RNA–Protein interactions for RNA: ENST00000549100.5

DEPDC4-206, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-206ENST00000549100 CDCA7Q9BWT1 371 aaPredicted RBP3.85□□□□□ -1.79
DEPDC4-206ENST00000549100 UNC13AQ9UPW8 1703 aa3.84□□□□□ -1.79
DEPDC4-206ENST00000549100 ZBTB7CA1YPR0 619 aa3.84□□□□□ -1.79
DEPDC4-206ENST00000549100 FAM196BA6NMK8 535 aa3.84□□□□□ -1.79
DEPDC4-206ENST00000549100 PTCD1O75127 700 aaKnown RBP3.84□□□□□ -1.79
DEPDC4-206ENST00000549100 RASA1P20936 1047 aa3.84□□□□□ -1.79
DEPDC4-206ENST00000549100 ELOAQ14241 798 aaKnown RBP3.84□□□□□ -1.79
DEPDC4-206ENST00000549100 EML3Q32P44 896 aa3.84□□□□□ -1.79
DEPDC4-206ENST00000549100 MAP7D1Q3KQU3 841 aa3.84□□□□□ -1.79
DEPDC4-206ENST00000549100 OXLD1Q5BKU9 147 aa3.84□□□□□ -1.79
DEPDC4-206ENST00000549100 SLAIN2Q9P270 581 aa3.84□□□□□ -1.79
DEPDC4-206ENST00000549100 NOVA2Q9UNW9 492 aaKnown RBP3.84□□□□□ -1.79
DEPDC4-206ENST00000549100 DOLKQ9UPQ8 538 aa3.84□□□□□ -1.79
DEPDC4-206ENST00000549100 KIAA1024Q9UPX6 916 aa3.84□□□□□ -1.79
DEPDC4-206ENST00000549100 RAXQ9Y2V3 346 aa3.84□□□□□ -1.79
DEPDC4-206ENST00000549100 LZTS3O60299 673 aaPredicted RBP3.83□□□□□ -1.8
DEPDC4-206ENST00000549100 DKK1O94907 266 aa3.83□□□□□ -1.8
DEPDC4-206ENST00000549100 HOXA10P31260 410 aaPredicted RBP3.83□□□□□ -1.8
DEPDC4-206ENST00000549100 SAMD5Q5TGI4 173 aa3.83□□□□□ -1.8
DEPDC4-206ENST00000549100 IGF2-ASQ6U949 168 aa3.83□□□□□ -1.8
DEPDC4-206ENST00000549100 CILP2Q8IUL8 1156 aa3.83□□□□□ -1.8
DEPDC4-206ENST00000549100 OGFOD1Q8N543 542 aa3.83□□□□□ -1.8
DEPDC4-206ENST00000549100 ZNF594Q96JF6 807 aaPredicted RBP3.83□□□□□ -1.8
DEPDC4-206ENST00000549100 ETNK1Q9HBU6 452 aa3.83□□□□□ -1.8
DEPDC4-206ENST00000549100 EIF4G1Q04637 1599 aaKnown RBP3.83□□□□□ -1.8
DEPDC4-206ENST00000549100 ZBTB7BO15156 539 aaPredicted RBP3.82□□□□□ -1.8
DEPDC4-206ENST00000549100 DEAF1O75398 565 aaPredicted RBP3.82□□□□□ -1.8
DEPDC4-206ENST00000549100 BRD1O95696 1058 aa3.82□□□□□ -1.8
DEPDC4-206ENST00000549100 GRIK1P39086 918 aa3.82□□□□□ -1.8
DEPDC4-206ENST00000549100 GTF2IP78347 998 aa3.82□□□□□ -1.8
DEPDC4-206ENST00000549100 PDE4CQ08493 712 aa3.82□□□□□ -1.8
DEPDC4-206ENST00000549100 FAM69CQ0P6D2 419 aa3.82□□□□□ -1.8
DEPDC4-206ENST00000549100 DPYDQ12882 1025 aa3.82□□□□□ -1.8
DEPDC4-206ENST00000549100 TLR1Q15399 786 aa3.82□□□□□ -1.8
DEPDC4-206ENST00000549100 LARP1Q6PKG0 1096 aaKnown RBP3.82□□□□□ -1.8
DEPDC4-206ENST00000549100 ANKMY2Q8IV38 441 aa3.82□□□□□ -1.8
DEPDC4-206ENST00000549100 AKTIPQ9H8T0 292 aa3.82□□□□□ -1.8
DEPDC4-206ENST00000549100 NOD1Q9Y239 953 aa3.82□□□□□ -1.8
DEPDC4-206ENST00000549100 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.82□□□□□ -1.8
DEPDC4-206ENST00000549100 NACADO15069 1562 aa3.81□□□□□ -1.8
DEPDC4-206ENST00000549100 SPEM2Q0P670 501 aa3.81□□□□□ -1.8
DEPDC4-206ENST00000549100 NFIAQ12857 509 aa3.81□□□□□ -1.8
DEPDC4-206ENST00000549100 RNF20Q5VTR2 975 aa3.81□□□□□ -1.8
DEPDC4-206ENST00000549100 PHLDB3Q6NSJ2 640 aa3.81□□□□□ -1.8
DEPDC4-206ENST00000549100 ESF1Q9H501 851 aaKnown RBP3.81□□□□□ -1.8
DEPDC4-206ENST00000549100 STOML1Q9UBI4 398 aa3.81□□□□□ -1.8
DEPDC4-206ENST00000549100 NAGPAQ9UK23 515 aa3.81□□□□□ -1.8
DEPDC4-206ENST00000549100 PCDHGA11Q9Y5H2 935 aa3.81□□□□□ -1.8
DEPDC4-206ENST00000549100 SFI1A8K8P3 1242 aa3.8□□□□□ -1.8
DEPDC4-206ENST00000549100 GSC2O15499 205 aa3.8□□□□□ -1.8
DEPDC4-206ENST00000549100 LGR5O75473 907 aa3.8□□□□□ -1.8
DEPDC4-206ENST00000549100 ATP1A2P50993 1020 aa3.8□□□□□ -1.8
DEPDC4-206ENST00000549100 PLAURQ03405 335 aa3.8□□□□□ -1.8
DEPDC4-206ENST00000549100 KCNA1Q09470 495 aa3.8□□□□□ -1.8
DEPDC4-206ENST00000549100 GRIK5Q16478 980 aa3.8□□□□□ -1.8
DEPDC4-206ENST00000549100 MSL1Q68DK7 614 aa3.8□□□□□ -1.8
DEPDC4-206ENST00000549100 PSAPL1Q6NUJ1 521 aa3.8□□□□□ -1.8
DEPDC4-206ENST00000549100 TRIM50Q86XT4 487 aa3.8□□□□□ -1.8
DEPDC4-206ENST00000549100 CCDC125Q86Z20 511 aa3.8□□□□□ -1.8
DEPDC4-206ENST00000549100 SIX5Q8N196 739 aa3.8□□□□□ -1.8
DEPDC4-206ENST00000549100 LARGE2Q8N3Y3 721 aa3.8□□□□□ -1.8
DEPDC4-206ENST00000549100 TPCN2Q8NHX9 752 aa3.8□□□□□ -1.8
DEPDC4-206ENST00000549100 FAM200AQ8TCP9 573 aa3.8□□□□□ -1.8
DEPDC4-206ENST00000549100 C7orf43Q8WVR3 580 aa3.8□□□□□ -1.8
DEPDC4-206ENST00000549100 UBL7Q96S82 380 aaPredicted RBP3.8□□□□□ -1.8
DEPDC4-206ENST00000549100 GZF1Q9H116 711 aaPredicted RBP3.8□□□□□ -1.8
DEPDC4-206ENST00000549100 SLC6A14Q9UN76 642 aa3.8□□□□□ -1.8
DEPDC4-206ENST00000549100 GJA3Q9Y6H8 435 aa3.8□□□□□ -1.8
DEPDC4-206ENST00000549100 IVNS1ABPQ9Y6Y0 642 aa3.8□□□□□ -1.8
DEPDC4-206ENST00000549100 RUSC2Q8N2Y8 1516 aa3.8□□□□□ -1.8
DEPDC4-206ENST00000549100 CARMIL2Q6F5E8 1435 aa3.79□□□□□ -1.8
DEPDC4-206ENST00000549100 F8W735 103 aaPredicted RBP3.79□□□□□ -1.8
DEPDC4-206ENST00000549100 PAPLNO95428 1278 aa3.79□□□□□ -1.8
DEPDC4-206ENST00000549100 JUNBP17275 347 aaPredicted RBP3.79□□□□□ -1.8
DEPDC4-206ENST00000549100 SSFA2P28290 1259 aa3.79□□□□□ -1.8
DEPDC4-206ENST00000549100 SCNN1AP37088 669 aa3.79□□□□□ -1.8
DEPDC4-206ENST00000549100 PSME1Q06323 249 aa3.79□□□□□ -1.8
DEPDC4-206ENST00000549100 USP4Q13107 963 aa3.79□□□□□ -1.8
DEPDC4-206ENST00000549100 CCDC102BQ68D86 513 aa3.79□□□□□ -1.8
DEPDC4-206ENST00000549100 LCNL1Q6ZST4 164 aa3.79□□□□□ -1.8
DEPDC4-206ENST00000549100 CLP1Q92989 425 aaKnown RBP3.79□□□□□ -1.8
DEPDC4-206ENST00000549100 NIFKQ9BYG3 293 aaKnown RBP3.79□□□□□ -1.8
DEPDC4-206ENST00000549100 USP3Q9Y6I4 520 aa3.79□□□□□ -1.8
DEPDC4-206ENST00000549100 ABCC8Q09428 1581 aa3.79□□□□□ -1.8
DEPDC4-206ENST00000549100 BICRAQ9NZM4 1560 aa3.79□□□□□ -1.8
DEPDC4-206ENST00000549100 DLL1O00548 723 aa3.78□□□□□ -1.8
DEPDC4-206ENST00000549100 SEC13P55735 322 aa3.78□□□□□ -1.8
DEPDC4-206ENST00000549100 TBC1D8BQ0IIM8 1120 aa3.78□□□□□ -1.8
DEPDC4-206ENST00000549100 SWI5Q1ZZU3 235 aa3.78□□□□□ -1.8
DEPDC4-206ENST00000549100 KRTAP19-4Q3LI73 84 aa3.78□□□□□ -1.8
DEPDC4-206ENST00000549100 LRRC69Q6ZNQ3 347 aa3.78□□□□□ -1.8
DEPDC4-206ENST00000549100 TRIM42Q8IWZ5 723 aa3.78□□□□□ -1.8
DEPDC4-206ENST00000549100 ARMC10Q8N2F6 343 aa3.78□□□□□ -1.8
DEPDC4-206ENST00000549100 AGGF1Q8N302 714 aaeCLIP3.78□□□□□ -1.8
DEPDC4-206ENST00000549100 IGFLR1Q9H665 355 aa3.78□□□□□ -1.8
DEPDC4-206ENST00000549100 CCDC88BA6NC98 1476 aa3.78□□□□□ -1.8
DEPDC4-206ENST00000549100 HMX2A2RU54 273 aa3.77□□□□□ -1.81
DEPDC4-206ENST00000549100 TMEM229AB2RXF0 380 aa3.77□□□□□ -1.81
DEPDC4-206ENST00000549100 PRMT3O60678 531 aa3.77□□□□□ -1.81
DEPDC4-206ENST00000549100 MYCP01106 439 aaPredicted RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms