RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 ANKIB1Q9P2G1 1089 aa9.61□□□□□ -0.87
TRIM59-208ENST00000543469 NOP58Q9Y2X3 529 aaKnown RBP9.61□□□□□ -0.87
TRIM59-208ENST00000543469 COL18A1P39060 1754 aa9.61□□□□□ -0.87
TRIM59-208ENST00000543469 H0YIN7 160 aa9.61□□□□□ -0.87
TRIM59-208ENST00000543469 PUM3Q15397 648 aaKnown RBP9.61□□□□□ -0.87
TRIM59-208ENST00000543469 TTLL7Q6ZT98 887 aa9.61□□□□□ -0.87
TRIM59-208ENST00000543469 NLRP10Q86W26 655 aa9.61□□□□□ -0.87
TRIM59-208ENST00000543469 TRIM34Q9BYJ4 488 aa9.61□□□□□ -0.87
TRIM59-208ENST00000543469 ZNF287Q9HBT7 754 aa9.61□□□□□ -0.87
TRIM59-208ENST00000543469 CACNA1FO60840 1977 aa9.61□□□□□ -0.87
TRIM59-208ENST00000543469 KAT6BQ8WYB5 2073 aa9.61□□□□□ -0.87
TRIM59-208ENST00000543469 CPLX2Q6PUV4 134 aaKnown RBP9.6□□□□□ -0.87
TRIM59-208ENST00000543469 PCDHB15Q9Y5E8 787 aa9.6□□□□□ -0.87
TRIM59-208ENST00000543469 ABCA3Q99758 1704 aa9.6□□□□□ -0.87
TRIM59-208ENST00000543469 SEMA3EO15041 775 aa9.6□□□□□ -0.87
TRIM59-208ENST00000543469 SUCLG2Q96I99 432 aa9.6□□□□□ -0.87
TRIM59-208ENST00000543469 BCL9LQ86UU0 1499 aa9.6□□□□□ -0.87
TRIM59-208ENST00000543469 UTYO14607 1347 aa9.6□□□□□ -0.87
TRIM59-208ENST00000543469 PPP4R3BQ5MIZ7 849 aa9.6□□□□□ -0.87
TRIM59-208ENST00000543469 TTC22Q5TAA0 569 aa9.6□□□□□ -0.87
TRIM59-208ENST00000543469 MAST3O60307 1309 aa9.6□□□□□ -0.87
TRIM59-208ENST00000543469 SYNE3Q6ZMZ3 975 aa9.6□□□□□ -0.87
TRIM59-208ENST00000543469 BBOX1O75936 387 aa9.59□□□□□ -0.87
TRIM59-208ENST00000543469 NCLP19338 710 aaKnown RBP9.59□□□□□ -0.87
TRIM59-208ENST00000543469 DENND2AQ9ULE3 1009 aa9.59□□□□□ -0.87
TRIM59-208ENST00000543469 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.59□□□□□ -0.87
TRIM59-208ENST00000543469 ITGA6P23229 1130 aa9.59□□□□□ -0.87
TRIM59-208ENST00000543469 DNAJC2Q99543 621 aaKnown RBP9.59□□□□□ -0.87
TRIM59-208ENST00000543469 ATP2B4P23634 1241 aa9.59□□□□□ -0.87
TRIM59-208ENST00000543469 RABEP1Q15276 862 aa9.59□□□□□ -0.87
TRIM59-208ENST00000543469 ANKRD1Q15327 319 aa9.59□□□□□ -0.87
TRIM59-208ENST00000543469 USPL1Q5W0Q7 1092 aa9.59□□□□□ -0.87
TRIM59-208ENST00000543469 LPIN2Q92539 896 aa9.59□□□□□ -0.87
TRIM59-208ENST00000543469 KDM2BQ8NHM5 1336 aa9.58□□□□□ -0.88
TRIM59-208ENST00000543469 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.58□□□□□ -0.88
TRIM59-208ENST00000543469 SART3Q15020 963 aaKnown RBP9.58□□□□□ -0.88
TRIM59-208ENST00000543469 TMOD2Q9NZR1 351 aa9.58□□□□□ -0.88
TRIM59-208ENST00000543469 ADCY9O60503 1353 aa9.58□□□□□ -0.88
TRIM59-208ENST00000543469 ABCC12Q96J65 1359 aa9.58□□□□□ -0.88
TRIM59-208ENST00000543469 MARF1Q9Y4F3 1742 aaKnown RBP9.58□□□□□ -0.88
TRIM59-208ENST00000543469 PLCG2P16885 1265 aa9.58□□□□□ -0.88
TRIM59-208ENST00000543469 POLA2Q14181 598 aa9.58□□□□□ -0.88
TRIM59-208ENST00000543469 PROSER3Q2NL68 480 aa9.58□□□□□ -0.88
TRIM59-208ENST00000543469 ANO2Q9NQ90 1003 aa9.58□□□□□ -0.88
TRIM59-208ENST00000543469 LEMD3Q9Y2U8 911 aa9.58□□□□□ -0.88
TRIM59-208ENST00000543469 ERICH2A1L162 156 aa9.58□□□□□ -0.88
TRIM59-208ENST00000543469 GNAT2P19087 354 aa9.58□□□□□ -0.88
TRIM59-208ENST00000543469 NT5C2P49902 561 aa9.57□□□□□ -0.88
TRIM59-208ENST00000543469 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.57□□□□□ -0.88
TRIM59-208ENST00000543469 PPP1R1BQ9UD71 204 aaPredicted RBP9.57□□□□□ -0.88
TRIM59-208ENST00000543469 U3KPZ7 1027 aaPredicted RBP9.57□□□□□ -0.88
TRIM59-208ENST00000543469 BAG3O95817 575 aa9.57□□□□□ -0.88
TRIM59-208ENST00000543469 PDE1AP54750 535 aa9.57□□□□□ -0.88
TRIM59-208ENST00000543469 UBE4AQ14139 1066 aa9.57□□□□□ -0.88
TRIM59-208ENST00000543469 RALYLQ86SE5 291 aaKnown RBP9.57□□□□□ -0.88
TRIM59-208ENST00000543469 ZNF34Q8IZ26 560 aa9.57□□□□□ -0.88
TRIM59-208ENST00000543469 FAM89AQ96GI7 184 aa9.57□□□□□ -0.88
TRIM59-208ENST00000543469 IL1RAPL2Q9NP60 686 aa9.57□□□□□ -0.88
TRIM59-208ENST00000543469 HMGB1P09429 215 aaKnown RBP9.57□□□□□ -0.88
TRIM59-208ENST00000543469 TBC1D22AQ8WUA7 517 aa9.57□□□□□ -0.88
TRIM59-208ENST00000543469 HMG20BQ9P0W2 317 aa9.57□□□□□ -0.88
TRIM59-208ENST00000543469 LRP2BPQ9P2M1 347 aa9.57□□□□□ -0.88
TRIM59-208ENST00000543469 SCN11AQ9UI33 1791 aa9.57□□□□□ -0.88
TRIM59-208ENST00000543469 SERPINB2P05120 415 aa9.57□□□□□ -0.88
TRIM59-208ENST00000543469 NPR1P16066 1061 aa9.57□□□□□ -0.88
TRIM59-208ENST00000543469 RPS8P62241 208 aaKnown RBP9.57□□□□□ -0.88
TRIM59-208ENST00000543469 CCDC178Q5BJE1 867 aa9.57□□□□□ -0.88
TRIM59-208ENST00000543469 ZNF622Q969S3 477 aaKnown RBP eCLIP9.57□□□□□ -0.886e-12■□□□□ 9.4
TRIM59-208ENST00000543469 DLG5Q8TDM6 1919 aa9.56□□□□□ -0.88
TRIM59-208ENST00000543469 C22orf23Q9BZE7 217 aa9.56□□□□□ -0.88
TRIM59-208ENST00000543469 GGA1Q9UJY5 639 aa9.56□□□□□ -0.88
TRIM59-208ENST00000543469 NBPF7P0C2Y1 421 aaPredicted RBP9.56□□□□□ -0.88
TRIM59-208ENST00000543469 CSPP1Q1MSJ5 1256 aa9.56□□□□□ -0.88
TRIM59-208ENST00000543469 TNNI3KQ59H18 835 aa9.56□□□□□ -0.88
TRIM59-208ENST00000543469 HDAC9Q9UKV0 1011 aa9.56□□□□□ -0.88
TRIM59-208ENST00000543469 FPGT-TNNI3KV9GXZ4 949 aa9.56□□□□□ -0.88
TRIM59-208ENST00000543469 NBPF26B4DH59 902 aa9.56□□□□□ -0.88
TRIM59-208ENST00000543469 IGHDP01880 384 aa9.56□□□□□ -0.88
TRIM59-208ENST00000543469 NBPF10Q6P3W6 841 aaKnown RBP9.56□□□□□ -0.88
TRIM59-208ENST00000543469 NBPF15Q8N660 670 aa9.56□□□□□ -0.88
TRIM59-208ENST00000543469 CAMTA2O94983 1202 aa9.55□□□□□ -0.88
TRIM59-208ENST00000543469 APPP05067 770 aa9.55□□□□□ -0.88
TRIM59-208ENST00000543469 PIP4K2AP48426 406 aaPredicted RBP9.55□□□□□ -0.88
TRIM59-208ENST00000543469 RABL6Q3YEC7 729 aaPredicted RBP9.55□□□□□ -0.88
TRIM59-208ENST00000543469 WDR66Q8TBY9 1149 aa9.55□□□□□ -0.88
TRIM59-208ENST00000543469 RNF41Q9H4P4 317 aaPredicted RBP9.55□□□□□ -0.88
TRIM59-208ENST00000543469 RAI14Q9P0K7 980 aa9.55□□□□□ -0.88
TRIM59-208ENST00000543469 CRYBG1Q9Y4K1 1723 aa9.55□□□□□ -0.88
TRIM59-208ENST00000543469 RFX7Q2KHR2 1363 aa9.55□□□□□ -0.88
TRIM59-208ENST00000543469 C6orf229H3BNL8 230 aa9.55□□□□□ -0.88
TRIM59-208ENST00000543469 NUTM1Q86Y26 1132 aa9.55□□□□□ -0.88
TRIM59-208ENST00000543469 KLHL34Q8N239 644 aa9.55□□□□□ -0.88
TRIM59-208ENST00000543469 FBXW7Q969H0 707 aa9.55□□□□□ -0.88
TRIM59-208ENST00000543469 ZC3H12CQ9C0D7 883 aaKnown RBP9.55□□□□□ -0.88
TRIM59-208ENST00000543469 USP42Q9H9J4 1324 aaKnown RBP9.55□□□□□ -0.88
TRIM59-208ENST00000543469 KCNQ2O43526 872 aa9.55□□□□□ -0.88
TRIM59-208ENST00000543469 FKBP4Q02790 459 aaKnown RBP eCLIP9.55□□□□□ -0.88
TRIM59-208ENST00000543469 PDIA6Q15084 440 aa9.55□□□□□ -0.88
TRIM59-208ENST00000543469 DZIP1Q86YF9 867 aaKnown RBP9.55□□□□□ -0.88
TRIM59-208ENST00000543469 LINC00116Q8NCU8 138 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms