RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 C9orf78Q9NZ63 289 aaPredicted RBP14.86□□□□□ -0.03
CAPN1-208ENST00000527323 KRT85P78386 507 aa14.85□□□□□ -0.03
CAPN1-208ENST00000527323 ME3Q16798 604 aa14.85□□□□□ -0.03
CAPN1-208ENST00000527323 ZNF710Q8N1W2 664 aa14.85□□□□□ -0.03
CAPN1-208ENST00000527323 ECHDC1Q9NTX5 307 aa14.85□□□□□ -0.03
CAPN1-208ENST00000527323 KIAA1524Q8TCG1 905 aa14.85□□□□□ -0.03
CAPN1-208ENST00000527323 TTC41PQ6P2S7 1318 aa14.85□□□□□ -0.03
CAPN1-208ENST00000527323 MAP3K11Q16584 847 aa14.84□□□□□ -0.03
CAPN1-208ENST00000527323 PPP4R3BQ5MIZ7 849 aa14.84□□□□□ -0.03
CAPN1-208ENST00000527323 BEND3Q5T5X7 828 aa14.84□□□□□ -0.03
CAPN1-208ENST00000527323 PTF1AQ7RTS3 328 aa14.84□□□□□ -0.03
CAPN1-208ENST00000527323 CERKQ8TCT0 537 aa14.84□□□□□ -0.03
CAPN1-208ENST00000527323 NUP62CLQ9H1M0 184 aa14.84□□□□□ -0.03
CAPN1-208ENST00000527323 ZSWIM6Q9HCJ5 1215 aa14.84□□□□□ -0.03
CAPN1-208ENST00000527323 PRDM4Q9UKN5 801 aa14.84□□□□□ -0.03
CAPN1-208ENST00000527323 CKAP2LQ8IYA6 745 aa14.84□□□□□ -0.03
CAPN1-208ENST00000527323 BABAM1Q9NWV8 329 aa14.84□□□□□ -0.03
CAPN1-208ENST00000527323 PA2G4Q9UQ80 394 aaKnown RBP14.84□□□□□ -0.03
CAPN1-208ENST00000527323 TCEANC2Q96MN5 208 aa14.84□□□□□ -0.03
CAPN1-208ENST00000527323 TFIP11Q9UBB9 837 aaKnown RBP14.84□□□□□ -0.03
CAPN1-208ENST00000527323 ASAP1Q9ULH1 1129 aa14.84□□□□□ -0.03
CAPN1-208ENST00000527323 COL5A2P05997 1499 aaPredicted RBP14.83□□□□□ -0.03
CAPN1-208ENST00000527323 PHRF1Q9P1Y6 1649 aaKnown RBP14.83□□□□□ -0.04
CAPN1-208ENST00000527323 AACSQ86V21 672 aa14.83□□□□□ -0.04
CAPN1-208ENST00000527323 KCNF1Q9H3M0 494 aa14.83□□□□□ -0.04
CAPN1-208ENST00000527323 BCL2L12Q9HB09 334 aa14.83□□□□□ -0.04
CAPN1-208ENST00000527323 RBM8AQ9Y5S9 174 aaKnown RBP14.83□□□□□ -0.04
CAPN1-208ENST00000527323 GTF2F1P35269 517 aaKnown RBP eCLIP14.83□□□□□ -0.04
CAPN1-208ENST00000527323 MEX3CQ5U5Q3 659 aaKnown RBP14.83□□□□□ -0.04
CAPN1-208ENST00000527323 ZNF790Q6PG37 636 aa14.83□□□□□ -0.04
CAPN1-208ENST00000527323 TTC6Q86TZ1 520 aa14.83□□□□□ -0.04
CAPN1-208ENST00000527323 LIG1P18858 919 aa14.82□□□□□ -0.04
CAPN1-208ENST00000527323 PTGS1P23219 599 aa14.82□□□□□ -0.04
CAPN1-208ENST00000527323 LUZP1Q86V48 1076 aa14.82□□□□□ -0.04
CAPN1-208ENST00000527323 FAM200AQ8TCP9 573 aa14.82□□□□□ -0.04
CAPN1-208ENST00000527323 TM6SF1Q9BZW5 370 aa14.82□□□□□ -0.04
CAPN1-208ENST00000527323 TNMDQ9H2S6 317 aa14.82□□□□□ -0.04
CAPN1-208ENST00000527323 SLC52A2Q9HAB3 445 aa14.82□□□□□ -0.04
CAPN1-208ENST00000527323 TPCN1Q9ULQ1 816 aa14.82□□□□□ -0.04
CAPN1-208ENST00000527323 KDM6AO15550 1401 aaPredicted RBP14.82□□□□□ -0.04
CAPN1-208ENST00000527323 RIOK3O14730 519 aaKnown RBP14.82□□□□□ -0.04
CAPN1-208ENST00000527323 TYRO3Q06418 890 aa14.82□□□□□ -0.04
CAPN1-208ENST00000527323 CREB3L3Q68CJ9 461 aa14.82□□□□□ -0.04
CAPN1-208ENST00000527323 EVI5LQ96CN4 794 aa14.82□□□□□ -0.04
CAPN1-208ENST00000527323 PSMA5P28066 241 aa14.81□□□□□ -0.04
CAPN1-208ENST00000527323 CDC37L1Q7L3B6 337 aa14.81□□□□□ -0.04
CAPN1-208ENST00000527323 TTC5Q8N0Z6 440 aa14.81□□□□□ -0.04
CAPN1-208ENST00000527323 FAM227BQ96M60 508 aa14.81□□□□□ -0.04
CAPN1-208ENST00000527323 PDCP20941 246 aa14.81□□□□□ -0.04
CAPN1-208ENST00000527323 STK3Q13188 491 aa14.81□□□□□ -0.04
CAPN1-208ENST00000527323 PDCL2Q8N4E4 241 aa14.81□□□□□ -0.04
CAPN1-208ENST00000527323 DACT1Q9NYF0 836 aa14.81□□□□□ -0.04
CAPN1-208ENST00000527323 CCDC171Q6TFL3 1326 aa14.81□□□□□ -0.04
CAPN1-208ENST00000527323 KCNQ2O43526 872 aa14.81□□□□□ -0.04
CAPN1-208ENST00000527323 A1BGP04217 495 aa14.81□□□□□ -0.04
CAPN1-208ENST00000527323 NECTIN1Q15223 517 aa14.81□□□□□ -0.04
CAPN1-208ENST00000527323 CARD10Q9BWT7 1032 aa14.81□□□□□ -0.04
CAPN1-208ENST00000527323 CHMP4AQ9BY43 222 aa14.81□□□□□ -0.04
CAPN1-208ENST00000527323 TRIM5Q9C035 493 aa14.81□□□□□ -0.04
CAPN1-208ENST00000527323 ZHX1Q9UKY1 873 aaPredicted RBP14.81□□□□□ -0.04
CAPN1-208ENST00000527323 ST3GAL1Q11201 340 aa14.8□□□□□ -0.04
CAPN1-208ENST00000527323 BLOC1S2Q6QNY1 142 aa14.8□□□□□ -0.04
CAPN1-208ENST00000527323 CCDC186Q7Z3E2 898 aa14.8□□□□□ -0.04
CAPN1-208ENST00000527323 DHX37Q8IY37 1157 aaKnown RBP14.8□□□□□ -0.04
CAPN1-208ENST00000527323 SPATA32Q96LK8 384 aa14.8□□□□□ -0.04
CAPN1-208ENST00000527323 CCDC8Q9H0W5 538 aaPredicted RBP14.8□□□□□ -0.04
CAPN1-208ENST00000527323 GIGYF1O75420 1035 aaPredicted RBP14.8□□□□□ -0.04
CAPN1-208ENST00000527323 CWF19L2Q2TBE0 894 aaKnown RBP14.8□□□□□ -0.04
CAPN1-208ENST00000527323 ERC1Q8IUD2 1116 aa14.8□□□□□ -0.04
CAPN1-208ENST00000527323 CPDO75976 1380 aa14.79□□□□□ -0.04
CAPN1-208ENST00000527323 SPDYE4A6NLX3 237 aa14.79□□□□□ -0.04
CAPN1-208ENST00000527323 G3BP1Q13283 466 aaKnown RBP eCLIP14.79□□□□□ -0.043e-6■■■□□ 16
CAPN1-208ENST00000527323 NMIQ13287 307 aaPredicted RBP14.79□□□□□ -0.04
CAPN1-208ENST00000527323 ANO6Q4KMQ2 910 aa14.79□□□□□ -0.04
CAPN1-208ENST00000527323 MAP3K2Q9Y2U5 619 aa14.79□□□□□ -0.04
CAPN1-208ENST00000527323 MRVI1Q9Y6F6 885 aa14.79□□□□□ -0.04
CAPN1-208ENST00000527323 PXDNLA1KZ92 1463 aa14.79□□□□□ -0.04
CAPN1-208ENST00000527323 CEMIPQ8WUJ3 1361 aa14.79□□□□□ -0.04
CAPN1-208ENST00000527323 RNF20Q5VTR2 975 aa14.79□□□□□ -0.04
CAPN1-208ENST00000527323 BICD2Q8TD16 824 aa14.79□□□□□ -0.04
CAPN1-208ENST00000527323 FSD1Q9BTV5 496 aa14.79□□□□□ -0.04
CAPN1-208ENST00000527323 BOLA2Q9H3K6 86 aa14.79□□□□□ -0.04
CAPN1-208ENST00000527323 USP42Q9H9J4 1324 aaKnown RBP14.78□□□□□ -0.04
CAPN1-208ENST00000527323 EXOC5O00471 708 aa14.78□□□□□ -0.04
CAPN1-208ENST00000527323 SCAND2PQ9GZW5 306 aaPredicted RBP14.78□□□□□ -0.04
CAPN1-208ENST00000527323 COL18A1P39060 1754 aa14.78□□□□□ -0.04
CAPN1-208ENST00000527323 ATP5J2-PTCD1G3V325 749 aa14.78□□□□□ -0.04
CAPN1-208ENST00000527323 SLC27A2O14975 620 aa14.78□□□□□ -0.04
CAPN1-208ENST00000527323 ATP2B3Q16720 1220 aa14.78□□□□□ -0.04
CAPN1-208ENST00000527323 CBX8Q9HC52 389 aa14.78□□□□□ -0.04
CAPN1-208ENST00000527323 HIP1O00291 1037 aa14.77□□□□□ -0.04
CAPN1-208ENST00000527323 MAP4K1Q92918 833 aa14.77□□□□□ -0.04
CAPN1-208ENST00000527323 DCAF5Q96JK2 942 aa14.77□□□□□ -0.04
CAPN1-208ENST00000527323 SIL1Q9H173 461 aa14.77□□□□□ -0.04
CAPN1-208ENST00000527323 HDAC5Q9UQL6 1122 aa14.77□□□□□ -0.04
CAPN1-208ENST00000527323 LRMPQ12912 555 aa14.77□□□□□ -0.05
CAPN1-208ENST00000527323 ANKRD1Q15327 319 aa14.77□□□□□ -0.05
CAPN1-208ENST00000527323 PIGBQ92521 554 aa14.77□□□□□ -0.05
CAPN1-208ENST00000527323 C16orf45Q96MC5 204 aaPredicted RBP14.77□□□□□ -0.05
CAPN1-208ENST00000527323 NRBP1Q9UHY1 535 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 7438.8 ms