RNA–Protein interactions for RNA: ENST00000524208.5

POLB-215, Transcript of DNA polymerase beta, humanhuman

TSL 5

Gene POLB, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-215ENST00000524208 ERICH6Q7L0X2 663 aa10.36□□□□□ -0.75
POLB-215ENST00000524208 PPP1R1BQ9UD71 204 aaPredicted RBP10.36□□□□□ -0.75
POLB-215ENST00000524208 CEMIPQ8WUJ3 1361 aa10.36□□□□□ -0.75
POLB-215ENST00000524208 KIAA1551Q9HCM1 1747 aa10.36□□□□□ -0.75
POLB-215ENST00000524208 CNTNAP4Q9C0A0 1308 aa10.35□□□□□ -0.75
POLB-215ENST00000524208 CFHP08603 1231 aa10.35□□□□□ -0.75
POLB-215ENST00000524208 PRKAR2BP31323 418 aa10.35□□□□□ -0.75
POLB-215ENST00000524208 CABP4P57796 275 aa10.35□□□□□ -0.75
POLB-215ENST00000524208 NFATC2IPQ8NCF5 419 aa10.35□□□□□ -0.75
POLB-215ENST00000524208 ARXQ96QS3 562 aa10.35□□□□□ -0.75
POLB-215ENST00000524208 SLC52A2Q9HAB3 445 aa10.35□□□□□ -0.75
POLB-215ENST00000524208 POLR3EQ9NVU0 708 aa10.35□□□□□ -0.75
POLB-215ENST00000524208 SOWAHBA6NEL2 793 aa10.34□□□□□ -0.75
POLB-215ENST00000524208 ATP6V1AP38606 617 aa10.34□□□□□ -0.75
POLB-215ENST00000524208 NLGN2Q8NFZ4 835 aa10.34□□□□□ -0.75
POLB-215ENST00000524208 SLC16A10Q8TF71 515 aa10.34□□□□□ -0.75
POLB-215ENST00000524208 PTCD1O75127 700 aaKnown RBP10.33□□□□□ -0.76
POLB-215ENST00000524208 SSFA2P28290 1259 aa10.33□□□□□ -0.76
POLB-215ENST00000524208 GJA5P36382 358 aa10.33□□□□□ -0.76
POLB-215ENST00000524208 SLC39A6Q13433 755 aa10.33□□□□□ -0.76
POLB-215ENST00000524208 KMT5BQ4FZB7 885 aa10.33□□□□□ -0.76
POLB-215ENST00000524208 RIC3Q7Z5B4 369 aa10.33□□□□□ -0.76
POLB-215ENST00000524208 IL17REQ8NFR9 667 aa10.33□□□□□ -0.76
POLB-215ENST00000524208 SYT17Q9BSW7 474 aa10.33□□□□□ -0.76
POLB-215ENST00000524208 GRIPAP1Q4V328 841 aa10.32□□□□□ -0.76
POLB-215ENST00000524208 PRR14Q9BWN1 585 aa10.32□□□□□ -0.76
POLB-215ENST00000524208 MOXD2PA6NHM9 499 aa10.31□□□□□ -0.76
POLB-215ENST00000524208 SPTLC1O15269 473 aa10.31□□□□□ -0.76
POLB-215ENST00000524208 HOXA2O43364 376 aa10.31□□□□□ -0.76
POLB-215ENST00000524208 CRKLP46109 303 aaKnown RBP10.31□□□□□ -0.76
POLB-215ENST00000524208 DDX10Q13206 875 aaKnown RBP10.31□□□□□ -0.76
POLB-215ENST00000524208 TUSC1Q2TAM9 212 aa10.31□□□□□ -0.76
POLB-215ENST00000524208 INTS5Q6P9B9 1019 aaKnown RBP10.31□□□□□ -0.76
POLB-215ENST00000524208 RSBN1LQ6PCB5 846 aaPredicted RBP10.31□□□□□ -0.76
POLB-215ENST00000524208 DNAJC10Q8IXB1 793 aa10.31□□□□□ -0.76
POLB-215ENST00000524208 CFAP53Q96M91 514 aa10.31□□□□□ -0.76
POLB-215ENST00000524208 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.31□□□□□ -0.76
POLB-215ENST00000524208 C10orf71Q711Q0 1435 aa10.31□□□□□ -0.76
POLB-215ENST00000524208 SCN7AQ01118 1682 aa10.31□□□□□ -0.76
POLB-215ENST00000524208 KCNQ3O43525 872 aa10.3□□□□□ -0.76
POLB-215ENST00000524208 U2AF1L5P0DN76 240 aaPredicted RBP10.3□□□□□ -0.76
POLB-215ENST00000524208 PPP4CP60510 307 aa10.3□□□□□ -0.76
POLB-215ENST00000524208 U2AF1Q01081 240 aaKnown RBP eCLIP10.3□□□□□ -0.76
POLB-215ENST00000524208 PROCA1Q8NCQ7 364 aaPredicted RBP10.3□□□□□ -0.76
POLB-215ENST00000524208 GAS2L2Q8NHY3 880 aa10.3□□□□□ -0.76
POLB-215ENST00000524208 LIMD1Q9UGP4 676 aa10.3□□□□□ -0.76
POLB-215ENST00000524208 TSR3Q9UJK0 312 aaKnown RBP10.3□□□□□ -0.76
POLB-215ENST00000524208 HPS5Q9UPZ3 1129 aa10.3□□□□□ -0.76
POLB-215ENST00000524208 KIF13BQ9NQT8 1826 aa10.3□□□□□ -0.76
POLB-215ENST00000524208 SOS1Q07889 1333 aaPredicted RBP10.3□□□□□ -0.76
POLB-215ENST00000524208 PXDNLA1KZ92 1463 aa10.3□□□□□ -0.76
POLB-215ENST00000524208 KDM3BQ7LBC6 1761 aa10.29□□□□□ -0.76
POLB-215ENST00000524208 DLG5Q8TDM6 1919 aa10.29□□□□□ -0.76
POLB-215ENST00000524208 GNAT3A8MTJ3 354 aa10.29□□□□□ -0.76
POLB-215ENST00000524208 BCAMP50895 628 aa10.29□□□□□ -0.76
POLB-215ENST00000524208 RC3H1Q5TC82 1133 aaKnown RBP10.29□□□□□ -0.76
POLB-215ENST00000524208 PLEKHF1Q96S99 279 aa10.29□□□□□ -0.76
POLB-215ENST00000524208 SRP68Q9UHB9 627 aaKnown RBP10.29□□□□□ -0.76
POLB-215ENST00000524208 CYP19A1P11511 503 aaPredicted RBP10.28□□□□□ -0.76
POLB-215ENST00000524208 NDUFV2P19404 249 aa10.28□□□□□ -0.76
POLB-215ENST00000524208 POLD1P28340 1107 aa10.28□□□□□ -0.76
POLB-215ENST00000524208 FUT2Q10981 343 aa10.28□□□□□ -0.76
POLB-215ENST00000524208 DCTN1Q14203 1278 aa10.28□□□□□ -0.76
POLB-215ENST00000524208 FLAD1Q8NFF5 587 aa10.28□□□□□ -0.76
POLB-215ENST00000524208 ZNF496Q96IT1 587 aaPredicted RBP10.28□□□□□ -0.76
POLB-215ENST00000524208 ZBTB1Q9Y2K1 713 aa10.28□□□□□ -0.76
POLB-215ENST00000524208 USP42Q9H9J4 1324 aaKnown RBP10.28□□□□□ -0.76
POLB-215ENST00000524208 HEG1Q9ULI3 1381 aa10.27□□□□□ -0.76
POLB-215ENST00000524208 CEP350Q5VT06 3117 aa10.27□□□□□ -0.76
POLB-215ENST00000524208 RPS6KA4O75676 772 aa10.27□□□□□ -0.77
POLB-215ENST00000524208 MMP10P09238 476 aa10.27□□□□□ -0.77
POLB-215ENST00000524208 GYS1P13807 737 aa10.27□□□□□ -0.77
POLB-215ENST00000524208 YBX3P16989 372 aaKnown RBP eCLIP10.27□□□□□ -0.77
POLB-215ENST00000524208 DDR1Q08345 913 aa10.27□□□□□ -0.77
POLB-215ENST00000524208 MCM10Q7L590 875 aa10.27□□□□□ -0.77
POLB-215ENST00000524208 RTCBQ9Y3I0 505 aaKnown RBP10.27□□□□□ -0.77
POLB-215ENST00000524208 COL15A1P39059 1388 aa10.26□□□□□ -0.77
POLB-215ENST00000524208 LAMB4A4D0S4 1761 aa10.26□□□□□ -0.77
POLB-215ENST00000524208 PRAMEF22A3QJZ6 481 aa10.26□□□□□ -0.77
POLB-215ENST00000524208 ACTN4O43707 911 aaKnown RBP10.26□□□□□ -0.77
POLB-215ENST00000524208 FDX1P10109 184 aa10.26□□□□□ -0.77
POLB-215ENST00000524208 RALBP1Q15311 655 aa10.26□□□□□ -0.77
POLB-215ENST00000524208 ZNF790Q6PG37 636 aa10.26□□□□□ -0.77
POLB-215ENST00000524208 THUMPD2Q9BTF0 503 aaKnown RBP10.26□□□□□ -0.77
POLB-215ENST00000524208 CCDC87Q9NVE4 849 aa10.26□□□□□ -0.77
POLB-215ENST00000524208 NUDCQ9Y266 331 aa10.26□□□□□ -0.77
POLB-215ENST00000524208 MYBBP1AQ9BQG0 1328 aaKnown RBP10.26□□□□□ -0.77
POLB-215ENST00000524208 BCORQ6W2J9 1755 aa10.26□□□□□ -0.77
POLB-215ENST00000524208 NRXN2Q9P2S2 1712 aa10.25□□□□□ -0.77
POLB-215ENST00000524208 PRPF38BQ5VTL8 546 aaKnown RBP10.25□□□□□ -0.77
POLB-215ENST00000524208 BRCA1P38398 1863 aaKnown RBP10.25□□□□□ -0.77
POLB-215ENST00000524208 CSPP1Q1MSJ5 1256 aa10.24□□□□□ -0.77
POLB-215ENST00000524208 PRKRIP1Q9H875 184 aaPredicted RBP10.24□□□□□ -0.77
POLB-215ENST00000524208 CARMIL3Q8ND23 1372 aa10.24□□□□□ -0.77
POLB-215ENST00000524208 ITGBL1O95965 494 aaPredicted RBP10.23□□□□□ -0.77
POLB-215ENST00000524208 TEFQ10587 303 aa10.23□□□□□ -0.77
POLB-215ENST00000524208 FLIIQ13045 1269 aa10.23□□□□□ -0.77
POLB-215ENST00000524208 NFE2L2Q16236 605 aa10.23□□□□□ -0.77
POLB-215ENST00000524208 TRAPPC3LQ5T215 181 aa10.23□□□□□ -0.77
POLB-215ENST00000524208 PPP2R2DQ66LE6 453 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms