RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 SNRKQ9NRH2 765 aa9.3□□□□□ -0.92
LRP6-206ENST00000543091 PA2G4Q9UQ80 394 aaKnown RBP9.3□□□□□ -0.92
LRP6-206ENST00000543091 RLBP1P12271 317 aa9.3□□□□□ -0.92
LRP6-206ENST00000543091 EIF6P56537 245 aaKnown RBP9.3□□□□□ -0.92
LRP6-206ENST00000543091 PUM3Q15397 648 aaKnown RBP9.3□□□□□ -0.92
LRP6-206ENST00000543091 CCAR1Q8IX12 1150 aaKnown RBP9.3□□□□□ -0.92
LRP6-206ENST00000543091 SUCLG2Q96I99 432 aa9.3□□□□□ -0.92
LRP6-206ENST00000543091 ATF5Q9Y2D1 282 aaPredicted RBP9.3□□□□□ -0.92
LRP6-206ENST00000543091 COL15A1P39059 1388 aa9.3□□□□□ -0.92
LRP6-206ENST00000543091 MROH5Q6ZUA9 1318 aa9.3□□□□□ -0.92
LRP6-206ENST00000543091 H3BQV1 296 aa9.29□□□□□ -0.92
LRP6-206ENST00000543091 KRT32Q14532 448 aa9.29□□□□□ -0.92
LRP6-206ENST00000543091 IFFO2Q5TF58 517 aa9.29□□□□□ -0.92
LRP6-206ENST00000543091 CWC27Q6UX04 472 aaKnown RBP9.29□□□□□ -0.92
LRP6-206ENST00000543091 NAPBQ9H115 298 aa9.29□□□□□ -0.92
LRP6-206ENST00000543091 ZNF521Q96K83 1311 aa9.29□□□□□ -0.92
LRP6-206ENST00000543091 PRAMEF22A3QJZ6 481 aa9.29□□□□□ -0.92
LRP6-206ENST00000543091 RIMBP2O15034 1052 aa9.29□□□□□ -0.92
LRP6-206ENST00000543091 ZBTB7BO15156 539 aaPredicted RBP9.29□□□□□ -0.92
LRP6-206ENST00000543091 ATP2B2Q01814 1243 aa9.29□□□□□ -0.92
LRP6-206ENST00000543091 IMMTQ16891 758 aaKnown RBP9.29□□□□□ -0.92
LRP6-206ENST00000543091 BEND3Q5T5X7 828 aa9.29□□□□□ -0.92
LRP6-206ENST00000543091 SAMD1Q6SPF0 538 aaPredicted RBP9.29□□□□□ -0.92
LRP6-206ENST00000543091 C22orf23Q9BZE7 217 aa9.29□□□□□ -0.92
LRP6-206ENST00000543091 KIF20BQ96Q89 1820 aa9.29□□□□□ -0.92
LRP6-206ENST00000543091 VPS53Q5VIR6 699 aa9.29□□□□□ -0.92
LRP6-206ENST00000543091 SPRYD3Q8NCJ5 442 aa9.29□□□□□ -0.92
LRP6-206ENST00000543091 SRP68Q9UHB9 627 aaKnown RBP9.29□□□□□ -0.92
LRP6-206ENST00000543091 NRXN3Q9Y4C0 1643 aa9.29□□□□□ -0.92
LRP6-206ENST00000543091 PLEKHG2Q9H7P9 1386 aa9.29□□□□□ -0.92
LRP6-206ENST00000543091 NBPF7P0C2Y1 421 aaPredicted RBP9.29□□□□□ -0.92
LRP6-206ENST00000543091 BRPF1P55201 1214 aaPredicted RBP9.29□□□□□ -0.92
LRP6-206ENST00000543091 CC2D2BQ6DHV5 1058 aa9.29□□□□□ -0.92
LRP6-206ENST00000543091 FBXO3Q9UK99 471 aa9.29□□□□□ -0.92
LRP6-206ENST00000543091 DENND2AQ9ULE3 1009 aa9.29□□□□□ -0.92
LRP6-206ENST00000543091 HLA-DOAP06340 250 aa9.28□□□□□ -0.92
LRP6-206ENST00000543091 TTLL12Q14166 644 aaPredicted RBP9.28□□□□□ -0.92
LRP6-206ENST00000543091 NIM1KQ8IY84 436 aa9.28□□□□□ -0.92
LRP6-206ENST00000543091 DCTPP1Q9H773 170 aa9.28□□□□□ -0.92
LRP6-206ENST00000543091 NRKQ7Z2Y5 1582 aa9.28□□□□□ -0.92
LRP6-206ENST00000543091 PLCG2P16885 1265 aa9.28□□□□□ -0.92
LRP6-206ENST00000543091 HIBADHP31937 336 aaKnown RBP9.28□□□□□ -0.92
LRP6-206ENST00000543091 TPRNQ4KMQ1 711 aa9.28□□□□□ -0.92
LRP6-206ENST00000543091 C16orf71Q8IYS4 520 aaPredicted RBP9.28□□□□□ -0.92
LRP6-206ENST00000543091 TRMT2AQ8IZ69 625 aaKnown RBP9.28□□□□□ -0.92
LRP6-206ENST00000543091 U3KPZ7 1027 aaPredicted RBP9.28□□□□□ -0.92
LRP6-206ENST00000543091 ABCC4O15439 1325 aa9.28□□□□□ -0.92
LRP6-206ENST00000543091 RNF123Q5XPI4 1314 aa9.28□□□□□ -0.92
LRP6-206ENST00000543091 NLRP10Q86W26 655 aa9.28□□□□□ -0.92
LRP6-206ENST00000543091 SLC16A10Q8TF71 515 aa9.28□□□□□ -0.92
LRP6-206ENST00000543091 UBAC1Q9BSL1 405 aa9.28□□□□□ -0.92
LRP6-206ENST00000543091 CRNKL1Q9BZJ0 848 aaKnown RBP9.28□□□□□ -0.92
LRP6-206ENST00000543091 SPON1Q9HCB6 807 aa9.28□□□□□ -0.92
LRP6-206ENST00000543091 TNNQ9UQP3 1299 aa9.28□□□□□ -0.92
LRP6-206ENST00000543091 TNS2Q63HR2 1409 aa9.28□□□□□ -0.92
LRP6-206ENST00000543091 PXDNQ92626 1479 aa9.28□□□□□ -0.92
LRP6-206ENST00000543091 BBOX1O75936 387 aa9.28□□□□□ -0.92
LRP6-206ENST00000543091 XBP1P17861 261 aa9.28□□□□□ -0.92
LRP6-206ENST00000543091 TFCP2Q12800 502 aa9.28□□□□□ -0.92
LRP6-206ENST00000543091 ARHGEF1Q92888 912 aaKnown RBP9.28□□□□□ -0.92
LRP6-206ENST00000543091 IQSEC3Q9UPP2 1182 aaPredicted RBP9.28□□□□□ -0.92
LRP6-206ENST00000543091 TTC41PQ6P2S7 1318 aa9.28□□□□□ -0.92
LRP6-206ENST00000543091 ATP2B4P23634 1241 aa9.27□□□□□ -0.92
LRP6-206ENST00000543091 NAA16Q6N069 864 aaPredicted RBP9.27□□□□□ -0.92
LRP6-206ENST00000543091 LPIN2Q92539 896 aa9.27□□□□□ -0.92
LRP6-206ENST00000543091 RNF41Q9H4P4 317 aaPredicted RBP9.27□□□□□ -0.92
LRP6-206ENST00000543091 MKNK2Q9HBH9 465 aa9.27□□□□□ -0.92
LRP6-206ENST00000543091 CLEC11AQ9Y240 323 aa9.27□□□□□ -0.92
LRP6-206ENST00000543091 MAST3O60307 1309 aa9.27□□□□□ -0.92
LRP6-206ENST00000543091 CSPP1Q1MSJ5 1256 aa9.27□□□□□ -0.93
LRP6-206ENST00000543091 PCDHB15Q9Y5E8 787 aa9.27□□□□□ -0.93
LRP6-206ENST00000543091 NF2P35240 595 aa9.27□□□□□ -0.93
LRP6-206ENST00000543091 SAFBQ15424 915 aaKnown RBP eCLIP9.27□□□□□ -0.93
LRP6-206ENST00000543091 USP44Q9H0E7 712 aa9.27□□□□□ -0.93
LRP6-206ENST00000543091 LDHBP07195 334 aaKnown RBP9.27□□□□□ -0.93
LRP6-206ENST00000543091 GBP4Q96PP9 640 aa9.27□□□□□ -0.93
LRP6-206ENST00000543091 MTMR7Q9Y216 660 aa9.27□□□□□ -0.93
LRP6-206ENST00000543091 ATP6V1DQ9Y5K8 247 aa9.27□□□□□ -0.93
LRP6-206ENST00000543091 PHLPP1O60346 1717 aa9.26□□□□□ -0.93
LRP6-206ENST00000543091 MINDY4BA8MYZ0 360 aa9.26□□□□□ -0.93
LRP6-206ENST00000543091 PPIP5K2O43314 1243 aa9.26□□□□□ -0.93
LRP6-206ENST00000543091 CYP7A1P22680 504 aa9.26□□□□□ -0.93
LRP6-206ENST00000543091 MCM2P49736 904 aa9.26□□□□□ -0.93
LRP6-206ENST00000543091 WDR66Q8TBY9 1149 aa9.26□□□□□ -0.93
LRP6-206ENST00000543091 CYP46A1Q9Y6A2 500 aa9.26□□□□□ -0.93
LRP6-206ENST00000543091 MEGF6O75095 1541 aa9.26□□□□□ -0.93
LRP6-206ENST00000543091 NPR1P16066 1061 aa9.26□□□□□ -0.93
LRP6-206ENST00000543091 ANKRD1Q15327 319 aa9.26□□□□□ -0.93
LRP6-206ENST00000543091 CNTNAP4Q9C0A0 1308 aa9.26□□□□□ -0.93
LRP6-206ENST00000543091 TCEAL9Q9UHQ7 104 aa9.26□□□□□ -0.93
LRP6-206ENST00000543091 CARMIL3Q8ND23 1372 aa9.26□□□□□ -0.93
LRP6-206ENST00000543091 A0A1B0GUL7 405 aa9.26□□□□□ -0.93
LRP6-206ENST00000543091 NUCB1Q02818 461 aa9.26□□□□□ -0.93
LRP6-206ENST00000543091 RASSF8Q8NHQ8 419 aa9.26□□□□□ -0.93
LRP6-206ENST00000543091 TBC1D22AQ8WUA7 517 aa9.26□□□□□ -0.93
LRP6-206ENST00000543091 F8W031 263 aaPredicted RBP9.25□□□□□ -0.93
LRP6-206ENST00000543091 ZBTB7AO95365 584 aa9.25□□□□□ -0.93
LRP6-206ENST00000543091 ARHGAP27Q6ZUM4 889 aa9.25□□□□□ -0.93
LRP6-206ENST00000543091 ZNF444Q8N0Y2 327 aaPredicted RBP9.25□□□□□ -0.93
LRP6-206ENST00000543091 GJA3Q9Y6H8 435 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms