RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 CAMK4Q16566 473 aa12.01□□□□□ -0.49
TOP3A-208ENST00000542570 ADGRB1O14514 1584 aa12.01□□□□□ -0.49
TOP3A-208ENST00000542570 POLR3DP05423 398 aaPredicted RBP12.01□□□□□ -0.49
TOP3A-208ENST00000542570 HOXB7P09629 217 aa12.01□□□□□ -0.49
TOP3A-208ENST00000542570 CRKLP46109 303 aaKnown RBP12.01□□□□□ -0.49
TOP3A-208ENST00000542570 ME1P48163 572 aa12.01□□□□□ -0.49
TOP3A-208ENST00000542570 MCM2P49736 904 aa12.01□□□□□ -0.49
TOP3A-208ENST00000542570 SAFBQ15424 915 aaKnown RBP eCLIP12.01□□□□□ -0.49
TOP3A-208ENST00000542570 CSPP1Q1MSJ5 1256 aa12.01□□□□□ -0.49
TOP3A-208ENST00000542570 ZSCAN25Q6NSZ9 544 aa12.01□□□□□ -0.49
TOP3A-208ENST00000542570 CCDC191Q8NCU4 936 aa12.01□□□□□ -0.49
TOP3A-208ENST00000542570 ZKSCAN3Q9BRR0 538 aa12.01□□□□□ -0.49
TOP3A-208ENST00000542570 USP26Q9BXU7 913 aa12.01□□□□□ -0.49
TOP3A-208ENST00000542570 C1orf167Q5SNV9 1468 aa12□□□□□ -0.49
TOP3A-208ENST00000542570 GREM2Q9H772 168 aa12□□□□□ -0.49
TOP3A-208ENST00000542570 SEC31BQ9NQW1 1179 aa12□□□□□ -0.49
TOP3A-208ENST00000542570 SRP68Q9UHB9 627 aaKnown RBP12□□□□□ -0.49
TOP3A-208ENST00000542570 PNPLA6Q8IY17 1366 aa12□□□□□ -0.49
TOP3A-208ENST00000542570 MPHOSPH10O00566 681 aaKnown RBP12□□□□□ -0.49
TOP3A-208ENST00000542570 USPL1Q5W0Q7 1092 aa12□□□□□ -0.49
TOP3A-208ENST00000542570 XAGE2Q96GT9 111 aa12□□□□□ -0.49
TOP3A-208ENST00000542570 CTNNA3Q9UI47 895 aa12□□□□□ -0.49
TOP3A-208ENST00000542570 LIMCH1Q9UPQ0 1083 aa12□□□□□ -0.49
TOP3A-208ENST00000542570 IFIT3O14879 490 aaKnown RBP11.99□□□□□ -0.49
TOP3A-208ENST00000542570 MAGEB6Q8N7X4 407 aa11.99□□□□□ -0.49
TOP3A-208ENST00000542570 SSH3Q8TE77 659 aa11.99□□□□□ -0.49
TOP3A-208ENST00000542570 NEK1Q96PY6 1258 aa11.99□□□□□ -0.49
TOP3A-208ENST00000542570 MKNK2Q9HBH9 465 aa11.99□□□□□ -0.49
TOP3A-208ENST00000542570 CDK12Q9NYV4 1490 aaPredicted RBP11.99□□□□□ -0.49
TOP3A-208ENST00000542570 IGKV5-2P06315 115 aa11.99□□□□□ -0.49
TOP3A-208ENST00000542570 VAT1LQ9HCJ6 419 aa11.99□□□□□ -0.49
TOP3A-208ENST00000542570 PRDM1O75626 825 aa11.99□□□□□ -0.49
TOP3A-208ENST00000542570 SKOR2Q2VWA4 1001 aaPredicted RBP11.99□□□□□ -0.49
TOP3A-208ENST00000542570 PALD1Q9ULE6 856 aa11.99□□□□□ -0.49
TOP3A-208ENST00000542570 ZAP70P43403 619 aa11.98□□□□□ -0.49
TOP3A-208ENST00000542570 STK38Q15208 465 aa11.98□□□□□ -0.49
TOP3A-208ENST00000542570 PANK2Q9BZ23 570 aa11.98□□□□□ -0.49
TOP3A-208ENST00000542570 BABAM1Q9NWV8 329 aa11.98□□□□□ -0.49
TOP3A-208ENST00000542570 MROH2AA6NES4 1674 aa11.98□□□□□ -0.49
TOP3A-208ENST00000542570 GJB2P29033 226 aa11.98□□□□□ -0.49
TOP3A-208ENST00000542570 ADORA1P30542 326 aa11.98□□□□□ -0.49
TOP3A-208ENST00000542570 FAM173BQ6P4H8 233 aa11.98□□□□□ -0.49
TOP3A-208ENST00000542570 GOLGA8BA8MQT2 603 aa11.98□□□□□ -0.49
TOP3A-208ENST00000542570 MCMDC2Q4G0Z9 681 aa11.98□□□□□ -0.49
TOP3A-208ENST00000542570 CCDC73Q6ZRK6 1079 aa11.98□□□□□ -0.49
TOP3A-208ENST00000542570 RBM27Q9P2N5 1060 aaKnown RBP11.98□□□□□ -0.49
TOP3A-208ENST00000542570 CDK11BP21127 795 aaKnown RBP11.97□□□□□ -0.49
TOP3A-208ENST00000542570 PICALMQ13492 652 aa11.97□□□□□ -0.49
TOP3A-208ENST00000542570 FAM196AQ6ZSG2 479 aa11.97□□□□□ -0.49
TOP3A-208ENST00000542570 AK2P54819 239 aa11.97□□□□□ -0.49
TOP3A-208ENST00000542570 SLC4A4Q9Y6R1 1079 aa11.97□□□□□ -0.49
TOP3A-208ENST00000542570 WDR33Q9C0J8 1336 aaKnown RBP11.97□□□□□ -0.49
TOP3A-208ENST00000542570 ATG3Q9NT62 314 aa11.97□□□□□ -0.49
TOP3A-208ENST00000542570 STX8Q9UNK0 236 aa11.97□□□□□ -0.49
TOP3A-208ENST00000542570 AGLP35573 1532 aa11.97□□□□□ -0.49
TOP3A-208ENST00000542570 GOLGA6L19H0YKK7 550 aa11.96□□□□□ -0.49
TOP3A-208ENST00000542570 PDCP20941 246 aa11.96□□□□□ -0.49
TOP3A-208ENST00000542570 GYG1P46976 350 aa11.96□□□□□ -0.49
TOP3A-208ENST00000542570 CNBD1Q8NA66 436 aa11.96□□□□□ -0.49
TOP3A-208ENST00000542570 MROH1Q8NDA8 1641 aa11.96□□□□□ -0.49
TOP3A-208ENST00000542570 SYCE3A1L190 88 aa11.96□□□□□ -0.49
TOP3A-208ENST00000542570 NBPF26B4DH59 902 aa11.96□□□□□ -0.49
TOP3A-208ENST00000542570 PTMSP20962 102 aa11.96□□□□□ -0.49
TOP3A-208ENST00000542570 KRT32Q14532 448 aa11.96□□□□□ -0.49
TOP3A-208ENST00000542570 NBPF14Q5TI25 921 aa11.96□□□□□ -0.49
TOP3A-208ENST00000542570 NBPF10Q6P3W6 841 aaKnown RBP11.96□□□□□ -0.49
TOP3A-208ENST00000542570 TRMT1LQ7Z2T5 733 aaKnown RBP11.96□□□□□ -0.49
TOP3A-208ENST00000542570 NBPF15Q8N660 670 aa11.96□□□□□ -0.49
TOP3A-208ENST00000542570 MYO3AQ8NEV4 1616 aa11.96□□□□□ -0.49
TOP3A-208ENST00000542570 PTH1RQ03431 593 aa11.96□□□□□ -0.5
TOP3A-208ENST00000542570 ANKRD1Q15327 319 aa11.96□□□□□ -0.5
TOP3A-208ENST00000542570 CREB3L3Q68CJ9 461 aa11.96□□□□□ -0.5
TOP3A-208ENST00000542570 TTLL5Q6EMB2 1281 aa11.96□□□□□ -0.5
TOP3A-208ENST00000542570 Q6ZUG5 572 aa11.96□□□□□ -0.5
TOP3A-208ENST00000542570 ANTXR1Q9H6X2 564 aa11.96□□□□□ -0.5
TOP3A-208ENST00000542570 PREX1Q8TCU6 1659 aa11.96□□□□□ -0.5
TOP3A-208ENST00000542570 APOBRQ0VD83 1088 aa11.96□□□□□ -0.5
TOP3A-208ENST00000542570 RBM26Q5T8P6 1007 aaKnown RBP11.96□□□□□ -0.5
TOP3A-208ENST00000542570 IL27Q8NEV9 243 aa11.96□□□□□ -0.5
TOP3A-208ENST00000542570 CWC22Q9HCG8 908 aaKnown RBP11.96□□□□□ -0.5
TOP3A-208ENST00000542570 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.96□□□□□ -0.52e-7■■□□□ 13.3
TOP3A-208ENST00000542570 LRRC7Q96NW7 1537 aa11.95□□□□□ -0.5
TOP3A-208ENST00000542570 PDE8AO60658 829 aa11.95□□□□□ -0.5
TOP3A-208ENST00000542570 BCAMP50895 628 aa11.95□□□□□ -0.5
TOP3A-208ENST00000542570 SEPT12Q8IYM1 358 aa11.95□□□□□ -0.5
TOP3A-208ENST00000542570 A0A0D9SFI3 127 aa11.95□□□□□ -0.5
TOP3A-208ENST00000542570 SPATA32Q96LK8 384 aa11.95□□□□□ -0.5
TOP3A-208ENST00000542570 NCOA5Q9HCD5 579 aaKnown RBP11.95□□□□□ -0.5
TOP3A-208ENST00000542570 DBNLQ9UJU6 430 aaKnown RBP11.95□□□□□ -0.5
TOP3A-208ENST00000542570 CTDP1Q9Y5B0 961 aaPredicted RBP11.95□□□□□ -0.5
TOP3A-208ENST00000542570 KLF18A0A0U1RQI7 1052 aa11.95□□□□□ -0.5
TOP3A-208ENST00000542570 CHGBP05060 677 aa11.95□□□□□ -0.5
TOP3A-208ENST00000542570 SLC3A2P08195 630 aaKnown RBP11.95□□□□□ -0.5
TOP3A-208ENST00000542570 TMEM67Q5HYA8 995 aa11.95□□□□□ -0.5
TOP3A-208ENST00000542570 CD2BP2O95400 341 aaKnown RBP11.94□□□□□ -0.5
TOP3A-208ENST00000542570 ST5P78524 1137 aa11.94□□□□□ -0.5
TOP3A-208ENST00000542570 NAA16Q6N069 864 aaPredicted RBP11.94□□□□□ -0.5
TOP3A-208ENST00000542570 SASS6Q6UVJ0 657 aa11.94□□□□□ -0.5
TOP3A-208ENST00000542570 TRIM22Q8IYM9 498 aa11.94□□□□□ -0.5
TOP3A-208ENST00000542570 ARMT1Q9H993 441 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms