RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 XYLBO75191 536 aa9.2□□□□□ -0.94
USP47-209ENST00000530041 PCSK7Q16549 785 aa9.2□□□□□ -0.94
USP47-209ENST00000530041 C20orf204Q6ZNR8 217 aa9.2□□□□□ -0.94
USP47-209ENST00000530041 TRIM11Q96F44 468 aa9.2□□□□□ -0.94
USP47-209ENST00000530041 FAM13BQ9NYF5 915 aa9.2□□□□□ -0.94
USP47-209ENST00000530041 RARAP10276 462 aa9.19□□□□□ -0.94
USP47-209ENST00000530041 PLA2G4EQ3MJ16 856 aa9.19□□□□□ -0.94
USP47-209ENST00000530041 DHX32Q7L7V1 743 aaKnown RBP9.19□□□□□ -0.94
USP47-209ENST00000530041 ABTB2Q8N961 1025 aa9.19□□□□□ -0.94
USP47-209ENST00000530041 PLVAPQ9BX97 442 aa9.19□□□□□ -0.94
USP47-209ENST00000530041 KRBA1A5PL33 1030 aa9.18□□□□□ -0.94
USP47-209ENST00000530041 IGHA1P01876 353 aa9.18□□□□□ -0.94
USP47-209ENST00000530041 ZAP70P43403 619 aa9.18□□□□□ -0.94
USP47-209ENST00000530041 COL9A3Q14050 684 aaPredicted RBP9.18□□□□□ -0.94
USP47-209ENST00000530041 GPAT2Q6NUI2 795 aa9.18□□□□□ -0.94
USP47-209ENST00000530041 C8orf86Q6ZUL3 223 aa9.18□□□□□ -0.94
USP47-209ENST00000530041 PIK3R5Q8WYR1 880 aa9.18□□□□□ -0.94
USP47-209ENST00000530041 LILRB5O75023 590 aa9.17□□□□□ -0.94
USP47-209ENST00000530041 SCNN1AP37088 669 aa9.17□□□□□ -0.94
USP47-209ENST00000530041 TRPM4Q8TD43 1214 aa9.17□□□□□ -0.94
USP47-209ENST00000530041 HELQQ8TDG4 1101 aa9.17□□□□□ -0.94
USP47-209ENST00000530041 ARID3AQ99856 593 aa9.17□□□□□ -0.94
USP47-209ENST00000530041 USTQ9Y2C2 406 aa9.17□□□□□ -0.94
USP47-209ENST00000530041 CARNS1A5YM72 827 aa9.16□□□□□ -0.94
USP47-209ENST00000530041 SPDYE3A6NKU9 549 aa9.16□□□□□ -0.94
USP47-209ENST00000530041 ZBTB42B2RXF5 422 aa9.16□□□□□ -0.94
USP47-209ENST00000530041 ZBTB39O15060 712 aa9.16□□□□□ -0.94
USP47-209ENST00000530041 ITGB2P05107 769 aa9.16□□□□□ -0.94
USP47-209ENST00000530041 ARID4AP29374 1257 aaPredicted RBP9.16□□□□□ -0.94
USP47-209ENST00000530041 TRIP4Q15650 581 aaPredicted RBP9.16□□□□□ -0.94
USP47-209ENST00000530041 TLR7Q9NYK1 1049 aaKnown RBP9.16□□□□□ -0.94
USP47-209ENST00000530041 NAGPAQ9UK23 515 aa9.16□□□□□ -0.94
USP47-209ENST00000530041 NID1P14543 1247 aa9.15□□□□□ -0.94
USP47-209ENST00000530041 GPLD1P80108 840 aa9.15□□□□□ -0.94
USP47-209ENST00000530041 PHLDB3Q6NSJ2 640 aa9.15□□□□□ -0.94
USP47-209ENST00000530041 PSAPL1Q6NUJ1 521 aa9.15□□□□□ -0.94
USP47-209ENST00000530041 FAM35AQ86V20 835 aa9.15□□□□□ -0.94
USP47-209ENST00000530041 NRLP54845 237 aa9.14□□□□□ -0.95
USP47-209ENST00000530041 NLRP13Q86W25 1043 aa9.14□□□□□ -0.95
USP47-209ENST00000530041 GPR152Q8TDT2 470 aa9.14□□□□□ -0.95
USP47-209ENST00000530041 GTF3C2Q8WUA4 911 aaPredicted RBP9.14□□□□□ -0.95
USP47-209ENST00000530041 JPH1Q9HDC5 661 aaPredicted RBP9.14□□□□□ -0.95
USP47-209ENST00000530041 FNDC3AQ9Y2H6 1198 aaKnown RBP9.14□□□□□ -0.95
USP47-209ENST00000530041 UBAP1LF5GYI3 381 aa9.13□□□□□ -0.95
USP47-209ENST00000530041 SPATA31C1P0DKV0 1188 aa9.13□□□□□ -0.95
USP47-209ENST00000530041 CPB1P15086 417 aa9.13□□□□□ -0.95
USP47-209ENST00000530041 NUDT8Q8WV74 236 aa9.13□□□□□ -0.95
USP47-209ENST00000530041 FRRS1LQ9P0K9 344 aa9.13□□□□□ -0.95
USP47-209ENST00000530041 MSTNO14793 375 aa9.12□□□□□ -0.95
USP47-209ENST00000530041 MMP20O60882 483 aa9.12□□□□□ -0.95
USP47-209ENST00000530041 RGS9O75916 674 aaPredicted RBP9.12□□□□□ -0.95
USP47-209ENST00000530041 PSAPP07602 524 aa9.12□□□□□ -0.95
USP47-209ENST00000530041 SOX18P35713 384 aa9.12□□□□□ -0.95
USP47-209ENST00000530041 MLLT1Q03111 559 aaPredicted RBP9.12□□□□□ -0.95
USP47-209ENST00000530041 PLAURQ03405 335 aa9.12□□□□□ -0.95
USP47-209ENST00000530041 MTMR7Q9Y216 660 aa9.12□□□□□ -0.95
USP47-209ENST00000530041 HOXD8P13378 290 aaPredicted RBP9.11□□□□□ -0.95
USP47-209ENST00000530041 AFF1P51825 1210 aaKnown RBP9.11□□□□□ -0.95
USP47-209ENST00000530041 PRRT3Q5FWE3 981 aa9.11□□□□□ -0.95
USP47-209ENST00000530041 PERM1Q5SV97 790 aa9.11□□□□□ -0.95
USP47-209ENST00000530041 SPOCK3Q9BQ16 436 aa9.11□□□□□ -0.95
USP47-209ENST00000530041 LPIN3Q9BQK8 851 aa9.11□□□□□ -0.95
USP47-209ENST00000530041 NOM1Q5C9Z4 860 aaKnown RBP9.1□□□□□ -0.95
USP47-209ENST00000530041 B4GALNT3Q6L9W6 998 aa9.1□□□□□ -0.95
USP47-209ENST00000530041 ELMSAN1Q6PJG2 1045 aa9.1□□□□□ -0.95
USP47-209ENST00000530041 ATCAYQ86WG3 371 aa9.1□□□□□ -0.95
USP47-209ENST00000530041 TTC9Q92623 222 aa9.1□□□□□ -0.95
USP47-209ENST00000530041 LOC102724428A0A0B4J2F2 783 aa9.09□□□□□ -0.95
USP47-209ENST00000530041 PROCP04070 461 aa9.09□□□□□ -0.95
USP47-209ENST00000530041 MPSTP25325 297 aa9.09□□□□□ -0.95
USP47-209ENST00000530041 SIK1P57059 783 aa9.09□□□□□ -0.95
USP47-209ENST00000530041 TRIM28Q13263 835 aaKnown RBP9.09□□□□□ -0.95
USP47-209ENST00000530041 TRAPPC3LQ5T215 181 aa9.09□□□□□ -0.95
USP47-209ENST00000530041 HFE2Q6ZVN8 426 aa9.09□□□□□ -0.95
USP47-209ENST00000530041 NUDT16Q96DE0 195 aaKnown RBP9.09□□□□□ -0.95
USP47-209ENST00000530041 C1QTNF9BB2RNN3 333 aa9.08□□□□□ -0.96
USP47-209ENST00000530041 RPLP1P05386 114 aaKnown RBP9.08□□□□□ -0.96
USP47-209ENST00000530041 NPR3P17342 541 aa9.08□□□□□ -0.96
USP47-209ENST00000530041 EIF1AXP47813 144 aaKnown RBP9.08□□□□□ -0.96
USP47-209ENST00000530041 GRIK5Q16478 980 aa9.08□□□□□ -0.96
USP47-209ENST00000530041 CD163Q86VB7 1156 aa9.08□□□□□ -0.96
USP47-209ENST00000530041 OR13H1Q8NG92 308 aa9.08□□□□□ -0.96
USP47-209ENST00000530041 FAM229AH3BQW9 127 aa9.07□□□□□ -0.96
USP47-209ENST00000530041 EIF2AK2P19525 551 aaKnown RBP9.07□□□□□ -0.96
USP47-209ENST00000530041 CHRNA4P43681 627 aa9.07□□□□□ -0.96
USP47-209ENST00000530041 MTMR3Q13615 1198 aa9.07□□□□□ -0.96
USP47-209ENST00000530041 PDE12Q6L8Q7 609 aaKnown RBP9.07□□□□□ -0.96
USP47-209ENST00000530041 ALKBH2Q6NS38 261 aa9.07□□□□□ -0.96
USP47-209ENST00000530041 ILDR2Q71H61 639 aa9.07□□□□□ -0.96
USP47-209ENST00000530041 EDEM1Q92611 657 aa9.07□□□□□ -0.96
USP47-209ENST00000530041 NSUN5Q96P11 429 aaKnown RBP9.07□□□□□ -0.96
USP47-209ENST00000530041 SMG9Q9H0W8 520 aaKnown RBP9.07□□□□□ -0.96
USP47-209ENST00000530041 A0A0A0MRY4 1105 aa9.06□□□□□ -0.96
USP47-209ENST00000530041 J3QW42 95 aa9.06□□□□□ -0.96
USP47-209ENST00000530041 GHRHP01286 108 aa9.06□□□□□ -0.96
USP47-209ENST00000530041 DNM1Q05193 864 aaKnown RBP9.06□□□□□ -0.96
USP47-209ENST00000530041 SF3B2Q13435 895 aaKnown RBP9.06□□□□□ -0.96
USP47-209ENST00000530041 TTC39BQ5VTQ0 682 aaPredicted RBP9.06□□□□□ -0.96
USP47-209ENST00000530041 MSL1Q68DK7 614 aa9.06□□□□□ -0.96
USP47-209ENST00000530041 RETREG2Q8NC44 543 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms