RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	FILIP1	Q7Z7B0	1213 aa		18.16	■□□□□ 0.5
NCAPD3-213	ENST00000534532	MAGEB6P1	A0A0J9YX57	407 aa		18.16	■□□□□ 0.5
NCAPD3-213	ENST00000534532	BAG6	P46379	1132 aa		18.16	■□□□□ 0.5
NCAPD3-213	ENST00000534532	UGGT2	Q9NYU1	1516 aa		18.16	■□□□□ 0.5
NCAPD3-213	ENST00000534532	SLAIN2	Q9P270	581 aa		18.16	■□□□□ 0.5
NCAPD3-213	ENST00000534532	ANKRD62	A6NC57	917 aa		18.16	■□□□□ 0.5
NCAPD3-213	ENST00000534532	GNAT2	P19087	354 aa		18.16	■□□□□ 0.5
NCAPD3-213	ENST00000534532	SYCP3	Q8IZU3	236 aa		18.16	■□□□□ 0.5
NCAPD3-213	ENST00000534532	AXDND1	Q5T1B0	1012 aa	Predicted RBP	18.15	■□□□□ 0.5
NCAPD3-213	ENST00000534532	MEIS3	Q99687	375 aa		18.15	■□□□□ 0.5
NCAPD3-213	ENST00000534532	USP21	Q9UK80	565 aa		18.15	■□□□□ 0.5
NCAPD3-213	ENST00000534532	ARHGEF10	O15013	1369 aa		18.15	■□□□□ 0.5
NCAPD3-213	ENST00000534532	ASXL1	Q8IXJ9	1541 aa		18.15	■□□□□ 0.5
NCAPD3-213	ENST00000534532	CTAGE5	O15320	804 aa		18.15	■□□□□ 0.5
NCAPD3-213	ENST00000534532	FAM177A1	Q8N128	213 aa	Predicted RBP	18.15	■□□□□ 0.5
NCAPD3-213	ENST00000534532	IL27	Q8NEV9	243 aa		18.15	■□□□□ 0.5
NCAPD3-213	ENST00000534532	LDHB	P07195	334 aa	Known RBP	18.15	■□□□□ 0.5
NCAPD3-213	ENST00000534532	BMP2KL	Q5H9B9	411 aa		18.15	■□□□□ 0.5
NCAPD3-213	ENST00000534532	TBCA	O75347	108 aa	Known RBP	18.14	■□□□□ 0.49
NCAPD3-213	ENST00000534532	ATP8B2	P98198	1209 aa		18.14	■□□□□ 0.49
NCAPD3-213	ENST00000534532	YTHDC2	Q9H6S0	1430 aa	Known RBP	18.14	■□□□□ 0.49
NCAPD3-213	ENST00000534532	ZBTB43	O43298	467 aa		18.14	■□□□□ 0.49
NCAPD3-213	ENST00000534532	CAMK4	Q16566	473 aa		18.14	■□□□□ 0.49
NCAPD3-213	ENST00000534532	FAM98C	Q17RN3	349 aa	Known RBP	18.14	■□□□□ 0.49
NCAPD3-213	ENST00000534532	MAP3K19	Q56UN5	1328 aa		18.14	■□□□□ 0.49
NCAPD3-213	ENST00000534532	SMARCC2	Q8TAQ2	1214 aa		18.13	■□□□□ 0.49
NCAPD3-213	ENST00000534532	ORAI2	Q96SN7	254 aa		18.13	■□□□□ 0.49
NCAPD3-213	ENST00000534532	MCMDC2	Q4G0Z9	681 aa		18.13	■□□□□ 0.49
NCAPD3-213	ENST00000534532	TTC22	Q5TAA0	569 aa		18.13	■□□□□ 0.49
NCAPD3-213	ENST00000534532	SOS1	Q07889	1333 aa	Predicted RBP	18.13	■□□□□ 0.49
NCAPD3-213	ENST00000534532	KIAA0556	O60303	1618 aa		18.13	■□□□□ 0.49
NCAPD3-213	ENST00000534532	PLS1	Q14651	629 aa		18.13	■□□□□ 0.49
NCAPD3-213	ENST00000534532	C8orf58	Q8NAV2	365 aa		18.13	■□□□□ 0.49
NCAPD3-213	ENST00000534532	GJA3	Q9Y6H8	435 aa		18.13	■□□□□ 0.49
NCAPD3-213	ENST00000534532	ERLIN1	O75477	346 aa		18.12	■□□□□ 0.49
NCAPD3-213	ENST00000534532	ZFYVE9	O95405	1425 aa		18.12	■□□□□ 0.49
NCAPD3-213	ENST00000534532	PRAG1	Q86YV5	1406 aa		18.12	■□□□□ 0.49
NCAPD3-213	ENST00000534532	KLF18	A0A0U1RQI7	1052 aa		18.12	■□□□□ 0.49
NCAPD3-213	ENST00000534532	BMP15	O95972	392 aa		18.12	■□□□□ 0.49
NCAPD3-213	ENST00000534532	FERMT2	Q96AC1	680 aa		18.12	■□□□□ 0.49
NCAPD3-213	ENST00000534532	BICD1	Q96G01	975 aa		18.12	■□□□□ 0.49
NCAPD3-213	ENST00000534532	ANAPC15	P60006	121 aa		18.12	■□□□□ 0.49
NCAPD3-213	ENST00000534532	CCDC40	Q4G0X9	1142 aa		18.12	■□□□□ 0.49
NCAPD3-213	ENST00000534532	TCERG1L	Q5VWI1	586 aa		18.12	■□□□□ 0.49
NCAPD3-213	ENST00000534532	ADAMTS12	P58397	1594 aa		18.12	■□□□□ 0.49
NCAPD3-213	ENST00000534532	MCM9	Q9NXL9	1143 aa		18.12	■□□□□ 0.49
NCAPD3-213	ENST00000534532	RBM27	Q9P2N5	1060 aa	Known RBP	18.12	■□□□□ 0.49
NCAPD3-213	ENST00000534532	RTN1	Q16799	776 aa		18.11	■□□□□ 0.49
NCAPD3-213	ENST00000534532	KANK3	Q6NY19	840 aa		18.11	■□□□□ 0.49
NCAPD3-213	ENST00000534532	CCDC174	Q6PII3	467 aa		18.11	■□□□□ 0.49
NCAPD3-213	ENST00000534532	TTC6	Q86TZ1	520 aa		18.11	■□□□□ 0.49
NCAPD3-213	ENST00000534532	GBP2	P32456	591 aa	Predicted RBP	18.11	■□□□□ 0.49
NCAPD3-213	ENST00000534532	MCM4	P33991	863 aa		18.11	■□□□□ 0.49
NCAPD3-213	ENST00000534532	HELB	Q8NG08	1087 aa	Predicted RBP	18.11	■□□□□ 0.49
NCAPD3-213	ENST00000534532	PPM1F	P49593	454 aa	Predicted RBP	18.11	■□□□□ 0.49
NCAPD3-213	ENST00000534532	FSIP1	Q8NA03	581 aa		18.11	■□□□□ 0.49
NCAPD3-213	ENST00000534532	SH2D4A	Q9H788	454 aa		18.11	■□□□□ 0.49
NCAPD3-213	ENST00000534532	PAG1	Q9NWQ8	432 aa		18.11	■□□□□ 0.49
NCAPD3-213	ENST00000534532	MTIF2	P46199	727 aa	Known RBP	18.1	■□□□□ 0.49
NCAPD3-213	ENST00000534532	CCDC97	Q96F63	343 aa	Predicted RBP	18.1	■□□□□ 0.49
NCAPD3-213	ENST00000534532	DDX21	Q9NR30	783 aa	Known RBP eCLIP	18.1	■□□□□ 0.49
NCAPD3-213	ENST00000534532	SH3TC1	Q8TE82	1336 aa		18.1	■□□□□ 0.49
NCAPD3-213	ENST00000534532	TSHZ3	Q63HK5	1081 aa		18.1	■□□□□ 0.49
NCAPD3-213	ENST00000534532	USP37	Q86T82	979 aa		18.1	■□□□□ 0.49
NCAPD3-213	ENST00000534532	ANKRD44	Q8N8A2	993 aa		18.1	■□□□□ 0.49
NCAPD3-213	ENST00000534532		H0YIN7	160 aa		18.1	■□□□□ 0.49
NCAPD3-213	ENST00000534532	EZR	P15311	586 aa	Known RBP	18.1	■□□□□ 0.49
NCAPD3-213	ENST00000534532	MRPL50	Q8N5N7	158 aa	Known RBP	18.1	■□□□□ 0.49
NCAPD3-213	ENST00000534532	CALM1	P0DP23	149 aa		18.1	■□□□□ 0.49
NCAPD3-213	ENST00000534532	CALM2	P0DP24	149 aa		18.1	■□□□□ 0.49
NCAPD3-213	ENST00000534532	CALM3	P0DP25	149 aa		18.1	■□□□□ 0.49
NCAPD3-213	ENST00000534532	EIF6	P56537	245 aa	Known RBP	18.1	■□□□□ 0.49
NCAPD3-213	ENST00000534532	RAB11FIP4	Q86YS3	637 aa		18.09	■□□□□ 0.49
NCAPD3-213	ENST00000534532	CCDC112	Q8NEF3	446 aa		18.09	■□□□□ 0.49
NCAPD3-213	ENST00000534532	APBA3	O96018	575 aa		18.09	■□□□□ 0.49
NCAPD3-213	ENST00000534532	GJB2	P29033	226 aa		18.09	■□□□□ 0.49
NCAPD3-213	ENST00000534532	HEATR3	Q7Z4Q2	680 aa		18.09	■□□□□ 0.49
NCAPD3-213	ENST00000534532	FAM114A1	Q8IWE2	563 aa		18.09	■□□□□ 0.49
NCAPD3-213	ENST00000534532	BRF1	Q92994	677 aa		18.09	■□□□□ 0.49
NCAPD3-213	ENST00000534532	DENND2A	Q9ULE3	1009 aa		18.09	■□□□□ 0.49
NCAPD3-213	ENST00000534532	RBM25	P49756	843 aa	Known RBP	18.09	■□□□□ 0.49
NCAPD3-213	ENST00000534532	TBC1D9	Q6ZT07	1266 aa		18.09	■□□□□ 0.49
NCAPD3-213	ENST00000534532	C6orf50	Q9HD87	102 aa		18.09	■□□□□ 0.49
NCAPD3-213	ENST00000534532	SFPQ	P23246	707 aa	Known RBP eCLIP	18.09	■□□□□ 0.49
NCAPD3-213	ENST00000534532	POLR3A	O14802	1390 aa	Predicted RBP	18.09	■□□□□ 0.49
NCAPD3-213	ENST00000534532	UFL1	O94874	794 aa		18.09	■□□□□ 0.49
NCAPD3-213	ENST00000534532	CCDC183	Q5T5S1	534 aa		18.08	■□□□□ 0.49
NCAPD3-213	ENST00000534532	CCDC87	Q9NVE4	849 aa		18.08	■□□□□ 0.49
NCAPD3-213	ENST00000534532	NAPA	P54920	295 aa		18.08	■□□□□ 0.48
NCAPD3-213	ENST00000534532	NCBP1	Q09161	790 aa	Known RBP	18.08	■□□□□ 0.48
NCAPD3-213	ENST00000534532	SUPT20H	Q8NEM7	779 aa		18.08	■□□□□ 0.48
NCAPD3-213	ENST00000534532	SPDYE3	A6NKU9	549 aa		18.08	■□□□□ 0.48
NCAPD3-213	ENST00000534532	CA8	P35219	290 aa		18.08	■□□□□ 0.48
NCAPD3-213	ENST00000534532	ENOX2	Q16206	610 aa	Known RBP	18.08	■□□□□ 0.48
NCAPD3-213	ENST00000534532	CWF19L2	Q2TBE0	894 aa	Known RBP	18.08	■□□□□ 0.48
NCAPD3-213	ENST00000534532	TDRD12	Q587J7	1177 aa	Known RBP	18.08	■□□□□ 0.48
NCAPD3-213	ENST00000534532	CCDC191	Q8NCU4	936 aa		18.08	■□□□□ 0.48
NCAPD3-213	ENST00000534532	BIN2	Q9UBW5	565 aa	Predicted RBP	18.08	■□□□□ 0.48
NCAPD3-213	ENST00000534532	PDE6B	P35913	854 aa		18.07	■□□□□ 0.48
NCAPD3-213	ENST00000534532	ZNF790	Q6PG37	636 aa		18.07	■□□□□ 0.48

Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms