RNA–Protein interactions for RNA: ENST00000543049.1

NLRC5-222, Transcript of NLR family CARD domain containing 5, human

TSL 2

Gene NLRC5, Length 484 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NLRC5-222	ENST00000543049	TM4SF4	P48230	202 aa		14.03	□□□□□ -0.16
NLRC5-222	ENST00000543049	SULF1	Q8IWU6	871 aa		14.03	□□□□□ -0.16
NLRC5-222	ENST00000543049	IL17RE	Q8NFR9	667 aa		14.03	□□□□□ -0.16
NLRC5-222	ENST00000543049	DPF2	Q92785	391 aa		14.03	□□□□□ -0.16
NLRC5-222	ENST00000543049	CDCA5	Q96FF9	252 aa		14.03	□□□□□ -0.16
NLRC5-222	ENST00000543049	RTFDC1	Q9BY42	306 aa	Predicted RBP	14.03	□□□□□ -0.16
NLRC5-222	ENST00000543049	KIAA2012	Q0VF49	1180 aa		14.02	□□□□□ -0.17
NLRC5-222	ENST00000543049	DPP8	Q6V1X1	898 aa	Predicted RBP	14.02	□□□□□ -0.17
NLRC5-222	ENST00000543049	RBM27	Q9P2N5	1060 aa	Known RBP	14.02	□□□□□ -0.17
NLRC5-222	ENST00000543049	RGL2	O15211	777 aa		14.01	□□□□□ -0.17
NLRC5-222	ENST00000543049	RIC1	Q4ADV7	1423 aa		14	□□□□□ -0.17
NLRC5-222	ENST00000543049	ASTN2	O75129	1339 aa	Predicted RBP	14	□□□□□ -0.17
NLRC5-222	ENST00000543049	PITPNM2	Q9BZ72	1349 aa		14	□□□□□ -0.17
NLRC5-222	ENST00000543049	NBPF26	B4DH59	902 aa		14	□□□□□ -0.17
NLRC5-222	ENST00000543049	PSMD14	O00487	310 aa		14	□□□□□ -0.17
NLRC5-222	ENST00000543049	MKRN3	Q13064	507 aa	Known RBP	14	□□□□□ -0.17
NLRC5-222	ENST00000543049	NBPF10	Q6P3W6	841 aa	Known RBP	14	□□□□□ -0.17
NLRC5-222	ENST00000543049	C3orf67	Q6ZVT6	689 aa		14	□□□□□ -0.17
NLRC5-222	ENST00000543049	MOB2	Q70IA6	237 aa		14	□□□□□ -0.17
NLRC5-222	ENST00000543049	OTOP1	Q7RTM1	612 aa		14	□□□□□ -0.17
NLRC5-222	ENST00000543049	MORC1	Q86VD1	984 aa		14	□□□□□ -0.17
NLRC5-222	ENST00000543049	MPND	Q8N594	471 aa		14	□□□□□ -0.17
NLRC5-222	ENST00000543049	UBE2Q2L	H0YL09	131 aa		13.99	□□□□□ -0.17
NLRC5-222	ENST00000543049	POLR3GL	Q9BT43	218 aa		13.99	□□□□□ -0.17
NLRC5-222	ENST00000543049	TMEM106C	Q9BVX2	250 aa		13.99	□□□□□ -0.17
NLRC5-222	ENST00000543049	GGA3	Q9NZ52	723 aa		13.99	□□□□□ -0.17
NLRC5-222	ENST00000543049	BTBD11	A6QL63	1104 aa		13.98	□□□□□ -0.17
NLRC5-222	ENST00000543049	FKBP1B	P68106	108 aa		13.98	□□□□□ -0.17
NLRC5-222	ENST00000543049	KIF4B	Q2VIQ3	1234 aa		13.98	□□□□□ -0.17
NLRC5-222	ENST00000543049	CFHR5	Q9BXR6	569 aa		13.98	□□□□□ -0.17
NLRC5-222	ENST00000543049	PTPN22	Q9Y2R2	807 aa		13.98	□□□□□ -0.17
NLRC5-222	ENST00000543049	COL6A3	P12111	3177 aa		13.98	□□□□□ -0.17
NLRC5-222	ENST00000543049	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.98	□□□□□ -0.17
NLRC5-222	ENST00000543049	KIAA0100	Q14667	2235 aa	Known RBP	13.97	□□□□□ -0.17
NLRC5-222	ENST00000543049	GNAT3	A8MTJ3	354 aa		13.97	□□□□□ -0.17
NLRC5-222	ENST00000543049	GPT	P24298	496 aa		13.97	□□□□□ -0.17
NLRC5-222	ENST00000543049	SP8	Q8IXZ3	490 aa		13.97	□□□□□ -0.17
NLRC5-222	ENST00000543049	ARMC5	Q96C12	935 aa		13.97	□□□□□ -0.17
NLRC5-222	ENST00000543049	SNRPA1	P09661	255 aa	Known RBP	13.96	□□□□□ -0.17
NLRC5-222	ENST00000543049	SREBF2	Q12772	1141 aa		13.96	□□□□□ -0.17
NLRC5-222	ENST00000543049	SUSD4	Q5VX71	490 aa		13.96	□□□□□ -0.17
NLRC5-222	ENST00000543049	NGEF	Q8N5V2	710 aa		13.96	□□□□□ -0.17
NLRC5-222	ENST00000543049	HTT	P42858	3142 aa		13.96	□□□□□ -0.18
NLRC5-222	ENST00000543049	CEP290	O15078	2479 aa		13.96	□□□□□ -0.18
NLRC5-222	ENST00000543049	ABCC4	O15439	1325 aa		13.95	□□□□□ -0.18
NLRC5-222	ENST00000543049	RPS12	P25398	132 aa	Known RBP	13.95	□□□□□ -0.18
NLRC5-222	ENST00000543049	ANGEL2	Q5VTE6	544 aa	Known RBP	13.95	□□□□□ -0.18
NLRC5-222	ENST00000543049	NLRP3	Q96P20	1036 aa		13.95	□□□□□ -0.18
NLRC5-222	ENST00000543049	DBNDD1	Q9H9R9	158 aa		13.95	□□□□□ -0.18
NLRC5-222	ENST00000543049	KCNQ5	Q9NR82	932 aa		13.95	□□□□□ -0.18
NLRC5-222	ENST00000543049	BBOX1	O75936	387 aa		13.94	□□□□□ -0.18
NLRC5-222	ENST00000543049	TTLL12	Q14166	644 aa	Predicted RBP	13.94	□□□□□ -0.18
NLRC5-222	ENST00000543049	UBN2	Q6ZU65	1347 aa		13.93	□□□□□ -0.18
NLRC5-222	ENST00000543049	CENPF	P49454	3210 aa		13.93	□□□□□ -0.18
NLRC5-222	ENST00000543049	SCARF1	Q14162	830 aa		13.93	□□□□□ -0.18
NLRC5-222	ENST00000543049	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.93	□□□□□ -0.18
NLRC5-222	ENST00000543049	SCAF8	Q9UPN6	1271 aa	Known RBP	13.93	□□□□□ -0.18
NLRC5-222	ENST00000543049	SIPA1L3	O60292	1781 aa	Predicted RBP	13.93	□□□□□ -0.18
NLRC5-222	ENST00000543049	ERVV-1	B6SEH8	477 aa		13.92	□□□□□ -0.18
NLRC5-222	ENST00000543049	RIMBP2	O15034	1052 aa		13.92	□□□□□ -0.18
NLRC5-222	ENST00000543049	NTSR2	O95665	410 aa		13.92	□□□□□ -0.18
NLRC5-222	ENST00000543049	ALDH1A1	P00352	501 aa		13.92	□□□□□ -0.18
NLRC5-222	ENST00000543049	WASHC4	Q2M389	1173 aa		13.92	□□□□□ -0.18
NLRC5-222	ENST00000543049	SLC4A8	Q2Y0W8	1093 aa		13.92	□□□□□ -0.18
NLRC5-222	ENST00000543049	PRAMEF18	Q5VWM3	479 aa		13.92	□□□□□ -0.18
NLRC5-222	ENST00000543049	CD99L2	Q8TCZ2	262 aa		13.92	□□□□□ -0.18
NLRC5-222	ENST00000543049	DPF3	Q92784	378 aa		13.92	□□□□□ -0.18
NLRC5-222	ENST00000543049	PANK3	Q9H999	370 aa		13.92	□□□□□ -0.18
NLRC5-222	ENST00000543049	BRCA2	P51587	3418 aa		13.91	□□□□□ -0.18
NLRC5-222	ENST00000543049	ERO1A	Q96HE7	468 aa		13.91	□□□□□ -0.18
NLRC5-222	ENST00000543049	EFCC1	Q9HA90	598 aa		13.91	□□□□□ -0.18
NLRC5-222	ENST00000543049	MYC	P01106	439 aa	Predicted RBP	13.9	□□□□□ -0.18
NLRC5-222	ENST00000543049	DOK7	Q18PE1	504 aa		13.9	□□□□□ -0.18
NLRC5-222	ENST00000543049	TTLL7	Q6ZT98	887 aa		13.9	□□□□□ -0.18
NLRC5-222	ENST00000543049	GAS2L2	Q8NHY3	880 aa		13.9	□□□□□ -0.18
NLRC5-222	ENST00000543049	ZNF333	Q96JL9	665 aa		13.9	□□□□□ -0.18
NLRC5-222	ENST00000543049	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.9	□□□□□ -0.18
NLRC5-222	ENST00000543049	MAP3K15	Q6ZN16	1313 aa		13.9	□□□□□ -0.19
NLRC5-222	ENST00000543049	RTL9	Q8NET4	1388 aa		13.89	□□□□□ -0.19
NLRC5-222	ENST00000543049	WTIP	A6NIX2	430 aa	Predicted RBP	13.89	□□□□□ -0.19
NLRC5-222	ENST00000543049	SOX1	O00570	391 aa	Predicted RBP	13.89	□□□□□ -0.19
NLRC5-222	ENST00000543049	ECE2	O60344	883 aa		13.89	□□□□□ -0.19
NLRC5-222	ENST00000543049	TCIRG1	Q13488	830 aa		13.89	□□□□□ -0.19
NLRC5-222	ENST00000543049	PPP1R42	Q7Z4L9	355 aa		13.89	□□□□□ -0.19
NLRC5-222	ENST00000543049	ZNF34	Q8IZ26	560 aa		13.89	□□□□□ -0.19
NLRC5-222	ENST00000543049	LRCH3	Q96II8	777 aa		13.89	□□□□□ -0.19
NLRC5-222	ENST00000543049	PRO3102	Q9H379	93 aa		13.89	□□□□□ -0.19
NLRC5-222	ENST00000543049	ZBTB3	Q9H5J0	574 aa		13.89	□□□□□ -0.19
NLRC5-222	ENST00000543049	NUP98	P52948	1817 aa		13.88	□□□□□ -0.19
NLRC5-222	ENST00000543049	CEMIP	Q8WUJ3	1361 aa		13.88	□□□□□ -0.19
NLRC5-222	ENST00000543049	RANBP2	P49792	3224 aa	Known RBP	13.88	□□□□□ -0.19
NLRC5-222	ENST00000543049	PTPN12	Q05209	780 aa	Known RBP	13.88	□□□□□ -0.19
NLRC5-222	ENST00000543049	SLC10A5	Q5PT55	438 aa		13.88	□□□□□ -0.19
NLRC5-222	ENST00000543049	KIF6	Q6ZMV9	814 aa		13.88	□□□□□ -0.19
NLRC5-222	ENST00000543049	NBPF11	Q86T75	865 aa		13.88	□□□□□ -0.19
NLRC5-222	ENST00000543049	IFNL1	Q8IU54	200 aa		13.88	□□□□□ -0.19
NLRC5-222	ENST00000543049	C6orf229	H3BNL8	230 aa		13.87	□□□□□ -0.19
NLRC5-222	ENST00000543049	DIAPH1	O60610	1272 aa	Known RBP	13.87	□□□□□ -0.19
NLRC5-222	ENST00000543049	VIL1	P09327	827 aa	Known RBP	13.87	□□□□□ -0.19
NLRC5-222	ENST00000543049	SPRYD7	Q5W111	196 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms