RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 SCAMP3O14828 347 aaKnown RBP5.95□□□□□ -1.46
SCFD1-207ENST00000544052 XYLBO75191 536 aa5.95□□□□□ -1.46
SCFD1-207ENST00000544052 CTSHP09668 335 aa5.95□□□□□ -1.46
SCFD1-207ENST00000544052 PDE12Q6L8Q7 609 aaKnown RBP5.95□□□□□ -1.46
SCFD1-207ENST00000544052 XKR5Q6UX68 686 aa5.95□□□□□ -1.46
SCFD1-207ENST00000544052 DNAJC25Q9H1X3 360 aa5.95□□□□□ -1.46
SCFD1-207ENST00000544052 CRISPLD1Q9H336 500 aa5.95□□□□□ -1.46
SCFD1-207ENST00000544052 BRD7Q9NPI1 651 aa5.95□□□□□ -1.46
SCFD1-207ENST00000544052 FNDC3AQ9Y2H6 1198 aaKnown RBP5.95□□□□□ -1.46
SCFD1-207ENST00000544052 DYRK1BQ9Y463 629 aa5.95□□□□□ -1.46
SCFD1-207ENST00000544052 F11P03951 625 aa5.94□□□□□ -1.46
SCFD1-207ENST00000544052 POLR3DP05423 398 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-207ENST00000544052 FBF1Q8TES7 1133 aa5.94□□□□□ -1.46
SCFD1-207ENST00000544052 CCDC74AQ96AQ1 378 aa5.94□□□□□ -1.46
SCFD1-207ENST00000544052 ERCC5P28715 1186 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-207ENST00000544052 SNX29Q8TEQ0 813 aa5.94□□□□□ -1.46
SCFD1-207ENST00000544052 OSBPL7Q9BZF2 842 aa5.94□□□□□ -1.46
SCFD1-207ENST00000544052 ZFYVE28Q9HCC9 887 aa5.94□□□□□ -1.46
SCFD1-207ENST00000544052 CNTN3Q9P232 1028 aa5.94□□□□□ -1.46
SCFD1-207ENST00000544052 AK5Q9Y6K8 562 aa5.94□□□□□ -1.46
SCFD1-207ENST00000544052 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-207ENST00000544052 NEFLP07196 543 aa5.93□□□□□ -1.46
SCFD1-207ENST00000544052 THBS1P07996 1170 aa5.93□□□□□ -1.46
SCFD1-207ENST00000544052 FANCCQ00597 558 aa5.93□□□□□ -1.46
SCFD1-207ENST00000544052 METTL16Q86W50 562 aaKnown RBP5.93□□□□□ -1.46
SCFD1-207ENST00000544052 PGBD3Q8N328 593 aa5.93□□□□□ -1.46
SCFD1-207ENST00000544052 C1orf127Q8N9H9 656 aa5.93□□□□□ -1.46
SCFD1-207ENST00000544052 CHRDQ9H2X0 955 aa5.93□□□□□ -1.46
SCFD1-207ENST00000544052 NPHS2Q9NP85 383 aa5.93□□□□□ -1.46
SCFD1-207ENST00000544052 EREGO14944 169 aa5.92□□□□□ -1.46
SCFD1-207ENST00000544052 PHACTR2O75167 634 aa5.92□□□□□ -1.46
SCFD1-207ENST00000544052 EPB42P16452 691 aa5.92□□□□□ -1.46
SCFD1-207ENST00000544052 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.92□□□□□ -1.463e-6■□□□□ 9.1
SCFD1-207ENST00000544052 NT5DC4Q86YG4 428 aa5.92□□□□□ -1.46
SCFD1-207ENST00000544052 RAD51AP2Q09MP3 1159 aa5.92□□□□□ -1.46
SCFD1-207ENST00000544052 SFSWAPQ12872 951 aaKnown RBP5.92□□□□□ -1.46
SCFD1-207ENST00000544052 GRIN2CQ14957 1233 aa5.92□□□□□ -1.46
SCFD1-207ENST00000544052 RIPOR1Q6ZS17 1223 aa5.92□□□□□ -1.46
SCFD1-207ENST00000544052 KRT25Q7Z3Z0 450 aa5.92□□□□□ -1.46
SCFD1-207ENST00000544052 ABI2Q9NYB9 513 aaPredicted RBP5.92□□□□□ -1.46
SCFD1-207ENST00000544052 HCN2Q9UL51 889 aa5.92□□□□□ -1.46
SCFD1-207ENST00000544052 SPG7Q9UQ90 795 aa5.92□□□□□ -1.46
SCFD1-207ENST00000544052 DCDC2BA2VCK2 349 aa5.91□□□□□ -1.46
SCFD1-207ENST00000544052 SASH3O75995 380 aa5.91□□□□□ -1.46
SCFD1-207ENST00000544052 CYP2E1P05181 493 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-207ENST00000544052 TARSP26639 723 aaKnown RBP5.91□□□□□ -1.46
SCFD1-207ENST00000544052 ZC3H6P61129 1189 aaKnown RBP5.91□□□□□ -1.46
SCFD1-207ENST00000544052 NLRP8Q86W28 1048 aa5.91□□□□□ -1.46
SCFD1-207ENST00000544052 NLRP2Q9NX02 1062 aa5.91□□□□□ -1.46
SCFD1-207ENST00000544052 EGFRP00533 1210 aa5.9□□□□□ -1.46
SCFD1-207ENST00000544052 EFHC2Q5JST6 749 aa5.9□□□□□ -1.46
SCFD1-207ENST00000544052 NLRP13Q86W25 1043 aa5.9□□□□□ -1.46
SCFD1-207ENST00000544052 EIF4BP23588 611 aaKnown RBP5.9□□□□□ -1.47
SCFD1-207ENST00000544052 ZNF76P36508 570 aa5.9□□□□□ -1.47
SCFD1-207ENST00000544052 PTSQ03393 145 aa5.9□□□□□ -1.47
SCFD1-207ENST00000544052 NAALADL2Q58DX5 795 aa5.9□□□□□ -1.47
SCFD1-207ENST00000544052 SAMD5Q5TGI4 173 aa5.9□□□□□ -1.47
SCFD1-207ENST00000544052 MEI1Q5TIA1 1274 aa5.9□□□□□ -1.47
SCFD1-207ENST00000544052 NXPE4Q6UWF7 544 aa5.9□□□□□ -1.47
SCFD1-207ENST00000544052 RNF34Q969K3 372 aa5.9□□□□□ -1.47
SCFD1-207ENST00000544052 CRELD1Q96HD1 420 aa5.9□□□□□ -1.47
SCFD1-207ENST00000544052 STRN4Q9NRL3 753 aa5.9□□□□□ -1.47
SCFD1-207ENST00000544052 KANSL3Q9P2N6 904 aa5.9□□□□□ -1.47
SCFD1-207ENST00000544052 UBAP2LQ14157 1087 aaKnown RBP5.89□□□□□ -1.47
SCFD1-207ENST00000544052 C12orf49Q9H741 205 aa5.89□□□□□ -1.47
SCFD1-207ENST00000544052 LATS2Q9NRM7 1088 aa5.89□□□□□ -1.47
SCFD1-207ENST00000544052 KHNYNO15037 678 aaKnown RBP5.89□□□□□ -1.47
SCFD1-207ENST00000544052 ATXN7O15265 892 aaPredicted RBP5.89□□□□□ -1.47
SCFD1-207ENST00000544052 EFSO43281 561 aa5.89□□□□□ -1.47
SCFD1-207ENST00000544052 CES1P23141 567 aa5.89□□□□□ -1.47
SCFD1-207ENST00000544052 C8orf37Q96NL8 207 aa5.89□□□□□ -1.47
SCFD1-207ENST00000544052 BCO2Q9BYV7 579 aa5.89□□□□□ -1.47
SCFD1-207ENST00000544052 GSX2Q9BZM3 304 aa5.89□□□□□ -1.47
SCFD1-207ENST00000544052 CUEDC1Q9NWM3 386 aaPredicted RBP5.89□□□□□ -1.47
SCFD1-207ENST00000544052 ZFATQ9P243 1243 aa5.89□□□□□ -1.47
SCFD1-207ENST00000544052 KCNH4Q9UQ05 1017 aa5.89□□□□□ -1.47
SCFD1-207ENST00000544052 MMP20O60882 483 aa5.88□□□□□ -1.47
SCFD1-207ENST00000544052 ITGAEP38570 1179 aa5.88□□□□□ -1.47
SCFD1-207ENST00000544052 KCNQ4P56696 695 aa5.88□□□□□ -1.47
SCFD1-207ENST00000544052 DBN1Q16643 649 aa5.88□□□□□ -1.47
SCFD1-207ENST00000544052 TTC39BQ5VTQ0 682 aaPredicted RBP5.88□□□□□ -1.47
SCFD1-207ENST00000544052 FRMD6Q96NE9 622 aa5.88□□□□□ -1.47
SCFD1-207ENST00000544052 METTL5Q9NRN9 209 aaKnown RBP5.88□□□□□ -1.47
SCFD1-207ENST00000544052 SLC35F4A4IF30 521 aa5.87□□□□□ -1.47
SCFD1-207ENST00000544052 GADD45BO75293 160 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-207ENST00000544052 MAPTP10636 758 aaKnown RBP5.87□□□□□ -1.47
SCFD1-207ENST00000544052 TNP2Q05952 138 aa5.87□□□□□ -1.47
SCFD1-207ENST00000544052 CCINQ13939 588 aa5.87□□□□□ -1.47
SCFD1-207ENST00000544052 ZNF394Q53GI3 561 aa5.87□□□□□ -1.47
SCFD1-207ENST00000544052 RAB44Q7Z6P3 723 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-207ENST00000544052 GALNT12Q8IXK2 581 aa5.87□□□□□ -1.47
SCFD1-207ENST00000544052 NUCKS1Q9H1E3 243 aaKnown RBP5.87□□□□□ -1.47
SCFD1-207ENST00000544052 PCDHGC4Q9Y5F7 938 aa5.87□□□□□ -1.47
SCFD1-207ENST00000544052 PCDHGB7Q9Y5F8 929 aa5.87□□□□□ -1.47
SCFD1-207ENST00000544052 BNIP3LO60238 219 aa5.87□□□□□ -1.47
SCFD1-207ENST00000544052 USP17L7P0C7H9 530 aa5.87□□□□□ -1.47
SCFD1-207ENST00000544052 FAM157BP0CG42 384 aa5.87□□□□□ -1.47
SCFD1-207ENST00000544052 GRM2Q14416 872 aa5.87□□□□□ -1.47
SCFD1-207ENST00000544052 PEAR1Q5VY43 1037 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-207ENST00000544052 ACBD3Q9H3P7 528 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms