RNA–Protein interactions for RNA: ENST00000537304.5

LMO3-215, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 1,685 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-215ENST00000537304 NR1I2O75469 434 aa12.66□□□□□ -0.38
LMO3-215ENST00000537304 FBLN1P23142 703 aa12.66□□□□□ -0.38
LMO3-215ENST00000537304 CCDC93Q567U6 631 aa12.66□□□□□ -0.38
LMO3-215ENST00000537304 JAKMIP3Q5VZ66 844 aa12.66□□□□□ -0.38
LMO3-215ENST00000537304 CREB3L3Q68CJ9 461 aa12.66□□□□□ -0.38
LMO3-215ENST00000537304 PPP1R42Q7Z4L9 355 aa12.66□□□□□ -0.38
LMO3-215ENST00000537304 WAPLQ7Z5K2 1190 aa12.66□□□□□ -0.38
LMO3-215ENST00000537304 TXNDC2Q86VQ3 553 aa12.66□□□□□ -0.38
LMO3-215ENST00000537304 THEMISQ8N1K5 641 aaPredicted RBP12.66□□□□□ -0.38
LMO3-215ENST00000537304 ZNF396Q96N95 335 aaPredicted RBP12.66□□□□□ -0.38
LMO3-215ENST00000537304 BPIFA3Q9BQP9 254 aa12.66□□□□□ -0.38
LMO3-215ENST00000537304 USP44Q9H0E7 712 aa12.66□□□□□ -0.38
LMO3-215ENST00000537304 SPG7Q9UQ90 795 aa12.66□□□□□ -0.38
LMO3-215ENST00000537304 FHOD1Q9Y613 1164 aa12.66□□□□□ -0.38
LMO3-215ENST00000537304 EID1Q9Y6B2 187 aa12.66□□□□□ -0.38
LMO3-215ENST00000537304 NALCNQ8IZF0 1738 aa12.65□□□□□ -0.38
LMO3-215ENST00000537304 H3BQV1 296 aa12.65□□□□□ -0.38
LMO3-215ENST00000537304 TNNT3P45378 269 aaPredicted RBP12.65□□□□□ -0.38
LMO3-215ENST00000537304 HNRNPH2P55795 449 aaKnown RBP12.65□□□□□ -0.38
LMO3-215ENST00000537304 TSGA10IPQ3SY00 556 aa12.65□□□□□ -0.38
LMO3-215ENST00000537304 CCDC158Q5M9N0 1113 aa12.65□□□□□ -0.38
LMO3-215ENST00000537304 IFFO2Q5TF58 517 aa12.65□□□□□ -0.38
LMO3-215ENST00000537304 FCHSD1Q86WN1 690 aa12.65□□□□□ -0.38
LMO3-215ENST00000537304 GOLGA6L1Q8N7Z2 621 aa12.65□□□□□ -0.38
LMO3-215ENST00000537304 MNS1Q8NEH6 495 aa12.65□□□□□ -0.38
LMO3-215ENST00000537304 LLPHQ9BRT6 129 aaKnown RBP12.65□□□□□ -0.38
LMO3-215ENST00000537304 RASSF4Q9H2L5 321 aa12.65□□□□□ -0.38
LMO3-215ENST00000537304 ZNF446Q9NWS9 450 aa12.65□□□□□ -0.38
LMO3-215ENST00000537304 TPCN1Q9ULQ1 816 aa12.65□□□□□ -0.38
LMO3-215ENST00000537304 RBM8AQ9Y5S9 174 aaKnown RBP12.65□□□□□ -0.38
LMO3-215ENST00000537304 RIMS1Q86UR5 1692 aaKnown RBP12.65□□□□□ -0.38
LMO3-215ENST00000537304 GOLGA6L9A6NEM1 432 aa12.64□□□□□ -0.39
LMO3-215ENST00000537304 EFCAB8A8MWE9 144 aa12.64□□□□□ -0.39
LMO3-215ENST00000537304 SFPQP23246 707 aaKnown RBP eCLIP12.64□□□□□ -0.39
LMO3-215ENST00000537304 RPS6KB1P23443 525 aa12.64□□□□□ -0.39
LMO3-215ENST00000537304 CLCN6P51797 869 aa12.64□□□□□ -0.39
LMO3-215ENST00000537304 NOM1Q5C9Z4 860 aaKnown RBP12.64□□□□□ -0.39
LMO3-215ENST00000537304 TAF7LQ5H9L4 462 aa12.64□□□□□ -0.39
LMO3-215ENST00000537304 FERMT3Q86UX7 667 aa12.64□□□□□ -0.39
LMO3-215ENST00000537304 MAP4K1Q92918 833 aa12.64□□□□□ -0.39
LMO3-215ENST00000537304 NUDT16Q96DE0 195 aaKnown RBP12.64□□□□□ -0.39
LMO3-215ENST00000537304 PSD3Q9NYI0 1048 aa12.64□□□□□ -0.39
LMO3-215ENST00000537304 ADAMTSL3P82987 1691 aa12.64□□□□□ -0.39
LMO3-215ENST00000537304 SRGAP3O43295 1099 aa12.64□□□□□ -0.39
LMO3-215ENST00000537304 MYO1BO43795 1136 aa12.64□□□□□ -0.39
LMO3-215ENST00000537304 ZRANB2O95218 330 aaKnown RBP eCLIP12.64□□□□□ -0.39
LMO3-215ENST00000537304 TUBB4BP68371 445 aa12.64□□□□□ -0.39
LMO3-215ENST00000537304 ST3GAL1Q11201 340 aa12.64□□□□□ -0.39
LMO3-215ENST00000537304 RESTQ13127 1097 aa12.64□□□□□ -0.39
LMO3-215ENST00000537304 OS9Q13438 667 aaPredicted RBP12.64□□□□□ -0.39
LMO3-215ENST00000537304 ARHGAP29Q52LW3 1261 aa12.64□□□□□ -0.39
LMO3-215ENST00000537304 NAA16Q6N069 864 aaPredicted RBP12.64□□□□□ -0.39
LMO3-215ENST00000537304 PPP1R13BQ96KQ4 1090 aa12.64□□□□□ -0.39
LMO3-215ENST00000537304 FEZ2Q9UHY8 353 aaPredicted RBP12.64□□□□□ -0.39
LMO3-215ENST00000537304 DNAI1Q9UI46 699 aa12.64□□□□□ -0.39
LMO3-215ENST00000537304 KDRP35968 1356 aa12.63□□□□□ -0.39
LMO3-215ENST00000537304 OVOS2A0A0J9YW53 1432 aa12.63□□□□□ -0.39
LMO3-215ENST00000537304 OVOS2Q6IE36 1432 aa12.63□□□□□ -0.39
LMO3-215ENST00000537304 USP27XA6NNY8 438 aa12.63□□□□□ -0.39
LMO3-215ENST00000537304 MAP4K4O95819 1239 aaPredicted RBP12.63□□□□□ -0.39
LMO3-215ENST00000537304 ETF1P62495 437 aaKnown RBP12.63□□□□□ -0.39
LMO3-215ENST00000537304 FAM160A1Q05DH4 1040 aa12.63□□□□□ -0.39
LMO3-215ENST00000537304 RAD51AP2Q09MP3 1159 aa12.63□□□□□ -0.39
LMO3-215ENST00000537304 LRRFIP1Q32MZ4 808 aaKnown RBP12.63□□□□□ -0.39
LMO3-215ENST00000537304 NECAB1Q8N987 351 aa12.63□□□□□ -0.39
LMO3-215ENST00000537304 PGBD1Q96JS3 809 aa12.63□□□□□ -0.39
LMO3-215ENST00000537304 RCOR1Q9UKL0 485 aa12.63□□□□□ -0.39
LMO3-215ENST00000537304 USP31Q70CQ4 1352 aa12.63□□□□□ -0.39
LMO3-215ENST00000537304 SLC27A2O14975 620 aa12.62□□□□□ -0.39
LMO3-215ENST00000537304 ZSCAN12O43309 604 aa12.62□□□□□ -0.39
LMO3-215ENST00000537304 HOXB7P09629 217 aa12.62□□□□□ -0.39
LMO3-215ENST00000537304 IFIT2P09913 472 aaKnown RBP12.62□□□□□ -0.39
LMO3-215ENST00000537304 CAPN2P17655 700 aa12.62□□□□□ -0.39
LMO3-215ENST00000537304 PTH1RQ03431 593 aa12.62□□□□□ -0.39
LMO3-215ENST00000537304 MTX1Q13505 466 aa12.62□□□□□ -0.39
LMO3-215ENST00000537304 ERCC6LQ2NKX8 1250 aa12.62□□□□□ -0.39
LMO3-215ENST00000537304 ADCK5Q3MIX3 580 aa12.62□□□□□ -0.39
LMO3-215ENST00000537304 LARP1Q6PKG0 1096 aaKnown RBP12.62□□□□□ -0.39
LMO3-215ENST00000537304 PLPPR3Q6T4P5 718 aa12.62□□□□□ -0.39
LMO3-215ENST00000537304 HOMER1Q86YM7 354 aa12.62□□□□□ -0.39
LMO3-215ENST00000537304 LARP6Q9BRS8 491 aaKnown RBP12.62□□□□□ -0.39
LMO3-215ENST00000537304 YY1AP1Q9H869 796 aa12.62□□□□□ -0.39
LMO3-215ENST00000537304 TRMT1Q9NXH9 659 aaKnown RBP12.62□□□□□ -0.39
LMO3-215ENST00000537304 TFIP11Q9UBB9 837 aaKnown RBP12.62□□□□□ -0.39
LMO3-215ENST00000537304 ORC3Q9UBD5 711 aaPredicted RBP12.62□□□□□ -0.39
LMO3-215ENST00000537304 ERBB3P21860 1342 aa12.62□□□□□ -0.39
LMO3-215ENST00000537304 CEP170BQ9Y4F5 1589 aaPredicted RBP12.62□□□□□ -0.39
LMO3-215ENST00000537304 FMN2Q9NZ56 1722 aa12.62□□□□□ -0.39
LMO3-215ENST00000537304 CBFA2T2O43439 604 aa12.61□□□□□ -0.39
LMO3-215ENST00000537304 IVLP07476 585 aa12.61□□□□□ -0.39
LMO3-215ENST00000537304 CPA1P15085 419 aa12.61□□□□□ -0.39
LMO3-215ENST00000537304 PLA2G4AP47712 749 aa12.61□□□□□ -0.39
LMO3-215ENST00000537304 CCAR1Q8IX12 1150 aaKnown RBP12.61□□□□□ -0.39
LMO3-215ENST00000537304 DHX40Q8IX18 779 aaKnown RBP12.61□□□□□ -0.39
LMO3-215ENST00000537304 GPR161Q8N6U8 529 aaKnown RBP12.61□□□□□ -0.39
LMO3-215ENST00000537304 GOLGA5Q8TBA6 731 aa12.61□□□□□ -0.39
LMO3-215ENST00000537304 EXOC4Q96A65 974 aa12.61□□□□□ -0.39
LMO3-215ENST00000537304 TRIM34Q9BYJ4 488 aa12.61□□□□□ -0.39
LMO3-215ENST00000537304 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.61□□□□□ -0.39
LMO3-215ENST00000537304 TBX22Q9Y458 520 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms