RNA–Protein interactions for RNA: ENST00000533756.5

PACS1-213, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-213ENST00000533756 SULT6B1Q6IMI4 303 aa12.3□□□□□ -0.44
PACS1-213ENST00000533756 OTOP1Q7RTM1 612 aa12.3□□□□□ -0.44
PACS1-213ENST00000533756 RPGRQ92834 1020 aaKnown RBP12.3□□□□□ -0.44
PACS1-213ENST00000533756 ZNF496Q96IT1 587 aaPredicted RBP12.3□□□□□ -0.44
PACS1-213ENST00000533756 CRAMP1Q96RY5 1269 aa12.3□□□□□ -0.44
PACS1-213ENST00000533756 RTFDC1Q9BY42 306 aaPredicted RBP12.3□□□□□ -0.44
PACS1-213ENST00000533756 PRO3102Q9H379 93 aa12.3□□□□□ -0.44
PACS1-213ENST00000533756 BRCA2P51587 3418 aa12.29□□□□□ -0.44
PACS1-213ENST00000533756 A0A1W2PPC1 479 aa12.29□□□□□ -0.44
PACS1-213ENST00000533756 SHTN1A0MZ66 631 aa12.29□□□□□ -0.44
PACS1-213ENST00000533756 RAD17O75943 681 aa12.29□□□□□ -0.44
PACS1-213ENST00000533756 TNNT2P45379 298 aaPredicted RBP12.29□□□□□ -0.44
PACS1-213ENST00000533756 NEUROD1Q13562 356 aa12.29□□□□□ -0.44
PACS1-213ENST00000533756 SAMD7Q7Z3H4 446 aa12.29□□□□□ -0.44
PACS1-213ENST00000533756 SULF1Q8IWU6 871 aa12.29□□□□□ -0.44
PACS1-213ENST00000533756 PTPN22Q9Y2R2 807 aa12.29□□□□□ -0.44
PACS1-213ENST00000533756 HTTP42858 3142 aa12.28□□□□□ -0.44
PACS1-213ENST00000533756 PPEF1O14829 653 aaPredicted RBP12.28□□□□□ -0.44
PACS1-213ENST00000533756 KIAA2012Q0VF49 1180 aa12.28□□□□□ -0.44
PACS1-213ENST00000533756 SREBF2Q12772 1141 aa12.28□□□□□ -0.44
PACS1-213ENST00000533756 CDCA8Q53HL2 280 aa12.28□□□□□ -0.44
PACS1-213ENST00000533756 ANKRD13DQ6ZTN6 518 aa12.28□□□□□ -0.44
PACS1-213ENST00000533756 CDCA5Q96FF9 252 aa12.28□□□□□ -0.44
PACS1-213ENST00000533756 RBM17Q96I25 401 aaKnown RBP12.28□□□□□ -0.44
PACS1-213ENST00000533756 FAM177BA6PVY3 158 aa12.27□□□□□ -0.45
PACS1-213ENST00000533756 ALDH1A1P00352 501 aa12.27□□□□□ -0.45
PACS1-213ENST00000533756 TBC1D10BQ4KMP7 808 aaPredicted RBP12.27□□□□□ -0.45
PACS1-213ENST00000533756 ZNF790Q6PG37 636 aa12.27□□□□□ -0.45
PACS1-213ENST00000533756 NYXQ9GZU5 481 aa12.27□□□□□ -0.45
PACS1-213ENST00000533756 R3HDMLQ9H3Y0 253 aa12.27□□□□□ -0.45
PACS1-213ENST00000533756 PRDM6Q9NQX0 595 aa12.27□□□□□ -0.45
PACS1-213ENST00000533756 ATP6V0A2Q9Y487 856 aa12.27□□□□□ -0.45
PACS1-213ENST00000533756 RIC1Q4ADV7 1423 aa12.27□□□□□ -0.45
PACS1-213ENST00000533756 CENPFP49454 3210 aa12.26□□□□□ -0.45
PACS1-213ENST00000533756 RANBP2P49792 3224 aaKnown RBP12.26□□□□□ -0.45
PACS1-213ENST00000533756 PRAMEF22A3QJZ6 481 aa12.26□□□□□ -0.45
PACS1-213ENST00000533756 TCERG1O14776 1098 aaKnown RBP12.26□□□□□ -0.45
PACS1-213ENST00000533756 EGFRP00533 1210 aa12.25□□□□□ -0.45
PACS1-213ENST00000533756 GPR153Q6NV75 609 aa12.25□□□□□ -0.45
PACS1-213ENST00000533756 FMNL2Q96PY5 1086 aa12.25□□□□□ -0.45
PACS1-213ENST00000533756 STXBP5LQ9Y2K9 1186 aa12.25□□□□□ -0.45
PACS1-213ENST00000533756 KIAA0100Q14667 2235 aaKnown RBP12.25□□□□□ -0.45
PACS1-213ENST00000533756 RPS12P25398 132 aaKnown RBP12.24□□□□□ -0.45
PACS1-213ENST00000533756 ERO1AQ96HE7 468 aa12.24□□□□□ -0.45
PACS1-213ENST00000533756 ZNF333Q96JL9 665 aa12.24□□□□□ -0.45
PACS1-213ENST00000533756 YDJCA8MPS7 323 aa12.23□□□□□ -0.45
PACS1-213ENST00000533756 RBM26Q5T8P6 1007 aaKnown RBP12.23□□□□□ -0.45
PACS1-213ENST00000533756 DPP8Q6V1X1 898 aaPredicted RBP12.23□□□□□ -0.45
PACS1-213ENST00000533756 NBPF11Q86T75 865 aa12.23□□□□□ -0.45
PACS1-213ENST00000533756 SLC51AQ86UW1 340 aa12.23□□□□□ -0.45
PACS1-213ENST00000533756 DPF3Q92784 378 aa12.23□□□□□ -0.45
PACS1-213ENST00000533756 POLR2AP24928 1970 aaKnown RBP12.23□□□□□ -0.45
PACS1-213ENST00000533756 ABCC12Q96J65 1359 aa12.22□□□□□ -0.45
PACS1-213ENST00000533756 UNC80Q8N2C7 3258 aa12.22□□□□□ -0.45
PACS1-213ENST00000533756 SOX1O00570 391 aaPredicted RBP12.22□□□□□ -0.45
PACS1-213ENST00000533756 INHBEP58166 350 aa12.22□□□□□ -0.45
PACS1-213ENST00000533756 NUTM1Q86Y26 1132 aa12.22□□□□□ -0.45
PACS1-213ENST00000533756 LRCH3Q96II8 777 aa12.22□□□□□ -0.45
PACS1-213ENST00000533756 EFCC1Q9HA90 598 aa12.22□□□□□ -0.45
PACS1-213ENST00000533756 GGA3Q9NZ52 723 aa12.22□□□□□ -0.45
PACS1-213ENST00000533756 CEP290O15078 2479 aa12.22□□□□□ -0.45
PACS1-213ENST00000533756 UBE2Q2LH0YL09 131 aa12.21□□□□□ -0.45
PACS1-213ENST00000533756 PSMD14O00487 310 aa12.21□□□□□ -0.45
PACS1-213ENST00000533756 TEFQ10587 303 aa12.21□□□□□ -0.45
PACS1-213ENST00000533756 KIF4BQ2VIQ3 1234 aa12.21□□□□□ -0.45
PACS1-213ENST00000533756 SLC4A8Q2Y0W8 1093 aa12.21□□□□□ -0.45
PACS1-213ENST00000533756 SP8Q8IXZ3 490 aa12.21□□□□□ -0.45
PACS1-213ENST00000533756 MPNDQ8N594 471 aa12.21□□□□□ -0.45
PACS1-213ENST00000533756 USP16Q9Y5T5 823 aa12.21□□□□□ -0.45
PACS1-213ENST00000533756 BBOX1O75936 387 aa12.2□□□□□ -0.46
PACS1-213ENST00000533756 HLFQ16534 295 aa12.2□□□□□ -0.46
PACS1-213ENST00000533756 MTHFSDQ2M296 383 aaKnown RBP12.2□□□□□ -0.46
PACS1-213ENST00000533756 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.2□□□□□ -0.46
PACS1-213ENST00000533756 IL13P35225 146 aa12.19□□□□□ -0.46
PACS1-213ENST00000533756 PIP4K2AP48426 406 aaPredicted RBP12.19□□□□□ -0.46
PACS1-213ENST00000533756 MOB2Q70IA6 237 aa12.19□□□□□ -0.46
PACS1-213ENST00000533756 NR2E3Q9Y5X4 410 aa12.19□□□□□ -0.46
PACS1-213ENST00000533756 IBTKQ9P2D0 1353 aaPredicted RBP12.18□□□□□ -0.46
PACS1-213ENST00000533756 ERBB4Q15303 1308 aa12.18□□□□□ -0.46
PACS1-213ENST00000533756 TCIRG1Q13488 830 aa12.18□□□□□ -0.46
PACS1-213ENST00000533756 DEFB123Q8N688 67 aa12.18□□□□□ -0.46
PACS1-213ENST00000533756 CD99L2Q8TCZ2 262 aa12.18□□□□□ -0.46
PACS1-213ENST00000533756 NLRP3Q96P20 1036 aa12.18□□□□□ -0.46
PACS1-213ENST00000533756 ZNF609O15014 1411 aa12.18□□□□□ -0.46
PACS1-213ENST00000533756 ASTN2O75129 1339 aaPredicted RBP12.17□□□□□ -0.46
PACS1-213ENST00000533756 WTIPA6NIX2 430 aaPredicted RBP12.17□□□□□ -0.46
PACS1-213ENST00000533756 COL9A1P20849 921 aa12.17□□□□□ -0.46
PACS1-213ENST00000533756 MKRN3Q13064 507 aaKnown RBP12.17□□□□□ -0.46
PACS1-213ENST00000533756 ARHGEF6Q15052 776 aa12.17□□□□□ -0.46
PACS1-213ENST00000533756 SLC9C1Q4G0N8 1177 aa12.17□□□□□ -0.46
PACS1-213ENST00000533756 ANGEL2Q5VTE6 544 aaKnown RBP12.17□□□□□ -0.46
PACS1-213ENST00000533756 IFNL1Q8IU54 200 aa12.17□□□□□ -0.46
PACS1-213ENST00000533756 NECTIN2Q92692 538 aa12.17□□□□□ -0.46
PACS1-213ENST00000533756 HTATIP2Q9BUP3 242 aa12.17□□□□□ -0.46
PACS1-213ENST00000533756 MANSC4A6NHS7 340 aaPredicted RBP12.16□□□□□ -0.46
PACS1-213ENST00000533756 ERVV-1B6SEH8 477 aa12.16□□□□□ -0.46
PACS1-213ENST00000533756 SCARF1Q14162 830 aa12.16□□□□□ -0.46
PACS1-213ENST00000533756 IL17REQ8NFR9 667 aa12.16□□□□□ -0.46
PACS1-213ENST00000533756 LAMA3Q16787 3333 aa12.15□□□□□ -0.46
PACS1-213ENST00000533756 NBPF26B4DH59 902 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms