.14□□□□□ -0.79
DEPDC4-210ENST00000551642 PPARGC1BQ86YN6 1023 aaKnown RBP10.14□□□□□ -0.79
DEPDC4-210ENST00000551642 ARHGEF5Q12774 1597 aa10.14□□□□□ -0.79
DEPDC4-210ENST00000551642 GDF10P55107 478 aa10.13□□□□□ -0.79
DEPDC4-210ENST00000551642 EZH2Q15910 746 aaKnown RBP10.13□□□□□ -0.79
DEPDC4-210ENST00000551642 EML3Q32P44 896 aa10.13□□□□□ -0.79
DEPDC4-210ENST00000551642 GNASQ5JWF2 1037 aa10.13□□□□□ -0.79
DEPDC4-210ENST00000551642 TMEM214Q6NUQ4 689 aaKnown RBP10.13□□□□□ -0.79
DEPDC4-210ENST00000551642 DISP2A7MBM2 1401 aa10.13□□□□□ -0.79
DEPDC4-210ENST00000551642 EHBP1L1Q8N3D4 1523 aa10.12□□□□□ -0.79
DEPDC4-210ENST00000551642 A0A1B0GTH6 734 aa10.12□□□□□ -0.79
DEPDC4-210ENST00000551642 SKIP12755 728 aa10.12□□□□□ -0.79
DEPDC4-210ENST00000551642 FOXR1Q6PIV2 292 aa10.12□□□□□ -0.79
DEPDC4-210ENST00000551642 RIPOR1Q6ZS17 1223 aa10.12□□□□□ -0.79
DEPDC4-210ENST00000551642 KRT27Q7Z3Y8 459 aa10.12□□□□□ -0.79
DEPDC4-210ENST00000551642 RHBDD1Q8TEB9 315 aa10.12□□□□□ -0.79
DEPDC4-210ENST00000551642 GAS2L1Q99501 681 aaPredicted RBP10.12□□□□□ -0.79
DEPDC4-210ENST00000551642 PCDHGA11Q9Y5H2 935 aa10.12□□□□□ -0.79
DEPDC4-210ENST00000551642 CEP162Q5TB80 1403 aa10.12□□□□□ -0.79
DEPDC4-210ENST00000551642 MTUS2Q5JR59 1369 aa10.12□□□□□ -0.79
DEPDC4-210ENST00000551642 FYCO1Q9BQS8 1478 aa10.11□□□□□ -0.79
DEPDC4-210ENST00000551642 POM121CA8CG34 1229 aa10.11□□□□□ -0.79
DEPDC4-210ENST00000551642 TLR1Q15399 786 aa10.11□□□□□ -0.79
DEPDC4-210ENST00000551642 UNC5CLQ8IV45 518 aa10.11□□□□□ -0.79
DEPDC4-210ENST00000551642 ADAMTS19Q8TE59 1207 aa10.11□□□□□ -0.79
DEPDC4-210ENST00000551642 SLC4A9Q96Q91 983 aa10.11□□□□□ -0.79
DEPDC4-210ENST00000551642 NOD1Q9Y239 953 aa10.11□□□□□ -0.79
DEPDC4-210ENST00000551642 TMEM131LA2VDJ0 1609 aa10.11□□□□□ -0.79
DEPDC4-210ENST00000551642 NOS1P29475 1434 aa10.1□□□□□ -0.79
DEPDC4-210ENST00000551642 RIMS2Q9UQ26 1411 aa10.1□□□□□ -0.79
DEPDC4-210ENST00000551642 PLCH1Q4KWH8 1693 aa10.1□□□□□ -0.79
DEPDC4-210ENST00000551642 TMEM229AB2RXF0 380 aa10.1□□□□□ -0.79
DEPDC4-210ENST00000551642 PPP1R15AO75807 674 aaPredicted RBP10.1□□□□□ -0.79
DEPDC4-210ENST00000551642 STAU1O95793 577 aaKnown RBP10.1□□□□□ -0.79
DEPDC4-210ENST00000551642 SRSF11Q05519 484 aaKnown RBP10.1□□□□□ -0.79
DEPDC4-210ENST00000551642 GAS6Q14393 721 aa10.1□□□□□ -0.79
DEPDC4-210ENST00000551642 LBRQ14739 615 aaKnown RBP10.1□□□□□ -0.79
DEPDC4-210ENST00000551642 C4orf17Q53FE4 359 aa10.1□□□□□ -0.79
DEPDC4-210ENST00000551642 GOLGB1Q14789 3259 aaKnown RBP10.09□□□□□ -0.79
DEPDC4-210ENST00000551642 MYOM1P52179 1685 aa10.09□□□□□ -0.79
DEPDC4-210ENST00000551642 SMTNP53814 917 aa10.09□□□□□ -0.79
DEPDC4-210ENST00000551642 MTFR1Q15390 333 aa10.09□□□□□ -0.79
DEPDC4-210ENST00000551642 AMOTL2Q9Y2J4 779 aa10.09□□□□□ -0.79
DEPDC4-210ENST00000551642 PIK3R4Q99570 1358 aa10.09□□□□□ -0.79
DEPDC4-210ENST00000551642 C1orf167Q5SNV9 1468 aa10.09□□□□□ -0.79
DEPDC4-210ENST00000551642 NRKQ7Z2Y5 1582 aa10.09□□□□□ -0.79
DEPDC4-210ENST00000551642 PTPN23Q9H3S7 1636 aa10.08□□□□□ -0.8
DEPDC4-210ENST00000551642 NRXN3Q9Y4C0 1643 aa10.08□□□□□ -0.8
DEPDC4-210ENST00000551642 SHANK3Q9BYB0 1731 aa10.08□□□□□ -0.8
DEPDC4-210ENST00000551642 NCOA4Q13772 614 aa10.08□□□□□ -0.8
DEPDC4-210ENST00000551642 HDGFL1Q5TGJ6 251 aa10.08□□□□□ -0.8
DEPDC4-210ENST00000551642 PLEKHM2Q8IWE5 1019 aa10.08□□□□□ -0.8
DEPDC4-210ENST00000551642 CAMKK2Q96RR4 588 aa10.08□□□□□ -0.8
DEPDC4-210ENST00000551642 NUCKS1Q9H1E3 243 aaKnown RBP10.08□□□□□ -0.8
DEPDC4-210ENST00000551642 PPP1R1BQ9UD71 204 aaPredicted RBP10.08□□□□□ -0.8
DEPDC4-210ENST00000551642 NWD2Q9ULI1 1742 aa10.07□□□□□ -0.8
DEPDC4-210ENST00000551642 CASZ1Q86V15 1759 aa10.07□□□□□ -0.8
DEPDC4-210ENST00000551642 USP17L5A8MUK1 530 aa10.07□□□□□ -0.8
DEPDC4-210ENST00000551642 PHKA2P46019 1235 aa10.07□□□□□ -0.8
DEPDC4-210ENST00000551642 FAM182BQ5T319 152 aa10.07□□□□□ -0.8
DEPDC4-210ENST00000551642 TRERF1Q96PN7 1200 aa10.07□□□□□ -0.8
DEPDC4-210ENST00000551642 MBIPQ9NS73 344 aa10.07□□□□□ -0.8
DEPDC4-210ENST00000551642 ADGRL3Q9HAR2 1447 aa10.07□□□□□ -0.8
DEPDC4-210ENST00000551642 A6NJR5 290 aa10.06□□□□□ -0.8
DEPDC4-210ENST00000551642 GTF2IP78347 998 aa10.06□□□□□ -0.8
DEPDC4-210ENST00000551642 ZNF385CQ66K41 422 aaPredicted RBP10.06□□□□□ -0.8
DEPDC4-210ENST00000551642 GTPBP3Q969Y2 492 aaKnown RBP10.06□□□□□ -0.8
DEPDC4-210ENST00000551642 CLUAP1Q96AJ1 413 aa10.06□□□□□ -0.8
DEPDC4-210ENST00000551642 ORAI2Q96SN7 254 aa10.06□□□□□ -0.8
DEPDC4-210ENST00000551642 USP32Q8NFA0 1604 aa10.06□□□□□ -0.8
DEPDC4-210ENST00000551642 CDK2AP1O14519 115 aa10.05□□□□□ -0.8
DEPDC4-210ENST00000551642 BACH1O14867 736 aa10.05□□□□□ -0.8
DEPDC4-210ENST00000551642 KCNQ2O43526 872 aa10.05□□□□□ -0.8
DEPDC4-210ENST00000551642 C1orf216Q8TAB5 229 aa10.05□□□□□ -0.8
DEPDC4-210ENST00000551642 UCN2Q96RP3 112 aa10.05□□□□□ -0.8
DEPDC4-210ENST00000551642 CFHR5Q9BXR6 569 aa10.05□□□□□ -0.8
DEPDC4-210ENST00000551642 NIFKQ9BYG3 293 aaKnown RBP10.05□□□□□ -0.8
DEPDC4-210ENST00000551642 SPON1Q9HCB6 807 aa10.05□□□□□ -0.8
DEPDC4-210ENST00000551642 LMTK2Q8IWU2 1503 aa10.05□□□□□ -0.8
DEPDC4-210ENST00000551642 PXDNQ92626 1479 aa10.04□□□□□ -0.8
DEPDC4-210ENST00000551642 DUOX2Q9NRD8 1548 aa10.04□□□□□ -0.8
DEPDC4-210ENST00000551642 A6NJY4 79 aa10.04□□□□□ -0.8
DEPDC4-210ENST00000551642 ATP9BO43861 1147 aa10.04□□□□□ -0.8
DEPDC4-210ENST00000551642 THBS1P07996 1170 aa10.04□□□□□ -0.8
DEPDC4-210ENST00000551642 MSX1P28360 303 aa10.04□□□□□ -0.8
DEPDC4-210ENST00000551642 TRIM50Q86XT4 487 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms