RNA–Protein interactions for RNA: ENST00000534663.1

RAG1-203, Transcript of recombination activating 1, humanhuman

TSL 1 (best)

Gene RAG1, Length 3,707 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-203ENST00000534663 CCAR1Q8IX12 1150 aaKnown RBP8.05□□□□□ -1.12
RAG1-203ENST00000534663 FAM177A1Q8N128 213 aaPredicted RBP8.05□□□□□ -1.12
RAG1-203ENST00000534663 CACTINQ8WUQ7 758 aaKnown RBP8.05□□□□□ -1.12
RAG1-203ENST00000534663 NCOA5Q9HCD5 579 aaKnown RBP8.05□□□□□ -1.12
RAG1-203ENST00000534663 DDX19AQ9NUU7 478 aaKnown RBP8.05□□□□□ -1.12
RAG1-203ENST00000534663 CDC42BPGQ6DT37 1551 aa8.05□□□□□ -1.12
RAG1-203ENST00000534663 GRM8O00222 908 aa8.05□□□□□ -1.12
RAG1-203ENST00000534663 SKILP12757 684 aa8.05□□□□□ -1.12
RAG1-203ENST00000534663 ST3GAL1Q11201 340 aa8.05□□□□□ -1.12
RAG1-203ENST00000534663 NECTIN1Q15223 517 aa8.05□□□□□ -1.12
RAG1-203ENST00000534663 CEP135Q66GS9 1140 aa8.05□□□□□ -1.12
RAG1-203ENST00000534663 NEK1Q96PY6 1258 aa8.05□□□□□ -1.12
RAG1-203ENST00000534663 CGNQ9P2M7 1197 aaKnown RBP8.05□□□□□ -1.12
RAG1-203ENST00000534663 HIP1O00291 1037 aa8.04□□□□□ -1.12
RAG1-203ENST00000534663 POLR3DP05423 398 aaPredicted RBP8.04□□□□□ -1.12
RAG1-203ENST00000534663 RPS6KB1P23443 525 aa8.04□□□□□ -1.12
RAG1-203ENST00000534663 PLEKHO1Q53GL0 409 aaPredicted RBP8.04□□□□□ -1.12
RAG1-203ENST00000534663 HDAC5Q9UQL6 1122 aa8.04□□□□□ -1.12
RAG1-203ENST00000534663 KDM4FA0A1W2PPD8 638 aa8.04□□□□□ -1.12
RAG1-203ENST00000534663 ZSCAN20P17040 1043 aaPredicted RBP8.04□□□□□ -1.12
RAG1-203ENST00000534663 OTUD7BQ6GQQ9 843 aa8.04□□□□□ -1.12
RAG1-203ENST00000534663 KSR2Q6VAB6 950 aa8.04□□□□□ -1.12
RAG1-203ENST00000534663 CCDC85AQ96PX6 553 aaPredicted RBP8.04□□□□□ -1.12
RAG1-203ENST00000534663 SPTLC3Q9NUV7 552 aa8.04□□□□□ -1.12
RAG1-203ENST00000534663 PREX1Q8TCU6 1659 aa8.04□□□□□ -1.12
RAG1-203ENST00000534663 SASH1O94885 1247 aa8.04□□□□□ -1.12
RAG1-203ENST00000534663 APOBRQ0VD83 1088 aa8.04□□□□□ -1.12
RAG1-203ENST00000534663 CCDC144BQ3MJ40 725 aa8.04□□□□□ -1.12
RAG1-203ENST00000534663 UBE3BQ7Z3V4 1068 aa8.04□□□□□ -1.12
RAG1-203ENST00000534663 CCDC144CPQ8IYA2 1237 aa8.04□□□□□ -1.12
RAG1-203ENST00000534663 FUCA2Q9BTY2 467 aa8.04□□□□□ -1.12
RAG1-203ENST00000534663 CFAP45Q9UL16 551 aa8.04□□□□□ -1.12
RAG1-203ENST00000534663 TTC21AQ8NDW8 1320 aa8.04□□□□□ -1.12
RAG1-203ENST00000534663 RIMS1Q86UR5 1692 aaKnown RBP8.04□□□□□ -1.12
RAG1-203ENST00000534663 CSB-PGBD3P0DP91 1061 aa8.03□□□□□ -1.12
RAG1-203ENST00000534663 DMTNQ08495 405 aa8.03□□□□□ -1.12
RAG1-203ENST00000534663 AOPEPQ8N6M6 819 aa8.03□□□□□ -1.12
RAG1-203ENST00000534663 FSIP1Q8NA03 581 aa8.03□□□□□ -1.12
RAG1-203ENST00000534663 MAP4K1Q92918 833 aa8.03□□□□□ -1.12
RAG1-203ENST00000534663 TRERF1Q96PN7 1200 aa8.03□□□□□ -1.12
RAG1-203ENST00000534663 USP27XA6NNY8 438 aa8.03□□□□□ -1.12
RAG1-203ENST00000534663 ZC3H6P61129 1189 aaKnown RBP8.03□□□□□ -1.12
RAG1-203ENST00000534663 HAND2P61296 217 aa8.03□□□□□ -1.12
RAG1-203ENST00000534663 GNL2Q13823 731 aaKnown RBP8.03□□□□□ -1.12
RAG1-203ENST00000534663 HSP90AA4PQ58FG1 418 aa8.03□□□□□ -1.12
RAG1-203ENST00000534663 C11orf57Q6ZUT1 292 aaPredicted RBP8.03□□□□□ -1.12
RAG1-203ENST00000534663 TNRQ92752 1358 aa8.03□□□□□ -1.12
RAG1-203ENST00000534663 PGBD1Q96JS3 809 aa8.03□□□□□ -1.12
RAG1-203ENST00000534663 CHMP4AQ9BY43 222 aa8.03□□□□□ -1.12
RAG1-203ENST00000534663 TMX1Q9H3N1 280 aa8.03□□□□□ -1.12
RAG1-203ENST00000534663 CLSTN2Q9H4D0 955 aa8.03□□□□□ -1.12
RAG1-203ENST00000534663 CEP170BQ9Y4F5 1589 aaPredicted RBP8.03□□□□□ -1.12
RAG1-203ENST00000534663 CCDC69A6NI79 296 aa8.03□□□□□ -1.12
RAG1-203ENST00000534663 GOLIM4O00461 696 aa8.03□□□□□ -1.12
RAG1-203ENST00000534663 KCNA6P17658 529 aa8.03□□□□□ -1.12
RAG1-203ENST00000534663 NLRP2Q9NX02 1062 aa8.03□□□□□ -1.12
RAG1-203ENST00000534663 A0A1B0GVL5 298 aa8.02□□□□□ -1.13
RAG1-203ENST00000534663 NCBP1Q09161 790 aaKnown RBP8.02□□□□□ -1.13
RAG1-203ENST00000534663 TFCP2Q12800 502 aa8.02□□□□□ -1.13
RAG1-203ENST00000534663 PTPN21Q16825 1174 aa8.02□□□□□ -1.13
RAG1-203ENST00000534663 COPS6Q7L5N1 327 aa8.02□□□□□ -1.13
RAG1-203ENST00000534663 TM6SF1Q9BZW5 370 aa8.02□□□□□ -1.13
RAG1-203ENST00000534663 PODXL2Q9NZ53 605 aa8.02□□□□□ -1.13
RAG1-203ENST00000534663 TOB2Q14106 344 aaPredicted RBP8.02□□□□□ -1.13
RAG1-203ENST00000534663 STK38Q15208 465 aa8.02□□□□□ -1.13
RAG1-203ENST00000534663 WASHC4Q2M389 1173 aa8.02□□□□□ -1.13
RAG1-203ENST00000534663 CCAR2Q8N163 923 aaKnown RBP8.02□□□□□ -1.13
RAG1-203ENST00000534663 XAGE3Q8WTP9 111 aa8.02□□□□□ -1.13
RAG1-203ENST00000534663 SNRKQ9NRH2 765 aa8.02□□□□□ -1.13
RAG1-203ENST00000534663 ZNF215Q9UL58 517 aaPredicted RBP8.02□□□□□ -1.13
RAG1-203ENST00000534663 SMTNL1A8MU46 457 aa8.02□□□□□ -1.13
RAG1-203ENST00000534663 NRDCO43847 1150 aa8.02□□□□□ -1.13
RAG1-203ENST00000534663 FKBP4Q02790 459 aaKnown RBP eCLIP8.02□□□□□ -1.13
RAG1-203ENST00000534663 HSP90AB3PQ58FF7 597 aa8.02□□□□□ -1.13
RAG1-203ENST00000534663 CEP57L1Q8IYX8 460 aa8.02□□□□□ -1.13
RAG1-203ENST00000534663 DBNDD2Q9BQY9 259 aa8.02□□□□□ -1.13
RAG1-203ENST00000534663 OVOS2A0A0J9YW53 1432 aa8.01□□□□□ -1.13
RAG1-203ENST00000534663 OVOS2Q6IE36 1432 aa8.01□□□□□ -1.13
RAG1-203ENST00000534663 CPLX1O14810 134 aa8.01□□□□□ -1.13
RAG1-203ENST00000534663 ELF2Q15723 593 aa8.01□□□□□ -1.13
RAG1-203ENST00000534663 TMC6Q7Z403 805 aa8.01□□□□□ -1.13
RAG1-203ENST00000534663 LINS1Q8NG48 757 aa8.01□□□□□ -1.13
RAG1-203ENST00000534663 USP28Q96RU2 1077 aa8.01□□□□□ -1.13
RAG1-203ENST00000534663 PHF8Q9UPP1 1060 aa8.01□□□□□ -1.13
RAG1-203ENST00000534663 TMEM2Q9UHN6 1383 aa8.01□□□□□ -1.13
RAG1-203ENST00000534663 DLC1Q96QB1 1528 aa8.01□□□□□ -1.13
RAG1-203ENST00000534663 PTPDC1A2A3K4 754 aa8.01□□□□□ -1.13
RAG1-203ENST00000534663 TIMM10P62072 90 aa8.01□□□□□ -1.13
RAG1-203ENST00000534663 KRT32Q14532 448 aa8.01□□□□□ -1.13
RAG1-203ENST00000534663 STX1AQ16623 288 aa8.01□□□□□ -1.13
RAG1-203ENST00000534663 TTC5Q8N0Z6 440 aa8.01□□□□□ -1.13
RAG1-203ENST00000534663 A0A087WZG4 1122 aa8□□□□□ -1.13
RAG1-203ENST00000534663 EPB41L2O43491 1005 aaKnown RBP8□□□□□ -1.13
RAG1-203ENST00000534663 GIGYF1O75420 1035 aaPredicted RBP8□□□□□ -1.13
RAG1-203ENST00000534663 TAF5LO75529 589 aa8□□□□□ -1.13
RAG1-203ENST00000534663 ALDH1L1O75891 902 aa8□□□□□ -1.13
RAG1-203ENST00000534663 CYP21A2P08686 494 aa8□□□□□ -1.13
RAG1-203ENST00000534663 CDK11BP21127 795 aaKnown RBP8□□□□□ -1.13
RAG1-203ENST00000534663 GTF2F1P35269 517 aaKnown RBP eCLIP8□□□□□ -1.13
RAG1-203ENST00000534663 SCRN1Q12765 414 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms