RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 SPATS2LQ9NUQ6 558 aaKnown RBP12.72□□□□□ -0.37
PBX1-212ENST00000540236 UBTFL1P0CB47 393 aaPredicted RBP12.72□□□□□ -0.37
PBX1-212ENST00000540236 CEP85LQ5SZL2 805 aa12.72□□□□□ -0.37
PBX1-212ENST00000540236 KCTD16Q68DU8 428 aa12.72□□□□□ -0.37
PBX1-212ENST00000540236 CLSTN2Q9H4D0 955 aa12.72□□□□□ -0.37
PBX1-212ENST00000540236 ZNF446Q9NWS9 450 aa12.72□□□□□ -0.37
PBX1-212ENST00000540236 FBXO3Q9UK99 471 aa12.72□□□□□ -0.37
PBX1-212ENST00000540236 GUCA1BQ9UMX6 200 aa12.72□□□□□ -0.37
PBX1-212ENST00000540236 MYO1FO00160 1098 aa12.71□□□□□ -0.37
PBX1-212ENST00000540236 MTX1Q13505 466 aa12.71□□□□□ -0.37
PBX1-212ENST00000540236 SIRT1Q96EB6 747 aa12.71□□□□□ -0.37
PBX1-212ENST00000540236 MARCKSP29966 332 aaPredicted RBP12.71□□□□□ -0.37
PBX1-212ENST00000540236 SPATA31E1Q6ZUB1 1445 aa12.71□□□□□ -0.37
PBX1-212ENST00000540236 PDE1AP54750 535 aa12.71□□□□□ -0.37
PBX1-212ENST00000540236 KRT24Q2M2I5 525 aa12.71□□□□□ -0.37
PBX1-212ENST00000540236 CTAGE9A4FU28 777 aa12.71□□□□□ -0.37
PBX1-212ENST00000540236 SLC3A2P08195 630 aaKnown RBP12.71□□□□□ -0.37
PBX1-212ENST00000540236 TSPYL4Q9UJ04 414 aa12.71□□□□□ -0.38
PBX1-212ENST00000540236 POTEB2H3BUK9 544 aa12.7□□□□□ -0.38
PBX1-212ENST00000540236 GPR161Q8N6U8 529 aaKnown RBP12.7□□□□□ -0.38
PBX1-212ENST00000540236 ZSCAN31Q96LW9 406 aaPredicted RBP12.7□□□□□ -0.38
PBX1-212ENST00000540236 KIF9Q9HAQ2 790 aa12.7□□□□□ -0.38
PBX1-212ENST00000540236 ABCB6Q9NP58 842 aa12.7□□□□□ -0.38
PBX1-212ENST00000540236 TEFQ10587 303 aa12.7□□□□□ -0.38
PBX1-212ENST00000540236 CC2D1AQ6P1N0 951 aaPredicted RBP12.7□□□□□ -0.38
PBX1-212ENST00000540236 CTCFLQ8NI51 663 aaPredicted RBP12.7□□□□□ -0.38
PBX1-212ENST00000540236 IFT81Q8WYA0 676 aa12.7□□□□□ -0.38
PBX1-212ENST00000540236 PPANQ9NQ55 473 aaKnown RBP12.7□□□□□ -0.38
PBX1-212ENST00000540236 SEMA3FQ13275 785 aa12.7□□□□□ -0.38
PBX1-212ENST00000540236 POTEDQ86YR6 584 aa12.7□□□□□ -0.38
PBX1-212ENST00000540236 GOPCQ9HD26 462 aa12.7□□□□□ -0.38
PBX1-212ENST00000540236 CDK13Q14004 1512 aaKnown RBP12.7□□□□□ -0.38
PBX1-212ENST00000540236 FAM170AA1A519 330 aa12.7□□□□□ -0.38
PBX1-212ENST00000540236 SMIM23A6NLE4 172 aa12.7□□□□□ -0.38
PBX1-212ENST00000540236 STIM1Q13586 685 aa12.7□□□□□ -0.38
PBX1-212ENST00000540236 SUGCTQ9HAC7 445 aa12.7□□□□□ -0.38
PBX1-212ENST00000540236 KIF1CO43896 1103 aaKnown RBP12.7□□□□□ -0.38
PBX1-212ENST00000540236 IQCA1Q86XH1 822 aa12.7□□□□□ -0.38
PBX1-212ENST00000540236 E7EVH7 732 aa12.69□□□□□ -0.38
PBX1-212ENST00000540236 DHX58Q96C10 678 aa12.69□□□□□ -0.38
PBX1-212ENST00000540236 BAG1Q99933 345 aaPredicted RBP12.69□□□□□ -0.38
PBX1-212ENST00000540236 ZBTB7BO15156 539 aaPredicted RBP12.69□□□□□ -0.38
PBX1-212ENST00000540236 PNMA8AQ86V59 439 aaPredicted RBP12.69□□□□□ -0.38
PBX1-212ENST00000540236 ZBTB10Q96DT7 871 aa12.69□□□□□ -0.38
PBX1-212ENST00000540236 PSMB7Q99436 277 aa12.69□□□□□ -0.38
PBX1-212ENST00000540236 A0A087WUV0 522 aaPredicted RBP12.69□□□□□ -0.38
PBX1-212ENST00000540236 EFCAB8A8MWE9 144 aa12.69□□□□□ -0.38
PBX1-212ENST00000540236 TULP2O00295 520 aa12.69□□□□□ -0.38
PBX1-212ENST00000540236 TXLNAP40222 546 aa12.69□□□□□ -0.38
PBX1-212ENST00000540236 DONSONQ9NYP3 566 aa12.69□□□□□ -0.38
PBX1-212ENST00000540236 KIF3BO15066 747 aa12.69□□□□□ -0.38
PBX1-212ENST00000540236 CAND2O75155 1236 aa12.69□□□□□ -0.38
PBX1-212ENST00000540236 CLSTN1O94985 981 aa12.69□□□□□ -0.38
PBX1-212ENST00000540236 CNGA1P29973 690 aa12.69□□□□□ -0.38
PBX1-212ENST00000540236 NFXL1Q6ZNB6 911 aa12.69□□□□□ -0.38
PBX1-212ENST00000540236 KSR1Q8IVT5 923 aa12.69□□□□□ -0.38
PBX1-212ENST00000540236 MCM10Q7L590 875 aa12.68□□□□□ -0.38
PBX1-212ENST00000540236 HOMEZQ8IX15 550 aa12.68□□□□□ -0.38
PBX1-212ENST00000540236 NEDD9Q14511 834 aa12.68□□□□□ -0.38
PBX1-212ENST00000540236 SNCBQ16143 134 aa12.68□□□□□ -0.38
PBX1-212ENST00000540236 FILIP1LQ4L180 1135 aa12.68□□□□□ -0.38
PBX1-212ENST00000540236 COBLO75128 1261 aa12.68□□□□□ -0.38
PBX1-212ENST00000540236 HNRNPH1P31943 449 aaKnown RBP12.68□□□□□ -0.38
PBX1-212ENST00000540236 PROSER2Q86WR7 435 aaPredicted RBP12.68□□□□□ -0.38
PBX1-212ENST00000540236 STK38LQ9Y2H1 464 aa12.68□□□□□ -0.38
PBX1-212ENST00000540236 TEX14Q8IWB6 1497 aa12.68□□□□□ -0.38
PBX1-212ENST00000540236 INSRP06213 1382 aa12.68□□□□□ -0.38
PBX1-212ENST00000540236 TRIM29Q14134 588 aa12.68□□□□□ -0.38
PBX1-212ENST00000540236 EXOC4Q96A65 974 aa12.68□□□□□ -0.38
PBX1-212ENST00000540236 FTOQ9C0B1 505 aaKnown RBP eCLIP12.68□□□□□ -0.38
PBX1-212ENST00000540236 CAMSAP2Q08AD1 1489 aa12.68□□□□□ -0.38
PBX1-212ENST00000540236 RNASE9P60153 205 aaKnown RBP12.68□□□□□ -0.38
PBX1-212ENST00000540236 MAP2K1Q02750 393 aaPredicted RBP12.68□□□□□ -0.38
PBX1-212ENST00000540236 IFT88Q13099 833 aa12.68□□□□□ -0.38
PBX1-212ENST00000540236 AP1G2O75843 785 aa12.67□□□□□ -0.38
PBX1-212ENST00000540236 NCBP3Q53F19 620 aaKnown RBP12.67□□□□□ -0.38
PBX1-212ENST00000540236 CHST3Q7LGC8 479 aa12.67□□□□□ -0.38
PBX1-212ENST00000540236 TEX11Q8IYF3 940 aa12.67□□□□□ -0.38
PBX1-212ENST00000540236 MRPL50Q8N5N7 158 aaKnown RBP12.67□□□□□ -0.38
PBX1-212ENST00000540236 USHBP1Q8N6Y0 703 aa12.67□□□□□ -0.38
PBX1-212ENST00000540236 KIF1BPQ96EK5 621 aa12.67□□□□□ -0.38
PBX1-212ENST00000540236 ERCC6Q03468 1493 aa12.67□□□□□ -0.38
PBX1-212ENST00000540236 STX17P56962 302 aa12.67□□□□□ -0.38
PBX1-212ENST00000540236 CAPS2Q9BXY5 557 aa12.67□□□□□ -0.38
PBX1-212ENST00000540236 USH1CQ9Y6N9 552 aa12.67□□□□□ -0.38
PBX1-212ENST00000540236 LARGE1O95461 756 aa12.67□□□□□ -0.38
PBX1-212ENST00000540236 CDC25CP30307 473 aa12.67□□□□□ -0.38
PBX1-212ENST00000540236 FANCCQ00597 558 aa12.67□□□□□ -0.38
PBX1-212ENST00000540236 RTL1A6NKG5 1358 aa12.67□□□□□ -0.38
PBX1-212ENST00000540236 FAM135AQ9P2D6 1515 aa12.67□□□□□ -0.38
PBX1-212ENST00000540236 CPLX2Q6PUV4 134 aaKnown RBP12.67□□□□□ -0.38
PBX1-212ENST00000540236 SNX14Q9Y5W7 946 aa12.67□□□□□ -0.38
PBX1-212ENST00000540236 FAM169AQ9Y6X4 670 aa12.67□□□□□ -0.38
PBX1-212ENST00000540236 SEPT14Q6ZU15 432 aa12.67□□□□□ -0.38
PBX1-212ENST00000540236 SPDL1Q96EA4 605 aa12.67□□□□□ -0.38
PBX1-212ENST00000540236 CABS1Q96KC9 395 aa12.67□□□□□ -0.38
PBX1-212ENST00000540236 MBIPQ9NS73 344 aa12.67□□□□□ -0.38
PBX1-212ENST00000540236 C9orf78Q9NZ63 289 aaPredicted RBP12.67□□□□□ -0.38
PBX1-212ENST00000540236 AACSQ86V21 672 aa12.66□□□□□ -0.38
PBX1-212ENST00000540236 RPUSD2Q8IZ73 545 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms