RNA–Protein interactions for RNA: ENST00000540809.1

PHC1-209, Transcript of polyhomeotic homolog 1, humanhuman

TSL 2

Gene PHC1, Length 793 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-209ENST00000540809 CDCA8Q53HL2 280 aa10.48□□□□□ -0.73
PHC1-209ENST00000540809 MSL1Q68DK7 614 aa10.48□□□□□ -0.73
PHC1-209ENST00000540809 PTCRAQ6ISU1 281 aaPredicted RBP10.48□□□□□ -0.73
PHC1-209ENST00000540809 PIGBQ92521 554 aa10.48□□□□□ -0.73
PHC1-209ENST00000540809 FLT4P35916 1363 aa10.48□□□□□ -0.73
PHC1-209ENST00000540809 NSD3Q9BZ95 1437 aa10.48□□□□□ -0.73
PHC1-209ENST00000540809 CHD4Q14839 1912 aa10.47□□□□□ -0.73
PHC1-209ENST00000540809 YBX3P16989 372 aaKnown RBP eCLIP10.47□□□□□ -0.73
PHC1-209ENST00000540809 SSTR3P32745 418 aaPredicted RBP10.47□□□□□ -0.73
PHC1-209ENST00000540809 RETREG3Q86VR2 466 aa10.47□□□□□ -0.73
PHC1-209ENST00000540809 POLKQ9UBT6 870 aa10.47□□□□□ -0.73
PHC1-209ENST00000540809 WASHC2AQ641Q2 1341 aa10.47□□□□□ -0.73
PHC1-209ENST00000540809 PCDH11XQ9BZA7 1347 aa10.47□□□□□ -0.73
PHC1-209ENST00000540809 PCDH11YQ9BZA8 1340 aa10.47□□□□□ -0.73
PHC1-209ENST00000540809 KIF20BQ96Q89 1820 aa10.47□□□□□ -0.73
PHC1-209ENST00000540809 WNT7BP56706 349 aa10.46□□□□□ -0.73
PHC1-209ENST00000540809 RC3H1Q5TC82 1133 aaKnown RBP10.46□□□□□ -0.73
PHC1-209ENST00000540809 TREML4Q6UXN2 200 aa10.46□□□□□ -0.73
PHC1-209ENST00000540809 NUTM1Q86Y26 1132 aa10.46□□□□□ -0.73
PHC1-209ENST00000540809 CCDC24Q8N4L8 307 aa10.46□□□□□ -0.73
PHC1-209ENST00000540809 SPIRE2Q8WWL2 714 aa10.46□□□□□ -0.73
PHC1-209ENST00000540809 PCGF6Q9BYE7 350 aa10.46□□□□□ -0.73
PHC1-209ENST00000540809 KIF24Q5T7B8 1368 aa10.46□□□□□ -0.74
PHC1-209ENST00000540809 PALLDQ8WX93 1383 aa10.46□□□□□ -0.74
PHC1-209ENST00000540809 SMG6Q86US8 1419 aaKnown RBP10.46□□□□□ -0.74
PHC1-209ENST00000540809 MAP2P11137 1827 aaKnown RBP10.45□□□□□ -0.74
PHC1-209ENST00000540809 ITGB4P16144 1822 aa10.45□□□□□ -0.74
PHC1-209ENST00000540809 FDX1P10109 184 aa10.45□□□□□ -0.74
PHC1-209ENST00000540809 TNNT2P45379 298 aaPredicted RBP10.45□□□□□ -0.74
PHC1-209ENST00000540809 AMHR2Q16671 573 aa10.45□□□□□ -0.74
PHC1-209ENST00000540809 TIMELESSQ9UNS1 1208 aa10.45□□□□□ -0.74
PHC1-209ENST00000540809 TOGARAM1Q9Y4F4 1720 aa10.44□□□□□ -0.74
PHC1-209ENST00000540809 NCAPD2Q15021 1401 aa10.44□□□□□ -0.74
PHC1-209ENST00000540809 EIF4A2Q14240 407 aaKnown RBP10.44□□□□□ -0.74
PHC1-209ENST00000540809 ZC3H15Q8WU90 426 aaKnown RBP10.44□□□□□ -0.74
PHC1-209ENST00000540809 HPS1Q92902 700 aa10.44□□□□□ -0.74
PHC1-209ENST00000540809 POLR3GLQ9BT43 218 aa10.44□□□□□ -0.74
PHC1-209ENST00000540809 ASAP1Q9ULH1 1129 aa10.44□□□□□ -0.74
PHC1-209ENST00000540809 TAF1LQ8IZX4 1826 aa10.44□□□□□ -0.74
PHC1-209ENST00000540809 SIAH2O43255 324 aa10.43□□□□□ -0.74
PHC1-209ENST00000540809 C1QTNF8P60827 252 aa10.43□□□□□ -0.74
PHC1-209ENST00000540809 ITPK1Q13572 414 aa10.43□□□□□ -0.74
PHC1-209ENST00000540809 LINC00116Q8NCU8 138 aa10.43□□□□□ -0.74
PHC1-209ENST00000540809 SPG7Q9UQ90 795 aa10.43□□□□□ -0.74
PHC1-209ENST00000540809 C5P01031 1676 aa10.43□□□□□ -0.74
PHC1-209ENST00000540809 PHKG2P15735 406 aa10.42□□□□□ -0.74
PHC1-209ENST00000540809 NDUFV2P19404 249 aa10.42□□□□□ -0.74
PHC1-209ENST00000540809 SMARCC1Q92922 1105 aaPredicted RBP10.42□□□□□ -0.74
PHC1-209ENST00000540809 NUDT12Q9BQG2 462 aa10.42□□□□□ -0.74
PHC1-209ENST00000540809 PANK3Q9H999 370 aa10.42□□□□□ -0.74
PHC1-209ENST00000540809 ATG3Q9NT62 314 aa10.42□□□□□ -0.74
PHC1-209ENST00000540809 PKD1L3Q7Z443 1732 aa10.41□□□□□ -0.74
PHC1-209ENST00000540809 LOC102724428A0A0B4J2F2 783 aa10.41□□□□□ -0.74
PHC1-209ENST00000540809 MOXD2PA6NHM9 499 aa10.41□□□□□ -0.74
PHC1-209ENST00000540809 HSPA5P11021 654 aaKnown RBP10.41□□□□□ -0.74
PHC1-209ENST00000540809 SIK1P57059 783 aa10.41□□□□□ -0.74
PHC1-209ENST00000540809 KRI1Q8N9T8 703 aaKnown RBP10.41□□□□□ -0.74
PHC1-209ENST00000540809 FLAD1Q8NFF5 587 aa10.41□□□□□ -0.74
PHC1-209ENST00000540809 SLC4A9Q96Q91 983 aa10.41□□□□□ -0.74
PHC1-209ENST00000540809 ATP13A2Q9NQ11 1180 aa10.41□□□□□ -0.74
PHC1-209ENST00000540809 C4BP0C0L5 1744 aa10.41□□□□□ -0.74
PHC1-209ENST00000540809 IFNL2Q8IZJ0 200 aa10.4□□□□□ -0.74
PHC1-209ENST00000540809 AK7Q96M32 723 aa10.4□□□□□ -0.74
PHC1-209ENST00000540809 TMOD3Q9NYL9 352 aa10.4□□□□□ -0.74
PHC1-209ENST00000540809 WWC3Q9ULE0 1092 aa10.4□□□□□ -0.74
PHC1-209ENST00000540809 CD2APQ9Y5K6 639 aa10.4□□□□□ -0.74
PHC1-209ENST00000540809 ANKRD26Q9UPS8 1709 aa10.4□□□□□ -0.74
PHC1-209ENST00000540809 UBR3Q6ZT12 1888 aa10.39□□□□□ -0.75
PHC1-209ENST00000540809 GRIN3BO60391 1043 aa10.39□□□□□ -0.75
PHC1-209ENST00000540809 GIGYF2Q6Y7W6 1299 aaKnown RBP10.39□□□□□ -0.75
PHC1-209ENST00000540809 SENP3-EIF4A1A0A087X0R7 540 aa10.38□□□□□ -0.75
PHC1-209ENST00000540809 C6orf229H3BNL8 230 aa10.38□□□□□ -0.75
PHC1-209ENST00000540809 SNRPBP14678 240 aaKnown RBP10.38□□□□□ -0.75
PHC1-209ENST00000540809 NFX1Q12986 1120 aaKnown RBP10.38□□□□□ -0.75
PHC1-209ENST00000540809 CEP350Q5VT06 3117 aa10.38□□□□□ -0.75
PHC1-209ENST00000540809 IGSF1Q8N6C5 1336 aa10.37□□□□□ -0.75
PHC1-209ENST00000540809 CLSPNQ9HAW4 1339 aa10.37□□□□□ -0.75
PHC1-209ENST00000540809 SSFA2P28290 1259 aa10.37□□□□□ -0.75
PHC1-209ENST00000540809 SH3BP2P78314 561 aa10.37□□□□□ -0.75
PHC1-209ENST00000540809 EIF4G2P78344 907 aaKnown RBP eCLIP10.37□□□□□ -0.75
PHC1-209ENST00000540809 LCE2CQ5TA81 110 aa10.37□□□□□ -0.75
PHC1-209ENST00000540809 AEBP1Q8IUX7 1158 aa10.37□□□□□ -0.75
PHC1-209ENST00000540809 EVA1BQ9NVM1 165 aa10.37□□□□□ -0.75
PHC1-209ENST00000540809 ERVV-2B6SEH9 535 aa10.36□□□□□ -0.75
PHC1-209ENST00000540809 CCNYL3P0C7X3 344 aa10.36□□□□□ -0.75
PHC1-209ENST00000540809 MS4A1P11836 297 aa10.36□□□□□ -0.75
PHC1-209ENST00000540809 HMGB2P26583 209 aaKnown RBP10.36□□□□□ -0.75
PHC1-209ENST00000540809 PTPRNQ16849 979 aa10.36□□□□□ -0.75
PHC1-209ENST00000540809 GIGYF1O75420 1035 aaPredicted RBP10.35□□□□□ -0.75
PHC1-209ENST00000540809 TTLL12Q14166 644 aaPredicted RBP10.35□□□□□ -0.75
PHC1-209ENST00000540809 PLEKHO1Q53GL0 409 aaPredicted RBP10.35□□□□□ -0.75
PHC1-209ENST00000540809 MORC1Q86VD1 984 aa10.35□□□□□ -0.75
PHC1-209ENST00000540809 TRIM47Q96LD4 638 aa10.35□□□□□ -0.75
PHC1-209ENST00000540809 ALDH1A1P00352 501 aa10.34□□□□□ -0.75
PHC1-209ENST00000540809 MMP10P09238 476 aa10.34□□□□□ -0.75
PHC1-209ENST00000540809 GJA5P36382 358 aa10.34□□□□□ -0.75
PHC1-209ENST00000540809 TRAPPC3LQ5T215 181 aa10.34□□□□□ -0.75
PHC1-209ENST00000540809 DESI1Q6ICB0 168 aa10.34□□□□□ -0.75
PHC1-209ENST00000540809 ZNF530Q6P9A1 599 aaPredicted RBP10.34□□□□□ -0.75
PHC1-209ENST00000540809 PARP9Q8IXQ6 854 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms