RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 IP6K2Q9UHH9 426 aa7.68□□□□□ -1.18
SDC2-208ENST00000523877 GNEQ9Y223 722 aaKnown RBP7.68□□□□□ -1.18
SDC2-208ENST00000523877 SLC45A1Q9Y2W3 748 aa7.68□□□□□ -1.18
SDC2-208ENST00000523877 TMEM238LA0A1B0GVL6 79 aa7.67□□□□□ -1.18
SDC2-208ENST00000523877 KDM4FA0A1W2PPD8 638 aa7.67□□□□□ -1.18
SDC2-208ENST00000523877 TRAPPC10P48553 1259 aa7.67□□□□□ -1.18
SDC2-208ENST00000523877 MARSP56192 900 aaKnown RBP7.67□□□□□ -1.18
SDC2-208ENST00000523877 RWDD2BP57060 319 aa7.67□□□□□ -1.18
SDC2-208ENST00000523877 DDB1Q16531 1140 aa7.67□□□□□ -1.18
SDC2-208ENST00000523877 COBLL1Q53SF7 1204 aa7.67□□□□□ -1.18
SDC2-208ENST00000523877 CCSAPQ6IQ19 270 aaPredicted RBP7.67□□□□□ -1.18
SDC2-208ENST00000523877 NYAP1Q6ZVC0 841 aa7.67□□□□□ -1.18
SDC2-208ENST00000523877 PLPP6Q8IY26 295 aa7.67□□□□□ -1.18
SDC2-208ENST00000523877 EFCAB13Q8IY85 973 aa7.67□□□□□ -1.18
SDC2-208ENST00000523877 RPUSD2Q8IZ73 545 aaKnown RBP7.67□□□□□ -1.18
SDC2-208ENST00000523877 ERP27Q96DN0 273 aa7.67□□□□□ -1.18
SDC2-208ENST00000523877 C8orf48Q96LL4 319 aa7.67□□□□□ -1.18
SDC2-208ENST00000523877 TRIM7Q9C029 511 aa7.67□□□□□ -1.18
SDC2-208ENST00000523877 RPAP3Q9H6T3 665 aaPredicted RBP7.67□□□□□ -1.18
SDC2-208ENST00000523877 ZNHIT6Q9NWK9 470 aaKnown RBP7.67□□□□□ -1.18
SDC2-208ENST00000523877 PCSK1NQ9UHG2 260 aa7.67□□□□□ -1.18
SDC2-208ENST00000523877 BLOC1S6Q9UL45 172 aa7.67□□□□□ -1.18
SDC2-208ENST00000523877 ATP6V0A2Q9Y487 856 aa7.67□□□□□ -1.18
SDC2-208ENST00000523877 MTRF1O75570 445 aaKnown RBP7.66□□□□□ -1.18
SDC2-208ENST00000523877 RNASEH2AO75792 299 aaKnown RBP7.66□□□□□ -1.18
SDC2-208ENST00000523877 BAG4O95429 457 aaKnown RBP7.66□□□□□ -1.18
SDC2-208ENST00000523877 VIL1P09327 827 aaKnown RBP7.66□□□□□ -1.18
SDC2-208ENST00000523877 HARSP12081 509 aaKnown RBP7.66□□□□□ -1.18
SDC2-208ENST00000523877 TNNT1P13805 278 aa7.66□□□□□ -1.18
SDC2-208ENST00000523877 ALDH1B1P30837 517 aa7.66□□□□□ -1.18
SDC2-208ENST00000523877 CASP2P42575 452 aa7.66□□□□□ -1.18
SDC2-208ENST00000523877 GSCP56915 257 aaPredicted RBP7.66□□□□□ -1.18
SDC2-208ENST00000523877 SLMAPQ14BN4 828 aa7.66□□□□□ -1.18
SDC2-208ENST00000523877 CPLX2Q6PUV4 134 aaKnown RBP7.66□□□□□ -1.18
SDC2-208ENST00000523877 ADGRD1Q6QNK2 874 aa7.66□□□□□ -1.18
SDC2-208ENST00000523877 CDC37L1Q7L3B6 337 aa7.66□□□□□ -1.18
SDC2-208ENST00000523877 NCAPG2Q86XI2 1143 aa7.66□□□□□ -1.18
SDC2-208ENST00000523877 NPAS4Q8IUM7 802 aa7.66□□□□□ -1.18
SDC2-208ENST00000523877 TEX19Q8NA77 164 aa7.66□□□□□ -1.18
SDC2-208ENST00000523877 N4BP2L2Q92802 583 aaPredicted RBP7.66□□□□□ -1.18
SDC2-208ENST00000523877 TNPO1Q92973 898 aaKnown RBP7.66□□□□□ -1.18
SDC2-208ENST00000523877 RSRC1Q96IZ7 334 aaKnown RBP7.66□□□□□ -1.18
SDC2-208ENST00000523877 RASSF4Q9H2L5 321 aa7.66□□□□□ -1.18
SDC2-208ENST00000523877 IFT57Q9NWB7 429 aa7.66□□□□□ -1.18
SDC2-208ENST00000523877 CPSF2Q9P2I0 782 aaKnown RBP7.66□□□□□ -1.18
SDC2-208ENST00000523877 HDAC9Q9UKV0 1011 aa7.66□□□□□ -1.18
SDC2-208ENST00000523877 PIK3R4Q99570 1358 aa7.66□□□□□ -1.18
SDC2-208ENST00000523877 CCDC163A0A0D9SF12 145 aa7.65□□□□□ -1.18
SDC2-208ENST00000523877 F8VZ95 297 aa7.65□□□□□ -1.18
SDC2-208ENST00000523877 RPN1P04843 607 aaKnown RBP7.65□□□□□ -1.18
SDC2-208ENST00000523877 PSMA3P25788 255 aa7.65□□□□□ -1.18
SDC2-208ENST00000523877 RAPGEF1Q13905 1077 aa7.65□□□□□ -1.18
SDC2-208ENST00000523877 VPS72Q15906 364 aa7.65□□□□□ -1.18
SDC2-208ENST00000523877 CCDC178Q5BJE1 867 aa7.65□□□□□ -1.18
SDC2-208ENST00000523877 ACBD5Q5T8D3 534 aaPredicted RBP7.65□□□□□ -1.18
SDC2-208ENST00000523877 TTLL5Q6EMB2 1281 aa7.65□□□□□ -1.18
SDC2-208ENST00000523877 ZBED9Q6R2W3 1325 aa7.65□□□□□ -1.18
SDC2-208ENST00000523877 TRIML1Q8N9V2 468 aa7.65□□□□□ -1.18
SDC2-208ENST00000523877 NEK9Q8TD19 979 aa7.65□□□□□ -1.18
SDC2-208ENST00000523877 HELQQ8TDG4 1101 aa7.65□□□□□ -1.18
SDC2-208ENST00000523877 HDAC7Q8WUI4 952 aa7.65□□□□□ -1.18
SDC2-208ENST00000523877 ZBTB10Q96DT7 871 aa7.65□□□□□ -1.18
SDC2-208ENST00000523877 GSDMAQ96QA5 445 aa7.65□□□□□ -1.18
SDC2-208ENST00000523877 XPO4Q9C0E2 1151 aaKnown RBP7.65□□□□□ -1.18
SDC2-208ENST00000523877 PIF1Q9H611 641 aa7.65□□□□□ -1.18
SDC2-208ENST00000523877 AS3MTQ9HBK9 375 aa7.65□□□□□ -1.18
SDC2-208ENST00000523877 DIAPH3Q9NSV4 1193 aa7.65□□□□□ -1.18
SDC2-208ENST00000523877 GINM1Q9NU53 330 aa7.65□□□□□ -1.18
SDC2-208ENST00000523877 QPCTLQ9NXS2 382 aa7.65□□□□□ -1.18
SDC2-208ENST00000523877 PLA2G2EQ9NZK7 142 aa7.65□□□□□ -1.18
SDC2-208ENST00000523877 SLAIN2Q9P270 581 aa7.65□□□□□ -1.18
SDC2-208ENST00000523877 XPO7Q9UIA9 1087 aaKnown RBP7.65□□□□□ -1.18
SDC2-208ENST00000523877 RABGAP1Q9Y3P9 1069 aa7.65□□□□□ -1.18
SDC2-208ENST00000523877 A0A1W2PRQ8 180 aa7.64□□□□□ -1.19
SDC2-208ENST00000523877 GTPBP10A4D1E9 387 aaKnown RBP7.64□□□□□ -1.19
SDC2-208ENST00000523877 ARHGAP33O14559 1287 aa7.64□□□□□ -1.19
SDC2-208ENST00000523877 BBOX1O75936 387 aa7.64□□□□□ -1.19
SDC2-208ENST00000523877 MMEP08473 750 aa7.64□□□□□ -1.19
SDC2-208ENST00000523877 HSD3B2P26439 372 aa7.64□□□□□ -1.19
SDC2-208ENST00000523877 RDXP35241 583 aaKnown RBP7.64□□□□□ -1.19
SDC2-208ENST00000523877 INHBEP58166 350 aa7.64□□□□□ -1.19
SDC2-208ENST00000523877 MUM1Q2TAK8 710 aa7.64□□□□□ -1.19
SDC2-208ENST00000523877 RNF20Q5VTR2 975 aa7.64□□□□□ -1.19
SDC2-208ENST00000523877 DMRTA1Q5VZB9 504 aa7.64□□□□□ -1.19
SDC2-208ENST00000523877 KANK3Q6NY19 840 aa7.64□□□□□ -1.19
SDC2-208ENST00000523877 NUTM1Q86Y26 1132 aa7.64□□□□□ -1.19
SDC2-208ENST00000523877 PRPF38AQ8NAV1 312 aaKnown RBP7.64□□□□□ -1.19
SDC2-208ENST00000523877 ZFPM2Q8WW38 1151 aa7.64□□□□□ -1.19
SDC2-208ENST00000523877 TRIM11Q96F44 468 aa7.64□□□□□ -1.19
SDC2-208ENST00000523877 FAM81BQ96LP2 452 aa7.64□□□□□ -1.19
SDC2-208ENST00000523877 BAG1Q99933 345 aaPredicted RBP7.64□□□□□ -1.19
SDC2-208ENST00000523877 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.64□□□□□ -1.19
SDC2-208ENST00000523877 RBSNQ9H1K0 784 aa7.64□□□□□ -1.19
SDC2-208ENST00000523877 GPHNQ9NQX3 736 aaPredicted RBP7.64□□□□□ -1.19
SDC2-208ENST00000523877 ZMAT5Q9UDW3 170 aaKnown RBP7.64□□□□□ -1.19
SDC2-208ENST00000523877 RSPH14Q9UHP6 348 aa7.64□□□□□ -1.19
SDC2-208ENST00000523877 BARX2Q9UMQ3 279 aaPredicted RBP7.64□□□□□ -1.19
SDC2-208ENST00000523877 ATP8A1Q9Y2Q0 1164 aa7.64□□□□□ -1.19
SDC2-208ENST00000523877 N6AMT1Q9Y5N5 214 aa7.64□□□□□ -1.19
SDC2-208ENST00000523877 PRDM2Q13029 1718 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms