RNA–Protein interactions for RNA: ENST00000529521.1

FDFT1-216, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 418 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-216ENST00000529521 GNRH1P01148 92 aa3.53□□□□□ -1.84
FDFT1-216ENST00000529521 H2AFB1P0C5Y9 115 aa3.53□□□□□ -1.84
FDFT1-216ENST00000529521 H2AFB2P0C5Z0 115 aa3.53□□□□□ -1.84
FDFT1-216ENST00000529521 COPB2P35606 906 aa3.53□□□□□ -1.84
FDFT1-216ENST00000529521 GYS2P54840 703 aa3.53□□□□□ -1.84
FDFT1-216ENST00000529521 PCBP4P57723 403 aaKnown RBP3.53□□□□□ -1.84
FDFT1-216ENST00000529521 PRRT3Q5FWE3 981 aa3.53□□□□□ -1.84
FDFT1-216ENST00000529521 GNASQ5JWF2 1037 aa3.53□□□□□ -1.84
FDFT1-216ENST00000529521 PROSER2Q86WR7 435 aaPredicted RBP3.53□□□□□ -1.84
FDFT1-216ENST00000529521 PNMA1Q8ND90 353 aa3.53□□□□□ -1.84
FDFT1-216ENST00000529521 MRRFQ96E11 262 aaKnown RBP3.53□□□□□ -1.84
FDFT1-216ENST00000529521 C8orf37Q96NL8 207 aa3.53□□□□□ -1.84
FDFT1-216ENST00000529521 JADE2Q9NQC1 790 aa3.53□□□□□ -1.84
FDFT1-216ENST00000529521 AVENQ9NQS1 362 aaPredicted RBP3.53□□□□□ -1.84
FDFT1-216ENST00000529521 BSDC1Q9NW68 430 aaPredicted RBP3.53□□□□□ -1.84
FDFT1-216ENST00000529521 PPP1R1BQ9UD71 204 aaPredicted RBP3.53□□□□□ -1.84
FDFT1-216ENST00000529521 FRMD4BQ9Y2L6 1034 aa3.53□□□□□ -1.84
FDFT1-216ENST00000529521 PCDHB9Q9Y5E1 797 aa3.53□□□□□ -1.84
FDFT1-216ENST00000529521 PCDHGC4Q9Y5F7 938 aa3.53□□□□□ -1.84
FDFT1-216ENST00000529521 NDUFB9Q9Y6M9 179 aa3.53□□□□□ -1.84
FDFT1-216ENST00000529521 CCDC194A0A1B0GVG4 234 aa3.52□□□□□ -1.85
FDFT1-216ENST00000529521 SPDYE3A6NKU9 549 aa3.52□□□□□ -1.85
FDFT1-216ENST00000529521 SOCS7O14512 581 aa3.52□□□□□ -1.85
FDFT1-216ENST00000529521 PARNO95453 639 aaKnown RBP3.52□□□□□ -1.85
FDFT1-216ENST00000529521 YBX3P16989 372 aaKnown RBP eCLIP3.52□□□□□ -1.858e-19■□□□□ 9.3
FDFT1-216ENST00000529521 CD33P20138 364 aa3.52□□□□□ -1.85
FDFT1-216ENST00000529521 ANP32AP39687 249 aaKnown RBP3.52□□□□□ -1.85
FDFT1-216ENST00000529521 RGS3P49796 1198 aa3.52□□□□□ -1.85
FDFT1-216ENST00000529521 COL9A3Q14050 684 aaPredicted RBP3.52□□□□□ -1.85
FDFT1-216ENST00000529521 GRIK4Q16099 956 aa3.52□□□□□ -1.85
FDFT1-216ENST00000529521 FAM182BQ5T319 152 aa3.52□□□□□ -1.85
FDFT1-216ENST00000529521 TMEM214Q6NUQ4 689 aaKnown RBP3.52□□□□□ -1.85
FDFT1-216ENST00000529521 FIGNL1Q6PIW4 674 aa3.52□□□□□ -1.85
FDFT1-216ENST00000529521 FNBP4Q8N3X1 1017 aaPredicted RBP3.52□□□□□ -1.85
FDFT1-216ENST00000529521 UBXN4Q92575 508 aa3.52□□□□□ -1.85
FDFT1-216ENST00000529521 XAGE2Q96GT9 111 aa3.52□□□□□ -1.85
FDFT1-216ENST00000529521 GPATCH3Q96I76 525 aa3.52□□□□□ -1.85
FDFT1-216ENST00000529521 FMNL2Q96PY5 1086 aa3.52□□□□□ -1.85
FDFT1-216ENST00000529521 KRTAP4-2Q9BYR5 136 aa3.52□□□□□ -1.85
FDFT1-216ENST00000529521 CEP126Q9P2H0 1117 aa3.52□□□□□ -1.85
FDFT1-216ENST00000529521 KLHL42Q9P2K6 505 aa3.52□□□□□ -1.85
FDFT1-216ENST00000529521 ZNF330Q9Y3S2 320 aaPredicted RBP3.52□□□□□ -1.85
FDFT1-216ENST00000529521 PCDHB11Q9Y5F2 797 aa3.52□□□□□ -1.85
FDFT1-216ENST00000529521 COMMD10Q9Y6G5 202 aa3.52□□□□□ -1.85
FDFT1-216ENST00000529521 CECR2Q9BXF3 1484 aa3.52□□□□□ -1.85
FDFT1-216ENST00000529521 COL17A1Q9UMD9 1497 aaPredicted RBP3.52□□□□□ -1.85
FDFT1-216ENST00000529521 SBNO2Q9Y2G9 1366 aa3.51□□□□□ -1.85
FDFT1-216ENST00000529521 FANCIQ9NVI1 1328 aa3.51□□□□□ -1.85
FDFT1-216ENST00000529521 DCDC2BA2VCK2 349 aa3.51□□□□□ -1.85
FDFT1-216ENST00000529521 ATXN7O15265 892 aaPredicted RBP3.51□□□□□ -1.85
FDFT1-216ENST00000529521 PAX4O43316 350 aa3.51□□□□□ -1.85
FDFT1-216ENST00000529521 WDHD1O75717 1129 aaPredicted RBP3.51□□□□□ -1.85
FDFT1-216ENST00000529521 MAPTP10636 758 aaKnown RBP3.51□□□□□ -1.85
FDFT1-216ENST00000529521 BDNFP23560 247 aa3.51□□□□□ -1.85
FDFT1-216ENST00000529521 TXKP42681 527 aa3.51□□□□□ -1.85
FDFT1-216ENST00000529521 TNP2Q05952 138 aa3.51□□□□□ -1.85
FDFT1-216ENST00000529521 RGL3Q3MIN7 710 aa3.51□□□□□ -1.85
FDFT1-216ENST00000529521 ZNF468Q5VIY5 522 aaPredicted RBP3.51□□□□□ -1.85
FDFT1-216ENST00000529521 RNF20Q5VTR2 975 aa3.51□□□□□ -1.85
FDFT1-216ENST00000529521 SND1Q7KZF4 910 aaKnown RBP eCLIP3.51□□□□□ -1.852e-11■■■■□ 22.5
FDFT1-216ENST00000529521 AMOTL1Q8IY63 956 aa3.51□□□□□ -1.85
FDFT1-216ENST00000529521 ZNF513Q8N8E2 541 aaPredicted RBP3.51□□□□□ -1.85
FDFT1-216ENST00000529521 ATL2Q8NHH9 583 aa3.51□□□□□ -1.85
FDFT1-216ENST00000529521 ZCRB1Q8TBF4 217 aaKnown RBP3.51□□□□□ -1.85
FDFT1-216ENST00000529521 SNRNP27Q8WVK2 155 aaKnown RBP3.51□□□□□ -1.85
FDFT1-216ENST00000529521 GJD4Q96KN9 370 aaPredicted RBP3.51□□□□□ -1.85
FDFT1-216ENST00000529521 NACC1Q96RE7 527 aa3.51□□□□□ -1.85
FDFT1-216ENST00000529521 MDFIQ99750 246 aa3.51□□□□□ -1.85
FDFT1-216ENST00000529521 GNL3LQ9NVN8 582 aaKnown RBP3.51□□□□□ -1.85
FDFT1-216ENST00000529521 RAI14Q9P0K7 980 aa3.51□□□□□ -1.85
FDFT1-216ENST00000529521 NRBP1Q9UHY1 535 aa3.51□□□□□ -1.85
FDFT1-216ENST00000529521 TBC1D2BQ9UPU7 963 aa3.51□□□□□ -1.85
FDFT1-216ENST00000529521 CUX2O14529 1486 aa3.51□□□□□ -1.85
FDFT1-216ENST00000529521 ZBBXA8MT70 800 aa3.5□□□□□ -1.85
FDFT1-216ENST00000529521 PPP1R15AO75807 674 aaPredicted RBP3.5□□□□□ -1.85
FDFT1-216ENST00000529521 FBXO45P0C2W1 286 aa3.5□□□□□ -1.85
FDFT1-216ENST00000529521 FAM200BP0CF97 657 aa3.5□□□□□ -1.85
FDFT1-216ENST00000529521 ATP4AP20648 1035 aa3.5□□□□□ -1.85
FDFT1-216ENST00000529521 SSR1P43307 286 aaKnown RBP3.5□□□□□ -1.85
FDFT1-216ENST00000529521 ZRSR2Q15696 482 aaKnown RBP3.5□□□□□ -1.85
FDFT1-216ENST00000529521 ZKSCAN8Q15776 578 aaPredicted RBP3.5□□□□□ -1.85
FDFT1-216ENST00000529521 WASHC4Q2M389 1173 aa3.5□□□□□ -1.85
FDFT1-216ENST00000529521 C11orf96Q7Z7L8 435 aa3.5□□□□□ -1.85
FDFT1-216ENST00000529521 NLRP8Q86W28 1048 aa3.5□□□□□ -1.85
FDFT1-216ENST00000529521 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.5□□□□□ -1.85
FDFT1-216ENST00000529521 RHBDD1Q8TEB9 315 aa3.5□□□□□ -1.85
FDFT1-216ENST00000529521 TRIM34Q9BYJ4 488 aa3.5□□□□□ -1.85
FDFT1-216ENST00000529521 IRF2BPLQ9H1B7 796 aa3.5□□□□□ -1.85
FDFT1-216ENST00000529521 YY1AP1Q9H869 796 aa3.5□□□□□ -1.85
FDFT1-216ENST00000529521 FBXO9Q9UK97 447 aaPredicted RBP3.5□□□□□ -1.85
FDFT1-216ENST00000529521 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.5□□□□□ -1.85
FDFT1-216ENST00000529521 FAN1Q9Y2M0 1017 aa3.5□□□□□ -1.85
FDFT1-216ENST00000529521 ELOA3CA0A087WX78 387 aaPredicted RBP3.49□□□□□ -1.85
FDFT1-216ENST00000529521 CFAP69A5D8W1 941 aa3.49□□□□□ -1.85
FDFT1-216ENST00000529521 ELOA3DA6NLF2 546 aaPredicted RBP3.49□□□□□ -1.85
FDFT1-216ENST00000529521 KHNYNO15037 678 aaKnown RBP3.49□□□□□ -1.85
FDFT1-216ENST00000529521 U2SURPO15042 1029 aaKnown RBP3.49□□□□□ -1.85
FDFT1-216ENST00000529521 STK10O94804 968 aaKnown RBP3.49□□□□□ -1.85
FDFT1-216ENST00000529521 ELNP15502 786 aa3.49□□□□□ -1.85
FDFT1-216ENST00000529521 SELPP16109 830 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms