RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 SHANK3Q9BYB0 1731 aa6.52□□□□□ -1.36
CKAP5-212ENST00000533413 NRDCO43847 1150 aa6.52□□□□□ -1.37
CKAP5-212ENST00000533413 PPP4CP60510 307 aa6.52□□□□□ -1.37
CKAP5-212ENST00000533413 EXOSC9Q06265 439 aaKnown RBP6.52□□□□□ -1.37
CKAP5-212ENST00000533413 PTPROQ16827 1216 aa6.52□□□□□ -1.37
CKAP5-212ENST00000533413 ATF7IPQ6VMQ6 1270 aa6.52□□□□□ -1.37
CKAP5-212ENST00000533413 TOM1L2Q6ZVM7 507 aa6.52□□□□□ -1.37
CKAP5-212ENST00000533413 TSR2Q969E8 191 aaKnown RBP6.52□□□□□ -1.37
CKAP5-212ENST00000533413 ZNF330Q9Y3S2 320 aaPredicted RBP6.52□□□□□ -1.37
CKAP5-212ENST00000533413 CSB-PGBD3P0DP91 1061 aa6.52□□□□□ -1.37
CKAP5-212ENST00000533413 LIG1P18858 919 aa6.52□□□□□ -1.37
CKAP5-212ENST00000533413 IGBP1P78318 339 aa6.52□□□□□ -1.37
CKAP5-212ENST00000533413 LARP1Q6PKG0 1096 aaKnown RBP6.52□□□□□ -1.37
CKAP5-212ENST00000533413 AMOTL1Q8IY63 956 aa6.52□□□□□ -1.37
CKAP5-212ENST00000533413 MSL3Q8N5Y2 521 aaKnown RBP6.52□□□□□ -1.37
CKAP5-212ENST00000533413 CEP120Q8N960 986 aa6.52□□□□□ -1.37
CKAP5-212ENST00000533413 PIK3R5Q8WYR1 880 aa6.52□□□□□ -1.37
CKAP5-212ENST00000533413 SNX21Q969T3 373 aa6.52□□□□□ -1.37
CKAP5-212ENST00000533413 OVOS2A0A0G2JMS6 1433 aa6.51□□□□□ -1.37
CKAP5-212ENST00000533413 TRIM27P14373 513 aa6.51□□□□□ -1.37
CKAP5-212ENST00000533413 PUS10Q3MIT2 529 aaKnown RBP6.51□□□□□ -1.37
CKAP5-212ENST00000533413 SEPT12Q8IYM1 358 aa6.51□□□□□ -1.37
CKAP5-212ENST00000533413 TNPO1Q92973 898 aaKnown RBP6.51□□□□□ -1.37
CKAP5-212ENST00000533413 PPP1R9BQ96SB3 815 aa6.51□□□□□ -1.37
CKAP5-212ENST00000533413 CCDC94Q9BW85 323 aaPredicted RBP6.51□□□□□ -1.37
CKAP5-212ENST00000533413 NOB1Q9ULX3 412 aaKnown RBP6.51□□□□□ -1.37
CKAP5-212ENST00000533413 DYNC1I1O14576 645 aa6.51□□□□□ -1.37
CKAP5-212ENST00000533413 HOXA2O43364 376 aa6.51□□□□□ -1.37
CKAP5-212ENST00000533413 CALRP27797 417 aaKnown RBP6.51□□□□□ -1.37
CKAP5-212ENST00000533413 KRT27Q7Z3Y8 459 aa6.51□□□□□ -1.37
CKAP5-212ENST00000533413 SSH1Q8WYL5 1049 aa6.51□□□□□ -1.37
CKAP5-212ENST00000533413 RPS6KC1Q96S38 1066 aa6.51□□□□□ -1.37
CKAP5-212ENST00000533413 AXIN2Q9Y2T1 843 aa6.51□□□□□ -1.37
CKAP5-212ENST00000533413 EGFLAMQ63HQ2 1017 aa6.51□□□□□ -1.37
CKAP5-212ENST00000533413 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.51□□□□□ -1.37
CKAP5-212ENST00000533413 CCDC85AQ96PX6 553 aaPredicted RBP6.51□□□□□ -1.37
CKAP5-212ENST00000533413 NUB1Q9Y5A7 615 aa6.51□□□□□ -1.37
CKAP5-212ENST00000533413 KIF16BQ96L93 1317 aa6.5□□□□□ -1.37
CKAP5-212ENST00000533413 FAM98CQ17RN3 349 aaKnown RBP6.5□□□□□ -1.37
CKAP5-212ENST00000533413 TMEM57Q8N5G2 664 aa6.5□□□□□ -1.37
CKAP5-212ENST00000533413 C1orf131Q8NDD1 294 aaKnown RBP6.5□□□□□ -1.37
CKAP5-212ENST00000533413 ZCRB1Q8TBF4 217 aaKnown RBP6.5□□□□□ -1.37
CKAP5-212ENST00000533413 RREB1Q92766 1687 aa6.5□□□□□ -1.37
CKAP5-212ENST00000533413 IL2RBP14784 551 aa6.5□□□□□ -1.37
CKAP5-212ENST00000533413 BIRC2Q13490 618 aa6.5□□□□□ -1.37
CKAP5-212ENST00000533413 LRRC27Q9C0I9 530 aa6.5□□□□□ -1.37
CKAP5-212ENST00000533413 PIF1Q9H611 641 aa6.5□□□□□ -1.37
CKAP5-212ENST00000533413 ZHX1Q9UKY1 873 aaPredicted RBP6.5□□□□□ -1.37
CKAP5-212ENST00000533413 TMPOP42166 694 aaKnown RBP6.49□□□□□ -1.37
CKAP5-212ENST00000533413 NUCB1Q02818 461 aa6.49□□□□□ -1.37
CKAP5-212ENST00000533413 HS1BP3Q53T59 392 aa6.49□□□□□ -1.37
CKAP5-212ENST00000533413 HSP90AB3PQ58FF7 597 aa6.49□□□□□ -1.37
CKAP5-212ENST00000533413 ANKRD45Q5TZF3 282 aa6.49□□□□□ -1.37
CKAP5-212ENST00000533413 CHD1LQ86WJ1 897 aa6.49□□□□□ -1.37
CKAP5-212ENST00000533413 DHX38Q92620 1227 aaKnown RBP6.49□□□□□ -1.37
CKAP5-212ENST00000533413 NEUROD6Q96NK8 337 aa6.49□□□□□ -1.37
CKAP5-212ENST00000533413 POLKQ9UBT6 870 aa6.49□□□□□ -1.37
CKAP5-212ENST00000533413 IBTKQ9P2D0 1353 aaPredicted RBP6.49□□□□□ -1.37
CKAP5-212ENST00000533413 TDO2P48775 406 aa6.49□□□□□ -1.37
CKAP5-212ENST00000533413 RAB3GAP1Q15042 981 aa6.49□□□□□ -1.37
CKAP5-212ENST00000533413 FAM196AQ6ZSG2 479 aa6.49□□□□□ -1.37
CKAP5-212ENST00000533413 COL3A1P02461 1466 aaPredicted RBP6.49□□□□□ -1.37
CKAP5-212ENST00000533413 MSNP26038 577 aaKnown RBP6.48□□□□□ -1.37
CKAP5-212ENST00000533413 CCDC173Q0VFZ6 552 aa6.48□□□□□ -1.37
CKAP5-212ENST00000533413 RRS1Q15050 365 aaKnown RBP6.48□□□□□ -1.37
CKAP5-212ENST00000533413 TCEAL1Q15170 157 aa6.48□□□□□ -1.37
CKAP5-212ENST00000533413 DDB1Q16531 1140 aa6.48□□□□□ -1.37
CKAP5-212ENST00000533413 ZBTB40Q9NUA8 1239 aa6.48□□□□□ -1.37
CKAP5-212ENST00000533413 NLRP2Q9NX02 1062 aa6.48□□□□□ -1.37
CKAP5-212ENST00000533413 IL16Q14005 1332 aa6.48□□□□□ -1.37
CKAP5-212ENST00000533413 DOT1LQ8TEK3 1739 aa6.48□□□□□ -1.37
CKAP5-212ENST00000533413 POM121CA8CG34 1229 aa6.48□□□□□ -1.37
CKAP5-212ENST00000533413 HMGB1P1B2RPK0 211 aaPredicted RBP6.48□□□□□ -1.37
CKAP5-212ENST00000533413 K7ELQ4 463 aaPredicted RBP6.48□□□□□ -1.37
CKAP5-212ENST00000533413 HMGB2P26583 209 aaKnown RBP6.48□□□□□ -1.37
CKAP5-212ENST00000533413 NASPP49321 788 aaPredicted RBP6.48□□□□□ -1.37
CKAP5-212ENST00000533413 NEXNQ0ZGT2 675 aa6.48□□□□□ -1.37
CKAP5-212ENST00000533413 BMP2KLQ5H9B9 411 aa6.48□□□□□ -1.37
CKAP5-212ENST00000533413 DDX49Q9Y6V7 483 aaKnown RBP6.48□□□□□ -1.37
CKAP5-212ENST00000533413 A0A0G2JS52 829 aa6.48□□□□□ -1.37
CKAP5-212ENST00000533413 TBX4P57082 545 aa6.48□□□□□ -1.37
CKAP5-212ENST00000533413 KCNB2Q92953 911 aa6.48□□□□□ -1.37
CKAP5-212ENST00000533413 GCC1Q96CN9 775 aa6.48□□□□□ -1.37
CKAP5-212ENST00000533413 EMILIN1Q9Y6C2 1016 aa6.48□□□□□ -1.37
CKAP5-212ENST00000533413 IGSF1Q8N6C5 1336 aa6.48□□□□□ -1.37
CKAP5-212ENST00000533413 TATP17735 454 aaPredicted RBP6.47□□□□□ -1.37
CKAP5-212ENST00000533413 LMNB1P20700 586 aa6.47□□□□□ -1.37
CKAP5-212ENST00000533413 ZSCAN30Q86W11 494 aa6.47□□□□□ -1.37
CKAP5-212ENST00000533413 GAS2L3Q86XJ1 694 aa6.47□□□□□ -1.37
CKAP5-212ENST00000533413 UPF1Q92900 1129 aaKnown RBP eCLIP6.47□□□□□ -1.37
CKAP5-212ENST00000533413 DIS3Q9Y2L1 958 aaKnown RBP6.47□□□□□ -1.37
CKAP5-212ENST00000533413 MEGF6O75095 1541 aa6.47□□□□□ -1.37
CKAP5-212ENST00000533413 DDIT3P35638 169 aa6.47□□□□□ -1.37
CKAP5-212ENST00000533413 MTA1Q13330 715 aa6.47□□□□□ -1.37
CKAP5-212ENST00000533413 SF3B2Q13435 895 aaKnown RBP6.47□□□□□ -1.37
CKAP5-212ENST00000533413 ALDH1L2Q3SY69 923 aa6.47□□□□□ -1.37
CKAP5-212ENST00000533413 ENOX1Q8TC92 643 aaKnown RBP6.47□□□□□ -1.37
CKAP5-212ENST00000533413 RAPGEF4Q8WZA2 1011 aa6.47□□□□□ -1.37
CKAP5-212ENST00000533413 IRF2BPLQ9H1B7 796 aa6.47□□□□□ -1.37
CKAP5-212ENST00000533413 IQSEC3Q9UPP2 1182 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms