RNA–Protein interactions for RNA: ENST00000551604.2

CUX2-203, Transcript of cut like homeobox 2, humanhuman

TSL 5

Gene CUX2, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-203ENST00000551604 KRT76Q01546 638 aa7.9□□□□□ -1.14
CUX2-203ENST00000551604 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.9□□□□□ -1.14
CUX2-203ENST00000551604 ARSJQ5FYB0 599 aaPredicted RBP7.9□□□□□ -1.14
CUX2-203ENST00000551604 ZNF654Q8IZM8 581 aa7.9□□□□□ -1.14
CUX2-203ENST00000551604 PMEPA1Q969W9 287 aa7.9□□□□□ -1.14
CUX2-203ENST00000551604 TINF2Q9BSI4 451 aa7.9□□□□□ -1.14
CUX2-203ENST00000551604 C12orf49Q9H741 205 aa7.9□□□□□ -1.14
CUX2-203ENST00000551604 FAM8A1Q9UBU6 413 aa7.9□□□□□ -1.14
CUX2-203ENST00000551604 A0A1B0GTH6 734 aa7.89□□□□□ -1.15
CUX2-203ENST00000551604 A6NHS1 94 aa7.89□□□□□ -1.15
CUX2-203ENST00000551604 FIGNL2A6NMB9 653 aa7.89□□□□□ -1.15
CUX2-203ENST00000551604 UBAP1LF5GYI3 381 aa7.89□□□□□ -1.15
CUX2-203ENST00000551604 OPLAHO14841 1288 aa7.89□□□□□ -1.15
CUX2-203ENST00000551604 HSP90B1P14625 803 aaKnown RBP7.89□□□□□ -1.15
CUX2-203ENST00000551604 PHKA2P46019 1235 aa7.89□□□□□ -1.15
CUX2-203ENST00000551604 GSK3AP49840 483 aa7.89□□□□□ -1.15
CUX2-203ENST00000551604 SUZ12Q15022 739 aaKnown RBP7.89□□□□□ -1.15
CUX2-203ENST00000551604 BTLAQ7Z6A9 289 aa7.89□□□□□ -1.15
CUX2-203ENST00000551604 VPS37DQ86XT2 251 aa7.89□□□□□ -1.15
CUX2-203ENST00000551604 CMTR1Q8N1G2 835 aaKnown RBP7.89□□□□□ -1.15
CUX2-203ENST00000551604 CCDC74AQ96AQ1 378 aa7.89□□□□□ -1.15
CUX2-203ENST00000551604 ARMC5Q96C12 935 aa7.89□□□□□ -1.15
CUX2-203ENST00000551604 CNTNAP3BQ96NU0 1288 aa7.89□□□□□ -1.15
CUX2-203ENST00000551604 CNTNAP3Q9BZ76 1288 aa7.89□□□□□ -1.15
CUX2-203ENST00000551604 C11orf16Q9NQ32 467 aa7.89□□□□□ -1.15
CUX2-203ENST00000551604 PPP4R2Q9NY27 417 aa7.89□□□□□ -1.15
CUX2-203ENST00000551604 PRKAG2Q9UGJ0 569 aa7.89□□□□□ -1.15
CUX2-203ENST00000551604 DMGDHQ9UI17 866 aaKnown RBP7.89□□□□□ -1.15
CUX2-203ENST00000551604 RTCBQ9Y3I0 505 aaKnown RBP7.89□□□□□ -1.15
CUX2-203ENST00000551604 GJA3Q9Y6H8 435 aa7.89□□□□□ -1.15
CUX2-203ENST00000551604 INPP5BP32019 993 aa7.88□□□□□ -1.15
CUX2-203ENST00000551604 C7orf43Q8WVR3 580 aa7.88□□□□□ -1.15
CUX2-203ENST00000551604 ELP3Q9H9T3 547 aa7.88□□□□□ -1.15
CUX2-203ENST00000551604 ZFYVE28Q9HCC9 887 aa7.88□□□□□ -1.15
CUX2-203ENST00000551604 INPP5FQ9Y2H2 1132 aa7.88□□□□□ -1.15
CUX2-203ENST00000551604 CTSHP09668 335 aa7.87□□□□□ -1.15
CUX2-203ENST00000551604 ST13P50502 369 aaKnown RBP7.87□□□□□ -1.15
CUX2-203ENST00000551604 PTSQ03393 145 aa7.87□□□□□ -1.15
CUX2-203ENST00000551604 KCNMA1Q12791 1236 aa7.87□□□□□ -1.15
CUX2-203ENST00000551604 TAF1CQ15572 869 aaPredicted RBP7.87□□□□□ -1.15
CUX2-203ENST00000551604 LYSMD3Q7Z3D4 306 aa7.87□□□□□ -1.15
CUX2-203ENST00000551604 USP48Q86UV5 1035 aa7.87□□□□□ -1.15
CUX2-203ENST00000551604 FAM177A1Q8N128 213 aaPredicted RBP7.87□□□□□ -1.15
CUX2-203ENST00000551604 ZNF280CQ8ND82 737 aa7.87□□□□□ -1.15
CUX2-203ENST00000551604 HSH2DQ96JZ2 352 aa7.87□□□□□ -1.15
CUX2-203ENST00000551604 PUS7Q96PZ0 661 aaKnown RBP7.87□□□□□ -1.15
CUX2-203ENST00000551604 ACBD3Q9H3P7 528 aa7.87□□□□□ -1.15
CUX2-203ENST00000551604 USP31Q70CQ4 1352 aa7.86□□□□□ -1.15
CUX2-203ENST00000551604 TTLL8A6PVC2 850 aa7.86□□□□□ -1.15
CUX2-203ENST00000551604 PTPN12Q05209 780 aaKnown RBP7.86□□□□□ -1.15
CUX2-203ENST00000551604 POU4F2Q12837 409 aa7.86□□□□□ -1.15
CUX2-203ENST00000551604 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.86□□□□□ -1.15
CUX2-203ENST00000551604 TIMMDC1Q9NPL8 285 aa7.86□□□□□ -1.15
CUX2-203ENST00000551604 GGT7Q9UJ14 662 aa7.86□□□□□ -1.15
CUX2-203ENST00000551604 FOXD3Q9UJU5 478 aaPredicted RBP7.86□□□□□ -1.15
CUX2-203ENST00000551604 DDX41Q9UJV9 622 aaKnown RBP7.86□□□□□ -1.15
CUX2-203ENST00000551604 GADD45BO75293 160 aaPredicted RBP7.85□□□□□ -1.15
CUX2-203ENST00000551604 CTSOP43234 321 aaPredicted RBP7.85□□□□□ -1.15
CUX2-203ENST00000551604 ARID5AQ03989 594 aa7.85□□□□□ -1.15
CUX2-203ENST00000551604 LRRC69Q6ZNQ3 347 aa7.85□□□□□ -1.15
CUX2-203ENST00000551604 PRICKLE2Q7Z3G6 844 aa7.85□□□□□ -1.15
CUX2-203ENST00000551604 GMLQ99445 158 aa7.85□□□□□ -1.15
CUX2-203ENST00000551604 COL25A1Q9BXS0 654 aaPredicted RBP7.85□□□□□ -1.15
CUX2-203ENST00000551604 ATP4AP20648 1035 aa7.84□□□□□ -1.15
CUX2-203ENST00000551604 DNAJA1P31689 397 aaKnown RBP7.84□□□□□ -1.15
CUX2-203ENST00000551604 SOGA3Q5TF21 947 aa7.84□□□□□ -1.15
CUX2-203ENST00000551604 PGBD3Q8N328 593 aa7.84□□□□□ -1.15
CUX2-203ENST00000551604 EPS8L3Q8TE67 593 aaKnown RBP7.84□□□□□ -1.15
CUX2-203ENST00000551604 SPATA32Q96LK8 384 aa7.84□□□□□ -1.15
CUX2-203ENST00000551604 CEP63Q96MT8 703 aa7.84□□□□□ -1.15
CUX2-203ENST00000551604 ZIC5Q96T25 663 aa7.84□□□□□ -1.15
CUX2-203ENST00000551604 CUEDC1Q9NWM3 386 aaPredicted RBP7.84□□□□□ -1.15
CUX2-203ENST00000551604 ABI2Q9NYB9 513 aaPredicted RBP7.84□□□□□ -1.15
CUX2-203ENST00000551604 ADAMTS8Q9UP79 889 aa7.84□□□□□ -1.15
CUX2-203ENST00000551604 KCNMB2Q9Y691 235 aa7.84□□□□□ -1.15
CUX2-203ENST00000551604 XYLBO75191 536 aa7.83□□□□□ -1.16
CUX2-203ENST00000551604 USP17L7P0C7H9 530 aa7.83□□□□□ -1.16
CUX2-203ENST00000551604 RASSF7Q02833 373 aa7.83□□□□□ -1.16
CUX2-203ENST00000551604 TTC39BQ5VTQ0 682 aaPredicted RBP7.83□□□□□ -1.16
CUX2-203ENST00000551604 USPL1Q5W0Q7 1092 aa7.83□□□□□ -1.16
CUX2-203ENST00000551604 GALNT12Q8IXK2 581 aa7.83□□□□□ -1.16
CUX2-203ENST00000551604 RNF217Q8TC41 542 aa7.83□□□□□ -1.16
CUX2-203ENST00000551604 OSBPL7Q9BZF2 842 aa7.83□□□□□ -1.16
CUX2-203ENST00000551604 NPHS2Q9NP85 383 aa7.83□□□□□ -1.16
CUX2-203ENST00000551604 TRAK1Q9UPV9 953 aa7.83□□□□□ -1.16
CUX2-203ENST00000551604 A0A1W2PNR3 127 aa7.82□□□□□ -1.16
CUX2-203ENST00000551604 GDF11O95390 407 aa7.82□□□□□ -1.16
CUX2-203ENST00000551604 EGFRP00533 1210 aa7.82□□□□□ -1.16
CUX2-203ENST00000551604 MSX1P28360 303 aa7.82□□□□□ -1.16
CUX2-203ENST00000551604 GSTT1P30711 240 aa7.82□□□□□ -1.16
CUX2-203ENST00000551604 GTF2F1P35269 517 aaKnown RBP eCLIP7.82□□□□□ -1.16
CUX2-203ENST00000551604 TRIP4Q15650 581 aaPredicted RBP7.82□□□□□ -1.16
CUX2-203ENST00000551604 ZNF394Q53GI3 561 aa7.82□□□□□ -1.16
CUX2-203ENST00000551604 RNFT1Q5M7Z0 435 aa7.82□□□□□ -1.16
CUX2-203ENST00000551604 NLRP13Q86W25 1043 aa7.82□□□□□ -1.16
CUX2-203ENST00000551604 TMEM151AQ8N4L1 468 aa7.82□□□□□ -1.16
CUX2-203ENST00000551604 CCDC155Q8N6L0 562 aa7.82□□□□□ -1.16
CUX2-203ENST00000551604 HIRIP3Q9BW71 556 aaPredicted RBP7.82□□□□□ -1.16
CUX2-203ENST00000551604 BCO2Q9BYV7 579 aa7.82□□□□□ -1.16
CUX2-203ENST00000551604 TMEM63CQ9P1W3 806 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms