RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 CCINQ13939 588 aa6.89□□□□□ -1.31
PTCH1-216ENST00000548379 FAM182BQ5T319 152 aa6.89□□□□□ -1.31
PTCH1-216ENST00000548379 Q6ZNB5 142 aa6.89□□□□□ -1.31
PTCH1-216ENST00000548379 TMC4Q7Z404 712 aa6.89□□□□□ -1.31
PTCH1-216ENST00000548379 ZNF438Q7Z4V0 828 aa6.89□□□□□ -1.31
PTCH1-216ENST00000548379 DUSP9Q99956 384 aaKnown RBP6.89□□□□□ -1.31
PTCH1-216ENST00000548379 EFCC1Q9HA90 598 aa6.89□□□□□ -1.31
PTCH1-216ENST00000548379 RNF19AQ9NV58 838 aa6.89□□□□□ -1.31
PTCH1-216ENST00000548379 C11orf95C9JLR9 678 aaPredicted RBP6.88□□□□□ -1.31
PTCH1-216ENST00000548379 DAB2P98082 770 aa6.88□□□□□ -1.31
PTCH1-216ENST00000548379 ATP2B2Q01814 1243 aa6.88□□□□□ -1.31
PTCH1-216ENST00000548379 GRIN2CQ14957 1233 aa6.88□□□□□ -1.31
PTCH1-216ENST00000548379 ABHD17AQ96GS6 310 aa6.88□□□□□ -1.31
PTCH1-216ENST00000548379 ABI2Q9NYB9 513 aaPredicted RBP6.88□□□□□ -1.31
PTCH1-216ENST00000548379 MARK1Q9P0L2 795 aa6.88□□□□□ -1.31
PTCH1-216ENST00000548379 CNTN3Q9P232 1028 aa6.88□□□□□ -1.31
PTCH1-216ENST00000548379 PARP2Q9UGN5 583 aa6.88□□□□□ -1.31
PTCH1-216ENST00000548379 POTECB2RU33 542 aa6.87□□□□□ -1.31
PTCH1-216ENST00000548379 RECKO95980 971 aa6.87□□□□□ -1.31
PTCH1-216ENST00000548379 HOXD8P13378 290 aaPredicted RBP6.87□□□□□ -1.31
PTCH1-216ENST00000548379 VEGFBP49765 207 aa6.87□□□□□ -1.31
PTCH1-216ENST00000548379 LDLRAD1Q5T700 205 aa6.87□□□□□ -1.31
PTCH1-216ENST00000548379 USPL1Q5W0Q7 1092 aa6.87□□□□□ -1.31
PTCH1-216ENST00000548379 C1orf127Q8N9H9 656 aa6.87□□□□□ -1.31
PTCH1-216ENST00000548379 GTPBP3Q969Y2 492 aaKnown RBP6.87□□□□□ -1.31
PTCH1-216ENST00000548379 ZFATQ9P243 1243 aa6.87□□□□□ -1.31
PTCH1-216ENST00000548379 PHACTR2O75167 634 aa6.86□□□□□ -1.31
PTCH1-216ENST00000548379 SASH3O75995 380 aa6.86□□□□□ -1.31
PTCH1-216ENST00000548379 MAP3K6O95382 1288 aa6.86□□□□□ -1.31
PTCH1-216ENST00000548379 TARSP26639 723 aaKnown RBP6.86□□□□□ -1.31
PTCH1-216ENST00000548379 GNA15P30679 374 aa6.86□□□□□ -1.31
PTCH1-216ENST00000548379 GALNT12Q8IXK2 581 aa6.86□□□□□ -1.31
PTCH1-216ENST00000548379 OR13H1Q8NG92 308 aa6.86□□□□□ -1.31
PTCH1-216ENST00000548379 CCDC74AQ96AQ1 378 aa6.86□□□□□ -1.31
PTCH1-216ENST00000548379 FRMD6Q96NE9 622 aa6.86□□□□□ -1.31
PTCH1-216ENST00000548379 SLC30A3Q99726 388 aa6.86□□□□□ -1.31
PTCH1-216ENST00000548379 MMP20O60882 483 aa6.85□□□□□ -1.31
PTCH1-216ENST00000548379 SPEM2Q0P670 501 aa6.85□□□□□ -1.31
PTCH1-216ENST00000548379 PMEPA1Q969W9 287 aa6.85□□□□□ -1.31
PTCH1-216ENST00000548379 PHF24Q9UPV7 400 aa6.85□□□□□ -1.31
PTCH1-216ENST00000548379 EREGO14944 169 aa6.84□□□□□ -1.31
PTCH1-216ENST00000548379 CD33P20138 364 aa6.84□□□□□ -1.31
PTCH1-216ENST00000548379 FGFR3P22607 806 aa6.84□□□□□ -1.31
PTCH1-216ENST00000548379 SOX18P35713 384 aa6.84□□□□□ -1.31
PTCH1-216ENST00000548379 XPCQ01831 940 aaPredicted RBP6.84□□□□□ -1.31
PTCH1-216ENST00000548379 TTC39BQ5VTQ0 682 aaPredicted RBP6.84□□□□□ -1.31
PTCH1-216ENST00000548379 VWA5B2Q8N398 1253 aa6.84□□□□□ -1.31
PTCH1-216ENST00000548379 SALL4Q9UJQ4 1053 aa6.84□□□□□ -1.31
PTCH1-216ENST00000548379 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.84□□□□□ -1.31
PTCH1-216ENST00000548379 NISCHQ9Y2I1 1504 aa6.84□□□□□ -1.31
PTCH1-216ENST00000548379 KIF4AO95239 1232 aa6.83□□□□□ -1.32
PTCH1-216ENST00000548379 CYP2E1P05181 493 aaPredicted RBP6.83□□□□□ -1.32
PTCH1-216ENST00000548379 RARAP10276 462 aa6.83□□□□□ -1.32
PTCH1-216ENST00000548379 CTBSQ01459 385 aa6.83□□□□□ -1.32
PTCH1-216ENST00000548379 SV2AQ7L0J3 742 aa6.83□□□□□ -1.32
PTCH1-216ENST00000548379 NPAS3Q8IXF0 933 aa6.83□□□□□ -1.32
PTCH1-216ENST00000548379 EPS8L3Q8TE67 593 aaKnown RBP6.83□□□□□ -1.32
PTCH1-216ENST00000548379 FAM161BQ96MY7 647 aa6.83□□□□□ -1.32
PTCH1-216ENST00000548379 TLR7Q9NYK1 1049 aaKnown RBP6.83□□□□□ -1.32
PTCH1-216ENST00000548379 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.83□□□□□ -1.32
PTCH1-216ENST00000548379 AK5Q9Y6K8 562 aa6.83□□□□□ -1.32
PTCH1-216ENST00000548379 GPR25O00155 361 aa6.82□□□□□ -1.32
PTCH1-216ENST00000548379 GIPC1O14908 333 aa6.82□□□□□ -1.32
PTCH1-216ENST00000548379 SORBS3O60504 671 aa6.82□□□□□ -1.32
PTCH1-216ENST00000548379 NFKB1P19838 968 aa6.82□□□□□ -1.32
PTCH1-216ENST00000548379 IRS1P35568 1242 aa6.82□□□□□ -1.32
PTCH1-216ENST00000548379 PSMD2Q13200 908 aa6.82□□□□□ -1.32
PTCH1-216ENST00000548379 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.82□□□□□ -1.32
PTCH1-216ENST00000548379 PI16Q6UXB8 463 aa6.82□□□□□ -1.32
PTCH1-216ENST00000548379 KRT25Q7Z3Z0 450 aa6.82□□□□□ -1.32
PTCH1-216ENST00000548379 TRERF1Q96PN7 1200 aa6.82□□□□□ -1.32
PTCH1-216ENST00000548379 BACH2Q9BYV9 841 aa6.82□□□□□ -1.32
PTCH1-216ENST00000548379 OSBPL7Q9BZF2 842 aa6.82□□□□□ -1.32
PTCH1-216ENST00000548379 BCL11AQ9H165 835 aa6.82□□□□□ -1.32
PTCH1-216ENST00000548379 H3BM21 787 aa6.81□□□□□ -1.32
PTCH1-216ENST00000548379 C2CD2LO14523 706 aa6.81□□□□□ -1.32
PTCH1-216ENST00000548379 POLR3DP05423 398 aaPredicted RBP6.81□□□□□ -1.32
PTCH1-216ENST00000548379 CES1P23141 567 aa6.81□□□□□ -1.32
PTCH1-216ENST00000548379 ITGAEP38570 1179 aa6.81□□□□□ -1.32
PTCH1-216ENST00000548379 GAS6Q14393 721 aa6.81□□□□□ -1.32
PTCH1-216ENST00000548379 KIAA0319Q5VV43 1072 aa6.81□□□□□ -1.32
PTCH1-216ENST00000548379 PEAR1Q5VY43 1037 aaPredicted RBP6.81□□□□□ -1.32
PTCH1-216ENST00000548379 FOXR1Q6PIV2 292 aa6.81□□□□□ -1.32
PTCH1-216ENST00000548379 MDFIQ99750 246 aa6.81□□□□□ -1.32
PTCH1-216ENST00000548379 NPHS2Q9NP85 383 aa6.81□□□□□ -1.32
PTCH1-216ENST00000548379 NXF1Q9UBU9 619 aaKnown RBP6.81□□□□□ -1.32
PTCH1-216ENST00000548379 SPG7Q9UQ90 795 aa6.81□□□□□ -1.32
PTCH1-216ENST00000548379 CDC14CA4D256 554 aa6.8□□□□□ -1.32
PTCH1-216ENST00000548379 CTSHP09668 335 aa6.8□□□□□ -1.32
PTCH1-216ENST00000548379 VSIG8P0DPA2 414 aa6.8□□□□□ -1.32
PTCH1-216ENST00000548379 TCF3P15923 654 aa6.8□□□□□ -1.32
PTCH1-216ENST00000548379 NRLP54845 237 aa6.8□□□□□ -1.32
PTCH1-216ENST00000548379 COL13A1Q5TAT6 717 aaPredicted RBP6.8□□□□□ -1.32
PTCH1-216ENST00000548379 ZNF468Q5VIY5 522 aaPredicted RBP6.8□□□□□ -1.32
PTCH1-216ENST00000548379 DHX32Q7L7V1 743 aaKnown RBP6.8□□□□□ -1.32
PTCH1-216ENST00000548379 TRPM4Q8TD43 1214 aa6.8□□□□□ -1.32
PTCH1-216ENST00000548379 BHMTQ93088 406 aa6.8□□□□□ -1.32
PTCH1-216ENST00000548379 PNMA5Q96PV4 448 aa6.8□□□□□ -1.32
PTCH1-216ENST00000548379 SUV39H2Q9H5I1 410 aa6.8□□□□□ -1.32
PTCH1-216ENST00000548379 C12orf49Q9H741 205 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms