RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 SPATA31C1P0DKV0 1188 aa7.66□□□□□ -1.18
DEPDC4-205ENST00000548313 IDH3AP50213 366 aa7.66□□□□□ -1.18
DEPDC4-205ENST00000548313 ARSDP51689 593 aa7.66□□□□□ -1.18
DEPDC4-205ENST00000548313 NOM1Q5C9Z4 860 aaKnown RBP7.66□□□□□ -1.18
DEPDC4-205ENST00000548313 MARK1Q9P0L2 795 aa7.66□□□□□ -1.18
DEPDC4-205ENST00000548313 KRTAP9-6A0A140TA67 174 aa7.65□□□□□ -1.18
DEPDC4-205ENST00000548313 DCDC2BA2VCK2 349 aa7.65□□□□□ -1.18
DEPDC4-205ENST00000548313 SPDYE3A6NKU9 549 aa7.65□□□□□ -1.18
DEPDC4-205ENST00000548313 OPLAHO14841 1288 aa7.65□□□□□ -1.18
DEPDC4-205ENST00000548313 KCNH4Q9UQ05 1017 aa7.65□□□□□ -1.18
DEPDC4-205ENST00000548313 ZAP70P43403 619 aa7.64□□□□□ -1.19
DEPDC4-205ENST00000548313 ZNF211Q13398 564 aaPredicted RBP7.64□□□□□ -1.19
DEPDC4-205ENST00000548313 FCHSD1Q86WN1 690 aa7.64□□□□□ -1.19
DEPDC4-205ENST00000548313 GLYCTKQ8IVS8 523 aa7.64□□□□□ -1.19
DEPDC4-205ENST00000548313 PLVAPQ9BX97 442 aa7.64□□□□□ -1.19
DEPDC4-205ENST00000548313 EFCC1Q9HA90 598 aa7.64□□□□□ -1.19
DEPDC4-205ENST00000548313 IVNS1ABPQ9Y6Y0 642 aa7.64□□□□□ -1.19
DEPDC4-205ENST00000548313 SOWAHDA6NJG2 315 aa7.63□□□□□ -1.19
DEPDC4-205ENST00000548313 ZBTB39O15060 712 aa7.63□□□□□ -1.19
DEPDC4-205ENST00000548313 RPLP1P05386 114 aaKnown RBP7.63□□□□□ -1.19
DEPDC4-205ENST00000548313 MPSTP25325 297 aa7.63□□□□□ -1.19
DEPDC4-205ENST00000548313 EIF1AXP47813 144 aaKnown RBP7.63□□□□□ -1.19
DEPDC4-205ENST00000548313 SFSWAPQ12872 951 aaKnown RBP7.63□□□□□ -1.19
DEPDC4-205ENST00000548313 MTMR3Q13615 1198 aa7.63□□□□□ -1.19
DEPDC4-205ENST00000548313 FAM26DQ5JW98 314 aa7.63□□□□□ -1.19
DEPDC4-205ENST00000548313 PIK3R5Q8WYR1 880 aa7.63□□□□□ -1.19
DEPDC4-205ENST00000548313 TRIM11Q96F44 468 aa7.63□□□□□ -1.19
DEPDC4-205ENST00000548313 ANO2Q9NQ90 1003 aa7.63□□□□□ -1.19
DEPDC4-205ENST00000548313 KLF15Q9UIH9 416 aa7.63□□□□□ -1.19
DEPDC4-205ENST00000548313 H3BRB1 525 aa7.62□□□□□ -1.19
DEPDC4-205ENST00000548313 TUT1Q9H6E5 874 aaKnown RBP7.62□□□□□ -1.19
DEPDC4-205ENST00000548313 STRN4Q9NRL3 753 aa7.62□□□□□ -1.19
DEPDC4-205ENST00000548313 PRR12Q9ULL5 1215 aa7.62□□□□□ -1.19
DEPDC4-205ENST00000548313 RTCBQ9Y3I0 505 aaKnown RBP7.62□□□□□ -1.19
DEPDC4-205ENST00000548313 SCO2A0A1W2PP80 73 aa7.61□□□□□ -1.19
DEPDC4-205ENST00000548313 PCSK2P16519 638 aa7.61□□□□□ -1.19
DEPDC4-205ENST00000548313 CD33P20138 364 aa7.61□□□□□ -1.19
DEPDC4-205ENST00000548313 ECM1Q16610 540 aa7.61□□□□□ -1.19
DEPDC4-205ENST00000548313 ZNF468Q5VIY5 522 aaPredicted RBP7.61□□□□□ -1.19
DEPDC4-205ENST00000548313 HCN2Q9UL51 889 aa7.61□□□□□ -1.19
DEPDC4-205ENST00000548313 EGFRP00533 1210 aa7.6□□□□□ -1.19
DEPDC4-205ENST00000548313 ALAS2P22557 587 aa7.6□□□□□ -1.19
DEPDC4-205ENST00000548313 MZF1P28698 734 aaPredicted RBP7.6□□□□□ -1.19
DEPDC4-205ENST00000548313 USP5P45974 858 aa7.6□□□□□ -1.19
DEPDC4-205ENST00000548313 NEUROD1Q13562 356 aa7.6□□□□□ -1.19
DEPDC4-205ENST00000548313 AAMPQ13685 434 aa7.6□□□□□ -1.19
DEPDC4-205ENST00000548313 RSPO4Q2I0M5 234 aaPredicted RBP7.6□□□□□ -1.19
DEPDC4-205ENST00000548313 PRRT3Q5FWE3 981 aa7.6□□□□□ -1.19
DEPDC4-205ENST00000548313 FNDC3AQ9Y2H6 1198 aaKnown RBP7.6□□□□□ -1.19
DEPDC4-205ENST00000548313 ZBTB7CA1YPR0 619 aa7.59□□□□□ -1.19
DEPDC4-205ENST00000548313 APBA3O96018 575 aa7.59□□□□□ -1.19
DEPDC4-205ENST00000548313 PCBP4P57723 403 aaKnown RBP7.59□□□□□ -1.19
DEPDC4-205ENST00000548313 ARHGAP4P98171 946 aa7.59□□□□□ -1.19
DEPDC4-205ENST00000548313 SPEM2Q0P670 501 aa7.59□□□□□ -1.19
DEPDC4-205ENST00000548313 CCINQ13939 588 aa7.59□□□□□ -1.19
DEPDC4-205ENST00000548313 NKAPLQ5M9Q1 402 aa7.59□□□□□ -1.19
DEPDC4-205ENST00000548313 RGL4Q8IZJ4 473 aa7.59□□□□□ -1.19
DEPDC4-205ENST00000548313 CMTR1Q8N1G2 835 aaKnown RBP7.59□□□□□ -1.19
DEPDC4-205ENST00000548313 GPR152Q8TDT2 470 aa7.59□□□□□ -1.19
DEPDC4-205ENST00000548313 GSX2Q9BZM3 304 aa7.59□□□□□ -1.19
DEPDC4-205ENST00000548313 ELOA3CA0A087WX78 387 aaPredicted RBP7.58□□□□□ -1.2
DEPDC4-205ENST00000548313 ELOA3DA6NLF2 546 aaPredicted RBP7.58□□□□□ -1.2
DEPDC4-205ENST00000548313 GRNP28799 593 aaKnown RBP7.58□□□□□ -1.2
DEPDC4-205ENST00000548313 ELOA3BQ3SY89 546 aa7.58□□□□□ -1.2
DEPDC4-205ENST00000548313 ATCAYQ86WG3 371 aa7.58□□□□□ -1.2
DEPDC4-205ENST00000548313 ELOA3Q8NG57 546 aa7.58□□□□□ -1.2
DEPDC4-205ENST00000548313 CITED4Q96RK1 184 aa7.58□□□□□ -1.2
DEPDC4-205ENST00000548313 KCNMB2Q9Y691 235 aa7.58□□□□□ -1.2
DEPDC4-205ENST00000548313 FZD6O60353 706 aa7.57□□□□□ -1.2
DEPDC4-205ENST00000548313 XYLBO75191 536 aa7.57□□□□□ -1.2
DEPDC4-205ENST00000548313 PDGFAP04085 211 aa7.57□□□□□ -1.2
DEPDC4-205ENST00000548313 DNM1Q05193 864 aaKnown RBP7.57□□□□□ -1.2
DEPDC4-205ENST00000548313 TTC16Q8NEE8 873 aa7.57□□□□□ -1.2
DEPDC4-205ENST00000548313 EDEM1Q92611 657 aa7.57□□□□□ -1.2
DEPDC4-205ENST00000548313 BIN2Q9UBW5 565 aaPredicted RBP7.57□□□□□ -1.2
DEPDC4-205ENST00000548313 UBAP1LF5GYI3 381 aa7.56□□□□□ -1.2
DEPDC4-205ENST00000548313 NDUFB5O43674 189 aa7.56□□□□□ -1.2
DEPDC4-205ENST00000548313 EHHADHQ08426 723 aa7.56□□□□□ -1.2
DEPDC4-205ENST00000548313 ARTNQ5T4W7 220 aa7.56□□□□□ -1.2
DEPDC4-205ENST00000548313 NUDT16Q96DE0 195 aaKnown RBP7.56□□□□□ -1.2
DEPDC4-205ENST00000548313 PNMA5Q96PV4 448 aa7.56□□□□□ -1.2
DEPDC4-205ENST00000548313 NACC1Q96RE7 527 aa7.56□□□□□ -1.2
DEPDC4-205ENST00000548313 SLC30A3Q99726 388 aa7.56□□□□□ -1.2
DEPDC4-205ENST00000548313 ZFP64Q9NPA5 681 aa7.56□□□□□ -1.2
DEPDC4-205ENST00000548313 TPSG1Q9NRR2 321 aa7.56□□□□□ -1.2
DEPDC4-205ENST00000548313 BRPF3Q9ULD4 1205 aa7.56□□□□□ -1.2
DEPDC4-205ENST00000548313 USP20Q9Y2K6 914 aa7.56□□□□□ -1.2
DEPDC4-205ENST00000548313 SIN3BO75182 1162 aa7.55□□□□□ -1.2
DEPDC4-205ENST00000548313 MAP3K6O95382 1288 aa7.55□□□□□ -1.2
DEPDC4-205ENST00000548313 PDE12Q6L8Q7 609 aaKnown RBP7.55□□□□□ -1.2
DEPDC4-205ENST00000548313 XKR5Q6UX68 686 aa7.55□□□□□ -1.2
DEPDC4-205ENST00000548313 SND1Q7KZF4 910 aaKnown RBP eCLIP7.55□□□□□ -1.2
DEPDC4-205ENST00000548313 KRTAP1-3Q8IUG1 177 aa7.55□□□□□ -1.2
DEPDC4-205ENST00000548313 POLIQ9UNA4 740 aa7.55□□□□□ -1.2
DEPDC4-205ENST00000548313 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.55□□□□□ -1.2
DEPDC4-205ENST00000548313 DYRK3O43781 588 aa7.54□□□□□ -1.2
DEPDC4-205ENST00000548313 PDE3BQ13370 1112 aa7.54□□□□□ -1.2
DEPDC4-205ENST00000548313 FOXD4L6Q3SYB3 417 aaPredicted RBP7.54□□□□□ -1.2
DEPDC4-205ENST00000548313 FOXD4L3Q6VB84 417 aaPredicted RBP7.54□□□□□ -1.2
DEPDC4-205ENST00000548313 SYT9Q86SS6 491 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms