RNA–Protein interactions for RNA: ENST00000529552.5

FGFR1-233, Transcript of fibroblast growth factor receptor 1, human

TSL 4

Gene FGFR1, Length 688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-233	ENST00000529552	ABT1	Q9ULW3	272 aa	Known RBP	12	□□□□□ -0.49
FGFR1-233	ENST00000529552	LAMB2	P55268	1798 aa		12	□□□□□ -0.49
FGFR1-233	ENST00000529552	TCERG1	O14776	1098 aa	Known RBP	11.99	□□□□□ -0.49
FGFR1-233	ENST00000529552	FOXN1	O15353	648 aa		11.99	□□□□□ -0.49
FGFR1-233	ENST00000529552	PPIP5K2	O43314	1243 aa		11.99	□□□□□ -0.49
FGFR1-233	ENST00000529552	EIF2S2	P20042	333 aa	Known RBP	11.99	□□□□□ -0.49
FGFR1-233	ENST00000529552	VEGFB	P49765	207 aa		11.99	□□□□□ -0.49
FGFR1-233	ENST00000529552	HSP90AB3P	Q58FF7	597 aa		11.99	□□□□□ -0.49
FGFR1-233	ENST00000529552	SUPT20H	Q8NEM7	779 aa		11.99	□□□□□ -0.49
FGFR1-233	ENST00000529552	UTP14A	Q9BVJ6	771 aa	Known RBP	11.99	□□□□□ -0.49
FGFR1-233	ENST00000529552	PRDM10	Q9NQV6	1147 aa		11.99	□□□□□ -0.49
FGFR1-233	ENST00000529552	COL4A5	P29400	1685 aa		11.98	□□□□□ -0.49
FGFR1-233	ENST00000529552	RASSF10	A6NK89	507 aa		11.98	□□□□□ -0.49
FGFR1-233	ENST00000529552	RIPK4	P57078	832 aa		11.98	□□□□□ -0.49
FGFR1-233	ENST00000529552	DEFB115	Q30KQ5	88 aa		11.98	□□□□□ -0.49
FGFR1-233	ENST00000529552	BABAM1	Q9NWV8	329 aa		11.98	□□□□□ -0.49
FGFR1-233	ENST00000529552	LTBP1	Q14766	1721 aa		11.97	□□□□□ -0.49
FGFR1-233	ENST00000529552	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.97	□□□□□ -0.49
FGFR1-233	ENST00000529552	VPS33B	Q9H267	617 aa		11.97	□□□□□ -0.49
FGFR1-233	ENST00000529552	ATP6V0A2	Q9Y487	856 aa		11.97	□□□□□ -0.49
FGFR1-233	ENST00000529552	SCNN1D	P51172	638 aa		11.96	□□□□□ -0.49
FGFR1-233	ENST00000529552	MAP2K1	Q02750	393 aa	Predicted RBP	11.96	□□□□□ -0.49
FGFR1-233	ENST00000529552	RALBP1	Q15311	655 aa		11.96	□□□□□ -0.49
FGFR1-233	ENST00000529552	AOC3	Q16853	763 aa		11.96	□□□□□ -0.49
FGFR1-233	ENST00000529552	USP50	Q70EL3	339 aa	Predicted RBP	11.96	□□□□□ -0.49
FGFR1-233	ENST00000529552	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.96	□□□□□ -0.49
FGFR1-233	ENST00000529552	TAOK2	Q9UL54	1235 aa		11.96	□□□□□ -0.49
FGFR1-233	ENST00000529552	ABCC4	O15439	1325 aa		11.95	□□□□□ -0.5
FGFR1-233	ENST00000529552	WDR33	Q9C0J8	1336 aa	Known RBP	11.95	□□□□□ -0.5
FGFR1-233	ENST00000529552	EPS15	P42566	896 aa		11.95	□□□□□ -0.5
FGFR1-233	ENST00000529552	ECE1	P42892	770 aa		11.95	□□□□□ -0.5
FGFR1-233	ENST00000529552	AIMP1	Q12904	312 aa	Known RBP	11.95	□□□□□ -0.5
FGFR1-233	ENST00000529552	SLC10A5	Q5PT55	438 aa		11.95	□□□□□ -0.5
FGFR1-233	ENST00000529552	DPP8	Q6V1X1	898 aa	Predicted RBP	11.95	□□□□□ -0.5
FGFR1-233	ENST00000529552	C3orf67	Q6ZVT6	689 aa		11.95	□□□□□ -0.5
FGFR1-233	ENST00000529552	DDX46	Q7L014	1031 aa	Known RBP	11.95	□□□□□ -0.5
FGFR1-233	ENST00000529552	BEGAIN	Q9BUH8	593 aa		11.95	□□□□□ -0.5
FGFR1-233	ENST00000529552	ADARB2	Q9NS39	739 aa	Known RBP	11.95	□□□□□ -0.5
FGFR1-233	ENST00000529552	WBP1L	Q9NX94	342 aa		11.95	□□□□□ -0.5
FGFR1-233	ENST00000529552	THSD7B	Q9C0I4	1608 aa		11.95	□□□□□ -0.5
FGFR1-233	ENST00000529552	SH3TC1	Q8TE82	1336 aa		11.94	□□□□□ -0.5
FGFR1-233	ENST00000529552	BBOX1	O75936	387 aa		11.94	□□□□□ -0.5
FGFR1-233	ENST00000529552	ANXA1	P04083	346 aa		11.94	□□□□□ -0.5
FGFR1-233	ENST00000529552	PYGB	P11216	843 aa		11.94	□□□□□ -0.5
FGFR1-233	ENST00000529552	TMPO	P42166	694 aa	Known RBP	11.94	□□□□□ -0.5
FGFR1-233	ENST00000529552	LBX1	P52954	281 aa		11.94	□□□□□ -0.5
FGFR1-233	ENST00000529552	PDIA6	Q15084	440 aa		11.94	□□□□□ -0.5
FGFR1-233	ENST00000529552	COPS6	Q7L5N1	327 aa		11.94	□□□□□ -0.5
FGFR1-233	ENST00000529552	LRP10	Q7Z4F1	713 aa		11.94	□□□□□ -0.5
FGFR1-233	ENST00000529552	MPND	Q8N594	471 aa		11.94	□□□□□ -0.5
FGFR1-233	ENST00000529552	NECTIN2	Q92692	538 aa		11.94	□□□□□ -0.5
FGFR1-233	ENST00000529552	GPRC5D	Q9NZD1	345 aa		11.94	□□□□□ -0.5
FGFR1-233	ENST00000529552	TRMT112	Q9UI30	125 aa	Known RBP	11.94	□□□□□ -0.5
FGFR1-233	ENST00000529552	ZNRF3	Q9ULT6	936 aa		11.94	□□□□□ -0.5
FGFR1-233	ENST00000529552	CDHR2	Q9BYE9	1310 aa		11.93	□□□□□ -0.5
FGFR1-233	ENST00000529552	GRM1	Q13255	1194 aa		11.93	□□□□□ -0.5
FGFR1-233	ENST00000529552	PROSER3	Q2NL68	480 aa		11.93	□□□□□ -0.5
FGFR1-233	ENST00000529552	TMC4	Q7Z404	712 aa		11.93	□□□□□ -0.5
FGFR1-233	ENST00000529552	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.93	□□□□□ -0.5
FGFR1-233	ENST00000529552	NLRP10	Q86W26	655 aa		11.93	□□□□□ -0.5
FGFR1-233	ENST00000529552	SP8	Q8IXZ3	490 aa		11.93	□□□□□ -0.5
FGFR1-233	ENST00000529552	XAGE3	Q8WTP9	111 aa		11.93	□□□□□ -0.5
FGFR1-233	ENST00000529552	BCL2L13	Q9BXK5	485 aa		11.93	□□□□□ -0.5
FGFR1-233	ENST00000529552	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.93	□□□□□ -0.5
FGFR1-233	ENST00000529552	TAF1	P21675	1872 aa		11.93	□□□□□ -0.5
FGFR1-233	ENST00000529552	LRRC37A	A6NMS7	1700 aa		11.92	□□□□□ -0.5
FGFR1-233	ENST00000529552	DDX60	Q8IY21	1712 aa	Known RBP	11.92	□□□□□ -0.5
FGFR1-233	ENST00000529552	HCLS1	P14317	486 aa	Predicted RBP	11.92	□□□□□ -0.5
FGFR1-233	ENST00000529552	TCIRG1	Q13488	830 aa		11.92	□□□□□ -0.5
FGFR1-233	ENST00000529552	GRAP	Q13588	217 aa		11.92	□□□□□ -0.5
FGFR1-233	ENST00000529552	TNIP1	Q15025	636 aa		11.92	□□□□□ -0.5
FGFR1-233	ENST00000529552	WDR43	Q15061	677 aa	Known RBP eCLIP	11.92	□□□□□ -0.5
FGFR1-233	ENST00000529552	NEUROD2	Q15784	382 aa		11.92	□□□□□ -0.5
FGFR1-233	ENST00000529552	CIAPIN1	Q6FI81	312 aa		11.92	□□□□□ -0.5
FGFR1-233	ENST00000529552	GRAPL	Q8TC17	118 aa	Predicted RBP	11.92	□□□□□ -0.5
FGFR1-233	ENST00000529552	CAPNS2	Q96L46	248 aa		11.92	□□□□□ -0.5
FGFR1-233	ENST00000529552	LAS1L	Q9Y4W2	734 aa	Known RBP	11.92	□□□□□ -0.5
FGFR1-233	ENST00000529552	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.91	□□□□□ -0.5
FGFR1-233	ENST00000529552	HSPA8	P11142	646 aa	Known RBP	11.91	□□□□□ -0.5
FGFR1-233	ENST00000529552	GMPS	P49915	693 aa	Predicted RBP	11.91	□□□□□ -0.5
FGFR1-233	ENST00000529552	CXCL9	Q07325	125 aa		11.91	□□□□□ -0.5
FGFR1-233	ENST00000529552	KIAA2012	Q0VF49	1180 aa		11.91	□□□□□ -0.5
FGFR1-233	ENST00000529552	HDGFL1	Q5TGJ6	251 aa		11.91	□□□□□ -0.5
FGFR1-233	ENST00000529552	SLC51A	Q86UW1	340 aa		11.91	□□□□□ -0.5
FGFR1-233	ENST00000529552	KIF12	Q96FN5	646 aa		11.91	□□□□□ -0.5
FGFR1-233	ENST00000529552	TRAF5	O00463	557 aa		11.9	□□□□□ -0.5
FGFR1-233	ENST00000529552	CYP4F22	Q6NT55	531 aa		11.9	□□□□□ -0.5
FGFR1-233	ENST00000529552	CCDC146	Q8IYE0	955 aa		11.9	□□□□□ -0.5
FGFR1-233	ENST00000529552	CHPF2	Q9P2E5	772 aa		11.9	□□□□□ -0.5
FGFR1-233	ENST00000529552	TLL2	Q9Y6L7	1015 aa		11.9	□□□□□ -0.5
FGFR1-233	ENST00000529552	CHL1	O00533	1208 aa		11.89	□□□□□ -0.51
FGFR1-233	ENST00000529552	RIOK3	O14730	519 aa	Known RBP	11.89	□□□□□ -0.51
FGFR1-233	ENST00000529552	RAD17	O75943	681 aa		11.89	□□□□□ -0.51
FGFR1-233	ENST00000529552	CELF2	O95319	508 aa	Known RBP	11.89	□□□□□ -0.51
FGFR1-233	ENST00000529552	HOXB7	P09629	217 aa		11.89	□□□□□ -0.51
FGFR1-233	ENST00000529552	FMR1	Q06787	632 aa	Known RBP eCLIP	11.89	□□□□□ -0.51
FGFR1-233	ENST00000529552	PLBD2	Q8NHP8	589 aa		11.89	□□□□□ -0.51
FGFR1-233	ENST00000529552	ZC3H15	Q8WU90	426 aa	Known RBP	11.89	□□□□□ -0.51
FGFR1-233	ENST00000529552	RUNDC1	Q96C34	613 aa		11.89	□□□□□ -0.51
FGFR1-233	ENST00000529552	GPR101	Q96P66	508 aa	Predicted RBP	11.89	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms