RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 PIM2Q9P1W9 311 aa6.51□□□□□ -1.37
SNHG1-214ENST00000540865 PCDHGC3Q9UN70 934 aa6.51□□□□□ -1.37
SNHG1-214ENST00000540865 PCDHB15Q9Y5E8 787 aa6.51□□□□□ -1.37
SNHG1-214ENST00000540865 RTL1A6NKG5 1358 aa6.51□□□□□ -1.37
SNHG1-214ENST00000540865 KCPQ6ZWJ8 1503 aa6.5□□□□□ -1.37
SNHG1-214ENST00000540865 ROCK2O75116 1388 aaKnown RBP6.5□□□□□ -1.37
SNHG1-214ENST00000540865 VEGFAP15692 232 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-214ENST00000540865 TMEM132AQ24JP5 1023 aa6.5□□□□□ -1.37
SNHG1-214ENST00000540865 SH3D19Q5HYK7 790 aa6.5□□□□□ -1.37
SNHG1-214ENST00000540865 RSBN1LQ6PCB5 846 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-214ENST00000540865 USHBP1Q8N6Y0 703 aa6.5□□□□□ -1.37
SNHG1-214ENST00000540865 L3MBTL2Q969R5 705 aa6.5□□□□□ -1.37
SNHG1-214ENST00000540865 EMID1Q96A84 441 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-214ENST00000540865 PRR14Q9BWN1 585 aa6.5□□□□□ -1.37
SNHG1-214ENST00000540865 RSPH6AQ9H0K4 717 aa6.5□□□□□ -1.37
SNHG1-214ENST00000540865 PRDM10Q9NQV6 1147 aa6.5□□□□□ -1.37
SNHG1-214ENST00000540865 SLC27A5Q9Y2P5 690 aa6.5□□□□□ -1.37
SNHG1-214ENST00000540865 PARP3Q9Y6F1 533 aa6.5□□□□□ -1.37
SNHG1-214ENST00000540865 C4BP0C0L5 1744 aa6.5□□□□□ -1.37
SNHG1-214ENST00000540865 SMG6Q86US8 1419 aaKnown RBP6.5□□□□□ -1.37
SNHG1-214ENST00000540865 C5P01031 1676 aa6.49□□□□□ -1.37
SNHG1-214ENST00000540865 FAM208AQ9UK61 1670 aaKnown RBP6.49□□□□□ -1.37
SNHG1-214ENST00000540865 A0A1W2PP64 1363 aa6.49□□□□□ -1.37
SNHG1-214ENST00000540865 GLTPD2A6NH11 291 aa6.49□□□□□ -1.37
SNHG1-214ENST00000540865 FDX1P10109 184 aa6.49□□□□□ -1.37
SNHG1-214ENST00000540865 CLK2P49760 499 aaKnown RBP6.49□□□□□ -1.37
SNHG1-214ENST00000540865 USP46P62068 366 aa6.49□□□□□ -1.37
SNHG1-214ENST00000540865 ITPK1Q13572 414 aa6.49□□□□□ -1.37
SNHG1-214ENST00000540865 SKIV2LQ15477 1246 aaKnown RBP6.49□□□□□ -1.37
SNHG1-214ENST00000540865 SYMPKQ92797 1274 aaKnown RBP6.49□□□□□ -1.37
SNHG1-214ENST00000540865 RTCBQ9Y3I0 505 aaKnown RBP6.49□□□□□ -1.37
SNHG1-214ENST00000540865 MON2Q7Z3U7 1717 aa6.49□□□□□ -1.37
SNHG1-214ENST00000540865 RNF223E7ERA6 249 aa6.48□□□□□ -1.37
SNHG1-214ENST00000540865 SPTLC1O15269 473 aa6.48□□□□□ -1.37
SNHG1-214ENST00000540865 TLL1O43897 1013 aa6.48□□□□□ -1.37
SNHG1-214ENST00000540865 GYS1P13807 737 aa6.48□□□□□ -1.37
SNHG1-214ENST00000540865 FBLN1P23142 703 aa6.48□□□□□ -1.37
SNHG1-214ENST00000540865 RFC4P35249 363 aa6.48□□□□□ -1.37
SNHG1-214ENST00000540865 SLC19A1P41440 591 aa6.48□□□□□ -1.37
SNHG1-214ENST00000540865 RRS1Q15050 365 aaKnown RBP6.48□□□□□ -1.37
SNHG1-214ENST00000540865 DIXDC1Q155Q3 683 aa6.48□□□□□ -1.37
SNHG1-214ENST00000540865 QPCTQ16769 361 aa6.48□□□□□ -1.37
SNHG1-214ENST00000540865 RC3H1Q5TC82 1133 aaKnown RBP6.48□□□□□ -1.37
SNHG1-214ENST00000540865 SCUBE3Q8IX30 993 aa6.48□□□□□ -1.37
SNHG1-214ENST00000540865 TMOD3Q9NYL9 352 aa6.48□□□□□ -1.37
SNHG1-214ENST00000540865 ASAP1Q9ULH1 1129 aa6.48□□□□□ -1.37
SNHG1-214ENST00000540865 SPG7Q9UQ90 795 aa6.48□□□□□ -1.37
SNHG1-214ENST00000540865 INSRP06213 1382 aa6.47□□□□□ -1.37
SNHG1-214ENST00000540865 LTN1O94822 1766 aa6.47□□□□□ -1.37
SNHG1-214ENST00000540865 FOXN1O15353 648 aa6.47□□□□□ -1.37
SNHG1-214ENST00000540865 ZPR1O75312 459 aa6.47□□□□□ -1.37
SNHG1-214ENST00000540865 RPS6KA4O75676 772 aa6.47□□□□□ -1.37
SNHG1-214ENST00000540865 LMNB1P20700 586 aa6.47□□□□□ -1.37
SNHG1-214ENST00000540865 CTCFP49711 727 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-214ENST00000540865 GRIPAP1Q4V328 841 aa6.47□□□□□ -1.37
SNHG1-214ENST00000540865 RNF19BQ6ZMZ0 732 aa6.47□□□□□ -1.37
SNHG1-214ENST00000540865 ATG3Q9NT62 314 aa6.47□□□□□ -1.37
SNHG1-214ENST00000540865 TOGARAM1Q9Y4F4 1720 aa6.47□□□□□ -1.37
SNHG1-214ENST00000540865 KIF24Q5T7B8 1368 aa6.46□□□□□ -1.37
SNHG1-214ENST00000540865 FAM187AA6NFU0 413 aa6.46□□□□□ -1.38
SNHG1-214ENST00000540865 ST8SIA5O15466 376 aa6.46□□□□□ -1.38
SNHG1-214ENST00000540865 KDM6AO15550 1401 aaPredicted RBP6.46□□□□□ -1.38
SNHG1-214ENST00000540865 DGAT1O75907 488 aa6.46□□□□□ -1.38
SNHG1-214ENST00000540865 HSP90AB2PQ58FF8 381 aa6.46□□□□□ -1.38
SNHG1-214ENST00000540865 UBR3Q6ZT12 1888 aa6.46□□□□□ -1.38
SNHG1-214ENST00000540865 PCMTD1Q96MG8 357 aaPredicted RBP6.46□□□□□ -1.38
SNHG1-214ENST00000540865 CNTNAP4Q9C0A0 1308 aa6.46□□□□□ -1.38
SNHG1-214ENST00000540865 C6orf229H3BNL8 230 aa6.45□□□□□ -1.38
SNHG1-214ENST00000540865 TNFRSF10AO00220 468 aa6.45□□□□□ -1.38
SNHG1-214ENST00000540865 FYB1O15117 783 aa6.45□□□□□ -1.38
SNHG1-214ENST00000540865 NR1I2O75469 434 aa6.45□□□□□ -1.38
SNHG1-214ENST00000540865 SPRYD7Q5W111 196 aa6.45□□□□□ -1.38
SNHG1-214ENST00000540865 IFNL2Q8IZJ0 200 aa6.45□□□□□ -1.38
SNHG1-214ENST00000540865 AIDAQ96BJ3 306 aa6.45□□□□□ -1.38
SNHG1-214ENST00000540865 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.45□□□□□ -1.38
SNHG1-214ENST00000540865 CARD11Q9BXL7 1154 aa6.45□□□□□ -1.38
SNHG1-214ENST00000540865 GOPCQ9HD26 462 aa6.45□□□□□ -1.38
SNHG1-214ENST00000540865 MKRN1Q9UHC7 482 aaKnown RBP6.45□□□□□ -1.38
SNHG1-214ENST00000540865 TAF1LQ8IZX4 1826 aa6.45□□□□□ -1.38
SNHG1-214ENST00000540865 KIF13BQ9NQT8 1826 aa6.45□□□□□ -1.38
SNHG1-214ENST00000540865 KIAA1551Q9HCM1 1747 aa6.45□□□□□ -1.38
SNHG1-214ENST00000540865 FLT4P35916 1363 aa6.44□□□□□ -1.38
SNHG1-214ENST00000540865 KDRP35968 1356 aa6.44□□□□□ -1.38
SNHG1-214ENST00000540865 CNTNAP1P78357 1384 aa6.44□□□□□ -1.38
SNHG1-214ENST00000540865 PHKG2P15735 406 aa6.44□□□□□ -1.38
SNHG1-214ENST00000540865 CHRNA5P30532 468 aa6.44□□□□□ -1.38
SNHG1-214ENST00000540865 RGS19P49795 217 aa6.44□□□□□ -1.38
SNHG1-214ENST00000540865 PRR20EP86478 221 aa6.44□□□□□ -1.38
SNHG1-214ENST00000540865 PRR20CP86479 221 aa6.44□□□□□ -1.38
SNHG1-214ENST00000540865 PRR20DP86480 221 aa6.44□□□□□ -1.38
SNHG1-214ENST00000540865 PRR20BP86481 221 aa6.44□□□□□ -1.38
SNHG1-214ENST00000540865 PRR20AP86496 221 aa6.44□□□□□ -1.38
SNHG1-214ENST00000540865 RASSF7Q02833 373 aa6.44□□□□□ -1.38
SNHG1-214ENST00000540865 DDR1Q08345 913 aa6.44□□□□□ -1.38
SNHG1-214ENST00000540865 RTL5Q5HYW3 569 aaPredicted RBP6.44□□□□□ -1.38
SNHG1-214ENST00000540865 LCE2AQ5TA79 106 aaPredicted RBP6.44□□□□□ -1.38
SNHG1-214ENST00000540865 THAP11Q96EK4 314 aa6.44□□□□□ -1.38
SNHG1-214ENST00000540865 ABHD8Q96I13 439 aa6.44□□□□□ -1.38
SNHG1-214ENST00000540865 SLC4A9Q96Q91 983 aa6.44□□□□□ -1.38
SNHG1-214ENST00000540865 NCAPD2Q15021 1401 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms