RNA–Protein interactions for RNA: ENST00000522139.1

CNOT8-220, Transcript of CCR4-NOT transcription complex subunit 8, humanhuman

TSL 3

Gene CNOT8, Length 566 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT8-220ENST00000522139 CFHR5Q9BXR6 569 aa8.39□□□□□ -1.07
CNOT8-220ENST00000522139 DNAJC25Q9H1X3 360 aa8.39□□□□□ -1.07
CNOT8-220ENST00000522139 H7C1W4 665 aa8.38□□□□□ -1.07
CNOT8-220ENST00000522139 CPNE3O75131 537 aaKnown RBP8.38□□□□□ -1.07
CNOT8-220ENST00000522139 FAM157BP0CG42 384 aa8.38□□□□□ -1.07
CNOT8-220ENST00000522139 USPL1Q5W0Q7 1092 aa8.38□□□□□ -1.07
CNOT8-220ENST00000522139 TRIM22Q8IYM9 498 aa8.38□□□□□ -1.07
CNOT8-220ENST00000522139 EFSO43281 561 aa8.37□□□□□ -1.07
CNOT8-220ENST00000522139 WIPF1O43516 503 aa8.37□□□□□ -1.07
CNOT8-220ENST00000522139 BNIP3LO60238 219 aa8.37□□□□□ -1.07
CNOT8-220ENST00000522139 PHACTR2O75167 634 aa8.37□□□□□ -1.07
CNOT8-220ENST00000522139 SASH3O75995 380 aa8.37□□□□□ -1.07
CNOT8-220ENST00000522139 MAPTP10636 758 aaKnown RBP8.37□□□□□ -1.07
CNOT8-220ENST00000522139 TNP2Q05952 138 aa8.37□□□□□ -1.07
CNOT8-220ENST00000522139 GRIN2CQ14957 1233 aa8.37□□□□□ -1.07
CNOT8-220ENST00000522139 NLRP13Q86W25 1043 aa8.37□□□□□ -1.07
CNOT8-220ENST00000522139 SNX29Q8TEQ0 813 aa8.37□□□□□ -1.07
CNOT8-220ENST00000522139 FBF1Q8TES7 1133 aa8.37□□□□□ -1.07
CNOT8-220ENST00000522139 BCL11AQ9H165 835 aa8.37□□□□□ -1.07
CNOT8-220ENST00000522139 ZFYVE28Q9HCC9 887 aa8.37□□□□□ -1.07
CNOT8-220ENST00000522139 STRN4Q9NRL3 753 aa8.37□□□□□ -1.07
CNOT8-220ENST00000522139 ERBB4Q15303 1308 aa8.36□□□□□ -1.07
CNOT8-220ENST00000522139 DAB2P98082 770 aa8.36□□□□□ -1.07
CNOT8-220ENST00000522139 LCE2CQ5TA81 110 aa8.36□□□□□ -1.07
CNOT8-220ENST00000522139 KRT25Q7Z3Z0 450 aa8.36□□□□□ -1.07
CNOT8-220ENST00000522139 TMC4Q7Z404 712 aa8.36□□□□□ -1.07
CNOT8-220ENST00000522139 ZNF837Q96EG3 531 aaPredicted RBP8.36□□□□□ -1.07
CNOT8-220ENST00000522139 CNTN3Q9P232 1028 aa8.36□□□□□ -1.07
CNOT8-220ENST00000522139 HCN2Q9UL51 889 aa8.36□□□□□ -1.07
CNOT8-220ENST00000522139 RECKO95980 971 aa8.35□□□□□ -1.07
CNOT8-220ENST00000522139 POLR3DP05423 398 aaPredicted RBP8.35□□□□□ -1.07
CNOT8-220ENST00000522139 ITGA6P23229 1130 aa8.35□□□□□ -1.07
CNOT8-220ENST00000522139 PSMD2Q13200 908 aa8.35□□□□□ -1.07
CNOT8-220ENST00000522139 TSNAXIP1Q2TAA8 658 aa8.35□□□□□ -1.07
CNOT8-220ENST00000522139 C1orf127Q8N9H9 656 aa8.35□□□□□ -1.07
CNOT8-220ENST00000522139 GTPBP3Q969Y2 492 aaKnown RBP8.35□□□□□ -1.07
CNOT8-220ENST00000522139 ABHD17AQ96GS6 310 aa8.35□□□□□ -1.07
CNOT8-220ENST00000522139 GSX2Q9BZM3 304 aa8.35□□□□□ -1.07
CNOT8-220ENST00000522139 CHRDQ9H2X0 955 aa8.35□□□□□ -1.07
CNOT8-220ENST00000522139 MRS2Q9HD23 443 aa8.35□□□□□ -1.07
CNOT8-220ENST00000522139 NDFIP2Q9NV92 336 aa8.35□□□□□ -1.07
CNOT8-220ENST00000522139 ABI2Q9NYB9 513 aaPredicted RBP8.35□□□□□ -1.07
CNOT8-220ENST00000522139 TARSP26639 723 aaKnown RBP8.34□□□□□ -1.07
CNOT8-220ENST00000522139 GMPRP36959 345 aa8.34□□□□□ -1.07
CNOT8-220ENST00000522139 CCINQ13939 588 aa8.34□□□□□ -1.07
CNOT8-220ENST00000522139 LDLRAD1Q5T700 205 aa8.34□□□□□ -1.07
CNOT8-220ENST00000522139 TTC39BQ5VTQ0 682 aaPredicted RBP8.34□□□□□ -1.07
CNOT8-220ENST00000522139 CCDC74AQ96AQ1 378 aa8.34□□□□□ -1.07
CNOT8-220ENST00000522139 MARK1Q9P0L2 795 aa8.34□□□□□ -1.07
CNOT8-220ENST00000522139 EREGO14944 169 aa8.33□□□□□ -1.08
CNOT8-220ENST00000522139 SORBS3O60504 671 aa8.33□□□□□ -1.08
CNOT8-220ENST00000522139 CD33P20138 364 aa8.33□□□□□ -1.08
CNOT8-220ENST00000522139 IRS1P35568 1242 aa8.33□□□□□ -1.08
CNOT8-220ENST00000522139 LAMC2Q13753 1193 aa8.33□□□□□ -1.08
CNOT8-220ENST00000522139 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.33□□□□□ -1.08
CNOT8-220ENST00000522139 PI16Q6UXB8 463 aa8.33□□□□□ -1.08
CNOT8-220ENST00000522139 EPS8L3Q8TE67 593 aaKnown RBP8.33□□□□□ -1.08
CNOT8-220ENST00000522139 NANOS1Q8WY41 292 aaKnown RBP8.33□□□□□ -1.08
CNOT8-220ENST00000522139 GMCL1Q96IK5 515 aa8.33□□□□□ -1.08
CNOT8-220ENST00000522139 BACH2Q9BYV9 841 aa8.33□□□□□ -1.08
CNOT8-220ENST00000522139 CYP2E1P05181 493 aaPredicted RBP8.32□□□□□ -1.08
CNOT8-220ENST00000522139 RARAP10276 462 aa8.32□□□□□ -1.08
CNOT8-220ENST00000522139 GNA15P30679 374 aa8.32□□□□□ -1.08
CNOT8-220ENST00000522139 INSM1Q01101 510 aaPredicted RBP8.32□□□□□ -1.08
CNOT8-220ENST00000522139 SPEM2Q0P670 501 aa8.32□□□□□ -1.08
CNOT8-220ENST00000522139 FRMD6Q96NE9 622 aa8.32□□□□□ -1.08
CNOT8-220ENST00000522139 SLC30A3Q99726 388 aa8.32□□□□□ -1.08
CNOT8-220ENST00000522139 ZFATQ9P243 1243 aa8.32□□□□□ -1.08
CNOT8-220ENST00000522139 VTI1BQ9UEU0 232 aa8.32□□□□□ -1.08
CNOT8-220ENST00000522139 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.32□□□□□ -1.08
CNOT8-220ENST00000522139 CDC14CA4D256 554 aa8.31□□□□□ -1.08
CNOT8-220ENST00000522139 MMP20O60882 483 aa8.31□□□□□ -1.08
CNOT8-220ENST00000522139 NFKB1P19838 968 aa8.31□□□□□ -1.08
CNOT8-220ENST00000522139 CES1P23141 567 aa8.31□□□□□ -1.08
CNOT8-220ENST00000522139 RAB44Q7Z6P3 723 aaPredicted RBP8.31□□□□□ -1.08
CNOT8-220ENST00000522139 PNMA5Q96PV4 448 aa8.31□□□□□ -1.08
CNOT8-220ENST00000522139 GPR25O00155 361 aa8.3□□□□□ -1.08
CNOT8-220ENST00000522139 TCF3P15923 654 aa8.3□□□□□ -1.08
CNOT8-220ENST00000522139 SV2AQ7L0J3 742 aa8.3□□□□□ -1.08
CNOT8-220ENST00000522139 VWA5B2Q8N398 1253 aa8.3□□□□□ -1.08
CNOT8-220ENST00000522139 BHMTQ93088 406 aa8.3□□□□□ -1.08
CNOT8-220ENST00000522139 NPHS2Q9NP85 383 aa8.3□□□□□ -1.08
CNOT8-220ENST00000522139 KANSL3Q9P2N6 904 aa8.3□□□□□ -1.08
CNOT8-220ENST00000522139 ATXN7L1Q9ULK2 861 aaPredicted RBP8.3□□□□□ -1.08
CNOT8-220ENST00000522139 SPG7Q9UQ90 795 aa8.3□□□□□ -1.08
CNOT8-220ENST00000522139 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.3□□□□□ -1.08
CNOT8-220ENST00000522139 AK5Q9Y6K8 562 aa8.3□□□□□ -1.08
CNOT8-220ENST00000522139 FGFR3P22607 806 aa8.29□□□□□ -1.08
CNOT8-220ENST00000522139 ITGAEP38570 1179 aa8.29□□□□□ -1.08
CNOT8-220ENST00000522139 GALNT12Q8IXK2 581 aa8.29□□□□□ -1.08
CNOT8-220ENST00000522139 PMEPA1Q969W9 287 aa8.29□□□□□ -1.08
CNOT8-220ENST00000522139 EFCC1Q9HA90 598 aa8.29□□□□□ -1.08
CNOT8-220ENST00000522139 NLRP2Q9NX02 1062 aa8.29□□□□□ -1.08
CNOT8-220ENST00000522139 PHF24Q9UPV7 400 aa8.29□□□□□ -1.08
CNOT8-220ENST00000522139 CTBSQ01459 385 aa8.28□□□□□ -1.08
CNOT8-220ENST00000522139 FOXR1Q6PIV2 292 aa8.28□□□□□ -1.08
CNOT8-220ENST00000522139 OR13H1Q8NG92 308 aa8.28□□□□□ -1.08
CNOT8-220ENST00000522139 OSBPL7Q9BZF2 842 aa8.28□□□□□ -1.08
CNOT8-220ENST00000522139 PHF20L1A8MW92 1017 aa8.27□□□□□ -1.09
CNOT8-220ENST00000522139 GADD45BO75293 160 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms