RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 ATF7IPQ6VMQ6 1270 aa15.57■□□□□ 0.08
LRRK1-202ENST00000525284 VAT1LQ9HCJ6 419 aa15.57■□□□□ 0.08
LRRK1-202ENST00000525284 EXOC1Q9NV70 894 aa15.57■□□□□ 0.08
LRRK1-202ENST00000525284 EXOC6BQ9Y2D4 811 aa15.57■□□□□ 0.08
LRRK1-202ENST00000525284 TXNDC9O14530 226 aa15.56■□□□□ 0.08
LRRK1-202ENST00000525284 UAP1Q16222 522 aaPredicted RBP15.56■□□□□ 0.08
LRRK1-202ENST00000525284 KIAA1524Q8TCG1 905 aa15.56■□□□□ 0.08
LRRK1-202ENST00000525284 TSPYL2Q9H2G4 693 aaPredicted RBP15.56■□□□□ 0.08
LRRK1-202ENST00000525284 TTC12Q9H892 705 aaPredicted RBP15.56■□□□□ 0.08
LRRK1-202ENST00000525284 SH2B1Q9NRF2 756 aaPredicted RBP15.56■□□□□ 0.08
LRRK1-202ENST00000525284 CTAGE9A4FU28 777 aa15.56■□□□□ 0.08
LRRK1-202ENST00000525284 PPFIA3O75145 1194 aa15.56■□□□□ 0.08
LRRK1-202ENST00000525284 SKILP12757 684 aa15.56■□□□□ 0.08
LRRK1-202ENST00000525284 SYNJ1O43426 1573 aa15.56■□□□□ 0.08
LRRK1-202ENST00000525284 SMARCA5O60264 1052 aaPredicted RBP15.56■□□□□ 0.08
LRRK1-202ENST00000525284 RHOXF2BP0C7M4 288 aa15.56■□□□□ 0.08
LRRK1-202ENST00000525284 RHOXF2Q9BQY4 288 aa15.56■□□□□ 0.08
LRRK1-202ENST00000525284 BOLA2Q9H3K6 86 aa15.56■□□□□ 0.08
LRRK1-202ENST00000525284 RAB11FIP3O75154 756 aa15.56■□□□□ 0.08
LRRK1-202ENST00000525284 PIP4K2BP78356 416 aa15.56■□□□□ 0.08
LRRK1-202ENST00000525284 HGSO14964 777 aaPredicted RBP15.56■□□□□ 0.08
LRRK1-202ENST00000525284 MGEA5O60502 916 aa15.56■□□□□ 0.08
LRRK1-202ENST00000525284 GBP1P32455 592 aa15.56■□□□□ 0.08
LRRK1-202ENST00000525284 IRX5P78411 483 aaPredicted RBP15.56■□□□□ 0.08
LRRK1-202ENST00000525284 RRAGBQ5VZM2 374 aa15.56■□□□□ 0.08
LRRK1-202ENST00000525284 LRRC43Q8N309 656 aa15.56■□□□□ 0.08
LRRK1-202ENST00000525284 MORC4Q8TE76 937 aa15.56■□□□□ 0.08
LRRK1-202ENST00000525284 SEPT8Q92599 483 aa15.55■□□□□ 0.08
LRRK1-202ENST00000525284 IFIT3O14879 490 aaKnown RBP15.55■□□□□ 0.08
LRRK1-202ENST00000525284 IQCA1Q86XH1 822 aa15.55■□□□□ 0.08
LRRK1-202ENST00000525284 UBLCP1Q8WVY7 318 aaPredicted RBP15.55■□□□□ 0.08
LRRK1-202ENST00000525284 FCHSD2O94868 740 aa15.55■□□□□ 0.08
LRRK1-202ENST00000525284 UBA7P41226 1012 aa15.55■□□□□ 0.08
LRRK1-202ENST00000525284 NOLC1Q14978 699 aaKnown RBP eCLIP15.55■□□□□ 0.08
LRRK1-202ENST00000525284 TTF1Q15361 905 aaPredicted RBP15.55■□□□□ 0.08
LRRK1-202ENST00000525284 FAM76AQ8TAV0 307 aa15.55■□□□□ 0.08
LRRK1-202ENST00000525284 GSDMBQ8TAX9 411 aa15.55■□□□□ 0.08
LRRK1-202ENST00000525284 AKNAQ7Z591 1439 aa15.55■□□□□ 0.08
LRRK1-202ENST00000525284 BICDL2A1A5D9 508 aa15.55■□□□□ 0.08
LRRK1-202ENST00000525284 TBCAO75347 108 aaKnown RBP15.55■□□□□ 0.08
LRRK1-202ENST00000525284 GJB2P29033 226 aa15.55■□□□□ 0.08
LRRK1-202ENST00000525284 UTP14AQ9BVJ6 771 aaKnown RBP15.55■□□□□ 0.08
LRRK1-202ENST00000525284 SDCCAG8Q86SQ7 713 aaPredicted RBP15.54■□□□□ 0.08
LRRK1-202ENST00000525284 AKAP2Q9Y2D5 859 aa15.54■□□□□ 0.08
LRRK1-202ENST00000525284 ATP2A2P16615 1042 aaKnown RBP15.54■□□□□ 0.08
LRRK1-202ENST00000525284 PRPHP41219 470 aa15.54■□□□□ 0.08
LRRK1-202ENST00000525284 WDR63Q8IWG1 891 aa15.54■□□□□ 0.08
LRRK1-202ENST00000525284 ZNF213O14771 459 aa15.54■□□□□ 0.08
LRRK1-202ENST00000525284 PPP1R7Q15435 360 aa15.54■□□□□ 0.08
LRRK1-202ENST00000525284 ARHGEF2Q92974 986 aaKnown RBP15.54■□□□□ 0.08
LRRK1-202ENST00000525284 ZNF219Q9P2Y4 722 aaPredicted RBP15.54■□□□□ 0.08
LRRK1-202ENST00000525284 SMG6Q86US8 1419 aaKnown RBP15.54■□□□□ 0.08
LRRK1-202ENST00000525284 CCDC102BQ68D86 513 aa15.53■□□□□ 0.08
LRRK1-202ENST00000525284 GIMAP6Q6P9H5 292 aa15.53■□□□□ 0.08
LRRK1-202ENST00000525284 IFT74Q96LB3 600 aa15.53■□□□□ 0.08
LRRK1-202ENST00000525284 HCLS1P14317 486 aaPredicted RBP15.53■□□□□ 0.08
LRRK1-202ENST00000525284 AFMP43652 599 aa15.53■□□□□ 0.08
LRRK1-202ENST00000525284 FMNL3Q8IVF7 1028 aa15.53■□□□□ 0.08
LRRK1-202ENST00000525284 CATIPQ7Z7H3 387 aa15.53■□□□□ 0.08
LRRK1-202ENST00000525284 RASA3Q14644 834 aa15.53■□□□□ 0.08
LRRK1-202ENST00000525284 SULT6B1Q6IMI4 303 aa15.53■□□□□ 0.08
LRRK1-202ENST00000525284 RSPH3Q86UC2 560 aa15.53■□□□□ 0.08
LRRK1-202ENST00000525284 MRRFQ96E11 262 aaKnown RBP15.53■□□□□ 0.08
LRRK1-202ENST00000525284 HPDP32754 393 aaPredicted RBP15.53■□□□□ 0.08
LRRK1-202ENST00000525284 CCDC14Q49A88 953 aa15.53■□□□□ 0.08
LRRK1-202ENST00000525284 LRSAM1Q6UWE0 723 aa15.53■□□□□ 0.08
LRRK1-202ENST00000525284 SMIM24O75264 130 aa15.52■□□□□ 0.08
LRRK1-202ENST00000525284 ZNF131P52739 623 aa15.52■□□□□ 0.08
LRRK1-202ENST00000525284 ZC3H6P61129 1189 aaKnown RBP15.52■□□□□ 0.08
LRRK1-202ENST00000525284 RAB11FIP4Q86YS3 637 aa15.52■□□□□ 0.08
LRRK1-202ENST00000525284 CCDC65Q8IXS2 484 aa15.52■□□□□ 0.08
LRRK1-202ENST00000525284 VGLL3A8MV65 326 aa15.52■□□□□ 0.08
LRRK1-202ENST00000525284 MX1P20591 662 aa15.52■□□□□ 0.08
LRRK1-202ENST00000525284 ERCC6LQ2NKX8 1250 aa15.52■□□□□ 0.08
LRRK1-202ENST00000525284 LCA5Q86VQ0 697 aa15.52■□□□□ 0.08
LRRK1-202ENST00000525284 IFIT1P09914 478 aaKnown RBP15.52■□□□□ 0.07
LRRK1-202ENST00000525284 CAVIN4Q5BKX8 364 aa15.52■□□□□ 0.07
LRRK1-202ENST00000525284 KANK3Q6NY19 840 aa15.52■□□□□ 0.07
LRRK1-202ENST00000525284 GTF3C6Q969F1 213 aa15.52■□□□□ 0.07
LRRK1-202ENST00000525284 NKIRAS1Q9NYS0 192 aa15.52■□□□□ 0.07
LRRK1-202ENST00000525284 LIMCH1Q9UPQ0 1083 aa15.52■□□□□ 0.07
LRRK1-202ENST00000525284 CCDC7Q96M83 1385 aa15.52■□□□□ 0.07
LRRK1-202ENST00000525284 PRPF31Q8WWY3 499 aaKnown RBP15.52■□□□□ 0.07
LRRK1-202ENST00000525284 BRD4O60885 1362 aaPredicted RBP15.51■□□□□ 0.07
LRRK1-202ENST00000525284 WDHD1O75717 1129 aaPredicted RBP15.51■□□□□ 0.07
LRRK1-202ENST00000525284 ARFGAP2Q8N6H7 521 aa15.51■□□□□ 0.07
LRRK1-202ENST00000525284 ZMAT2Q96NC0 199 aaKnown RBP15.51■□□□□ 0.07
LRRK1-202ENST00000525284 PDS5BQ9NTI5 1447 aa15.51■□□□□ 0.07
LRRK1-202ENST00000525284 TSNAXIP1Q2TAA8 658 aa15.51■□□□□ 0.07
LRRK1-202ENST00000525284 NAA16Q6N069 864 aaPredicted RBP15.51■□□□□ 0.07
LRRK1-202ENST00000525284 ZNF530Q6P9A1 599 aaPredicted RBP15.51■□□□□ 0.07
LRRK1-202ENST00000525284 PPP1R21Q6ZMI0 780 aa15.51■□□□□ 0.07
LRRK1-202ENST00000525284 CCDC186Q7Z3E2 898 aa15.51■□□□□ 0.07
LRRK1-202ENST00000525284 HMGB1P09429 215 aaKnown RBP15.51■□□□□ 0.07
LRRK1-202ENST00000525284 PPP2R1AP30153 589 aa15.51■□□□□ 0.07
LRRK1-202ENST00000525284 KARSQ15046 597 aaKnown RBP15.51■□□□□ 0.07
LRRK1-202ENST00000525284 UVSSAQ2YD98 709 aa15.51■□□□□ 0.07
LRRK1-202ENST00000525284 CEP128Q6ZU80 1094 aa15.51■□□□□ 0.07
LRRK1-202ENST00000525284 PPARDQ03181 441 aa15.51■□□□□ 0.07
LRRK1-202ENST00000525284 ESCO1Q5FWF5 840 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms