RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 KIF6Q6ZMV9 814 aa9.56□□□□□ -0.88
CPSF7-224ENST00000544990 ZNF454Q8N9F8 522 aa9.56□□□□□ -0.88
CPSF7-224ENST00000544990 KDM4CQ9H3R0 1056 aa9.56□□□□□ -0.88
CPSF7-224ENST00000544990 GPBP1L1Q9HC44 474 aaPredicted RBP9.56□□□□□ -0.88
CPSF7-224ENST00000544990 PIM2Q9P1W9 311 aa9.56□□□□□ -0.88
CPSF7-224ENST00000544990 NRXN2Q9P2S2 1712 aa9.56□□□□□ -0.88
CPSF7-224ENST00000544990 ERVV-1B6SEH8 477 aa9.55□□□□□ -0.88
CPSF7-224ENST00000544990 HOXB7P09629 217 aa9.55□□□□□ -0.88
CPSF7-224ENST00000544990 NUDT7P0C024 238 aa9.55□□□□□ -0.88
CPSF7-224ENST00000544990 ZNF853P0CG23 659 aa9.55□□□□□ -0.88
CPSF7-224ENST00000544990 FAM9BQ8IZU0 186 aa9.55□□□□□ -0.88
CPSF7-224ENST00000544990 ZDHHC16Q969W1 377 aa9.55□□□□□ -0.88
CPSF7-224ENST00000544990 CHMP4AQ9BY43 222 aa9.55□□□□□ -0.88
CPSF7-224ENST00000544990 MBIPQ9NS73 344 aa9.55□□□□□ -0.88
CPSF7-224ENST00000544990 WWC3Q9ULE0 1092 aa9.55□□□□□ -0.88
CPSF7-224ENST00000544990 PDZRN3Q9UPQ7 1066 aa9.55□□□□□ -0.88
CPSF7-224ENST00000544990 BCS1LQ9Y276 419 aa9.55□□□□□ -0.88
CPSF7-224ENST00000544990 MAP3K15Q6ZN16 1313 aa9.55□□□□□ -0.88
CPSF7-224ENST00000544990 NUP98P52948 1817 aa9.54□□□□□ -0.88
CPSF7-224ENST00000544990 KIAA1551Q9HCM1 1747 aa9.54□□□□□ -0.88
CPSF7-224ENST00000544990 H0YIN7 160 aa9.54□□□□□ -0.88
CPSF7-224ENST00000544990 POTEJP0CG39 1038 aa9.54□□□□□ -0.88
CPSF7-224ENST00000544990 PDE6BP35913 854 aa9.54□□□□□ -0.88
CPSF7-224ENST00000544990 FOSBP53539 338 aa9.54□□□□□ -0.88
CPSF7-224ENST00000544990 ST5P78524 1137 aa9.54□□□□□ -0.88
CPSF7-224ENST00000544990 TPTE2Q6XPS3 522 aa9.54□□□□□ -0.88
CPSF7-224ENST00000544990 WWC1Q8IX03 1113 aa9.54□□□□□ -0.88
CPSF7-224ENST00000544990 CNBD1Q8NA66 436 aa9.54□□□□□ -0.88
CPSF7-224ENST00000544990 NECTIN2Q92692 538 aa9.54□□□□□ -0.88
CPSF7-224ENST00000544990 BRIP1Q9BX63 1249 aa9.54□□□□□ -0.88
CPSF7-224ENST00000544990 NIP7Q9Y221 180 aaKnown RBP eCLIP9.54□□□□□ -0.88
CPSF7-224ENST00000544990 BRCA1P38398 1863 aaKnown RBP9.53□□□□□ -0.88
CPSF7-224ENST00000544990 POTEB2H3BUK9 544 aa9.53□□□□□ -0.88
CPSF7-224ENST00000544990 HOXB3P14651 431 aaPredicted RBP9.53□□□□□ -0.88
CPSF7-224ENST00000544990 KCNA3P22001 575 aa9.53□□□□□ -0.88
CPSF7-224ENST00000544990 FECHP22830 423 aa9.53□□□□□ -0.88
CPSF7-224ENST00000544990 GTF2E1P29083 439 aaPredicted RBP9.53□□□□□ -0.88
CPSF7-224ENST00000544990 CHRNA5P30532 468 aa9.53□□□□□ -0.88
CPSF7-224ENST00000544990 HLFQ16534 295 aa9.53□□□□□ -0.88
CPSF7-224ENST00000544990 KRT24Q2M2I5 525 aa9.53□□□□□ -0.88
CPSF7-224ENST00000544990 DALRD3Q5D0E6 543 aaKnown RBP9.53□□□□□ -0.88
CPSF7-224ENST00000544990 HDGFL1Q5TGJ6 251 aa9.53□□□□□ -0.88
CPSF7-224ENST00000544990 DUSP27Q5VZP5 1158 aa9.53□□□□□ -0.88
CPSF7-224ENST00000544990 PRR5LQ6MZQ0 368 aa9.53□□□□□ -0.88
CPSF7-224ENST00000544990 TTLL7Q6ZT98 887 aa9.53□□□□□ -0.88
CPSF7-224ENST00000544990 NBPF5PQ86XG9 351 aaPredicted RBP9.53□□□□□ -0.88
CPSF7-224ENST00000544990 IL27Q8NEV9 243 aa9.53□□□□□ -0.88
CPSF7-224ENST00000544990 DDX21Q9NR30 783 aaKnown RBP eCLIP9.53□□□□□ -0.88
CPSF7-224ENST00000544990 ARFGEF1Q9Y6D6 1849 aa9.52□□□□□ -0.89
CPSF7-224ENST00000544990 TTLL12Q14166 644 aaPredicted RBP9.52□□□□□ -0.89
CPSF7-224ENST00000544990 AMHR2Q16671 573 aa9.52□□□□□ -0.89
CPSF7-224ENST00000544990 GIGYF2Q6Y7W6 1299 aaKnown RBP9.52□□□□□ -0.89
CPSF7-224ENST00000544990 C2CD5Q86YS7 1000 aa9.52□□□□□ -0.89
CPSF7-224ENST00000544990 NYXQ9GZU5 481 aa9.52□□□□□ -0.89
CPSF7-224ENST00000544990 ZBTB3Q9H5J0 574 aa9.52□□□□□ -0.89
CPSF7-224ENST00000544990 CDHR5Q9HBB8 845 aa9.52□□□□□ -0.89
CPSF7-224ENST00000544990 DBF4Q9UBU7 674 aaPredicted RBP9.52□□□□□ -0.89
CPSF7-224ENST00000544990 SALL2Q9Y467 1007 aaPredicted RBP9.52□□□□□ -0.89
CPSF7-224ENST00000544990 IL16Q14005 1332 aa9.52□□□□□ -0.89
CPSF7-224ENST00000544990 DLEC1Q9Y238 1755 aa9.51□□□□□ -0.89
CPSF7-224ENST00000544990 SENP3-EIF4A1A0A087X0R7 540 aa9.51□□□□□ -0.89
CPSF7-224ENST00000544990 FAM177BA6PVY3 158 aa9.51□□□□□ -0.89
CPSF7-224ENST00000544990 ELL2O00472 640 aaPredicted RBP9.51□□□□□ -0.89
CPSF7-224ENST00000544990 ANXA1P04083 346 aa9.51□□□□□ -0.89
CPSF7-224ENST00000544990 AIMP1Q12904 312 aaKnown RBP9.51□□□□□ -0.89
CPSF7-224ENST00000544990 TSR1Q2NL82 804 aaKnown RBP9.51□□□□□ -0.89
CPSF7-224ENST00000544990 HSP90AB3PQ58FF7 597 aa9.51□□□□□ -0.89
CPSF7-224ENST00000544990 C6orf132Q5T0Z8 1188 aa9.51□□□□□ -0.89
CPSF7-224ENST00000544990 ARHGAP27Q6ZUM4 889 aa9.51□□□□□ -0.89
CPSF7-224ENST00000544990 COPS6Q7L5N1 327 aa9.51□□□□□ -0.89
CPSF7-224ENST00000544990 WDR63Q8IWG1 891 aa9.51□□□□□ -0.89
CPSF7-224ENST00000544990 TTLL6Q8N841 843 aa9.51□□□□□ -0.89
CPSF7-224ENST00000544990 ZNF622Q969S3 477 aaKnown RBP eCLIP9.51□□□□□ -0.892e-6■□□□□ 9.3
CPSF7-224ENST00000544990 HYPKQ9NX55 129 aa9.51□□□□□ -0.89
CPSF7-224ENST00000544990 CHPF2Q9P2E5 772 aa9.51□□□□□ -0.89
CPSF7-224ENST00000544990 ANKRD31Q8N7Z5 1873 aa9.51□□□□□ -0.89
CPSF7-224ENST00000544990 ATP10DQ9P241 1426 aa9.5□□□□□ -0.89
CPSF7-224ENST00000544990 PROSER3Q2NL68 480 aa9.5□□□□□ -0.89
CPSF7-224ENST00000544990 PARP10Q53GL7 1025 aa9.5□□□□□ -0.89
CPSF7-224ENST00000544990 PPP4R3BQ5MIZ7 849 aa9.5□□□□□ -0.89
CPSF7-224ENST00000544990 CCDC30Q5VVM6 783 aa9.5□□□□□ -0.89
CPSF7-224ENST00000544990 GPR153Q6NV75 609 aa9.5□□□□□ -0.89
CPSF7-224ENST00000544990 LRP10Q7Z4F1 713 aa9.5□□□□□ -0.89
CPSF7-224ENST00000544990 PPP1R42Q7Z4L9 355 aa9.5□□□□□ -0.89
CPSF7-224ENST00000544990 CCDC24Q8N4L8 307 aa9.5□□□□□ -0.89
CPSF7-224ENST00000544990 XAGE3Q8WTP9 111 aa9.5□□□□□ -0.89
CPSF7-224ENST00000544990 KHSRPQ92945 711 aaKnown RBP eCLIP9.5□□□□□ -0.89
CPSF7-224ENST00000544990 NPDC1Q9NQX5 325 aaPredicted RBP9.5□□□□□ -0.89
CPSF7-224ENST00000544990 CCER2I3L3R5 266 aa9.49□□□□□ -0.89
CPSF7-224ENST00000544990 GPTP24298 496 aa9.49□□□□□ -0.89
CPSF7-224ENST00000544990 ANKRD13DQ6ZTN6 518 aa9.49□□□□□ -0.89
CPSF7-224ENST00000544990 ZNF34Q8IZ26 560 aa9.49□□□□□ -0.89
CPSF7-224ENST00000544990 C8orf58Q8NAV2 365 aa9.49□□□□□ -0.89
CPSF7-224ENST00000544990 CNKSR1Q969H4 720 aa9.49□□□□□ -0.89
CPSF7-224ENST00000544990 MASTLQ96GX5 879 aa9.49□□□□□ -0.89
CPSF7-224ENST00000544990 DDRGK1Q96HY6 314 aa9.49□□□□□ -0.89
CPSF7-224ENST00000544990 ANKRD36CQ5JPF3 1778 aa9.48□□□□□ -0.89
CPSF7-224ENST00000544990 OATP04181 439 aa9.48□□□□□ -0.89
CPSF7-224ENST00000544990 SRGNP10124 158 aa9.48□□□□□ -0.89
CPSF7-224ENST00000544990 SUSD4Q5VX71 490 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms