RNA–Protein interactions for RNA: ENST00000518265.5

SRGAP3-211, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 1,799 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-211ENST00000518265 RNF123Q5XPI4 1314 aa10.15□□□□□ -0.79
SRGAP3-211ENST00000518265 HEG1Q9ULI3 1381 aa10.14□□□□□ -0.79
SRGAP3-211ENST00000518265 ARFGEF2Q9Y6D5 1785 aa10.14□□□□□ -0.79
SRGAP3-211ENST00000518265 A1BGP04217 495 aa10.14□□□□□ -0.79
SRGAP3-211ENST00000518265 SMIM5Q71RC9 77 aa10.14□□□□□ -0.79
SRGAP3-211ENST00000518265 DNAJC10Q8IXB1 793 aa10.14□□□□□ -0.79
SRGAP3-211ENST00000518265 BABAM1Q9NWV8 329 aa10.14□□□□□ -0.79
SRGAP3-211ENST00000518265 TNS1Q9HBL0 1735 aaKnown RBP10.14□□□□□ -0.79
SRGAP3-211ENST00000518265 F6X3S4 739 aa10.14□□□□□ -0.79
SRGAP3-211ENST00000518265 NCLP19338 710 aaKnown RBP10.14□□□□□ -0.79
SRGAP3-211ENST00000518265 TMEM259Q4ZIN3 620 aa10.14□□□□□ -0.79
SRGAP3-211ENST00000518265 PPP2R2DQ66LE6 453 aa10.14□□□□□ -0.79
SRGAP3-211ENST00000518265 BRD1O95696 1058 aa10.13□□□□□ -0.79
SRGAP3-211ENST00000518265 AIMP1Q12904 312 aaKnown RBP10.13□□□□□ -0.79
SRGAP3-211ENST00000518265 PBXIP1Q96AQ6 731 aa10.13□□□□□ -0.79
SRGAP3-211ENST00000518265 NUP98P52948 1817 aa10.13□□□□□ -0.79
SRGAP3-211ENST00000518265 NUP188Q5SRE5 1749 aa10.12□□□□□ -0.79
SRGAP3-211ENST00000518265 PALLDQ8WX93 1383 aa10.12□□□□□ -0.79
SRGAP3-211ENST00000518265 SNRPA1P09661 255 aaKnown RBP10.12□□□□□ -0.79
SRGAP3-211ENST00000518265 TRIM27P14373 513 aa10.12□□□□□ -0.79
SRGAP3-211ENST00000518265 ALDH1L2Q3SY69 923 aa10.12□□□□□ -0.79
SRGAP3-211ENST00000518265 ZNF592Q92610 1267 aa10.12□□□□□ -0.79
SRGAP3-211ENST00000518265 N4BP2Q86UW6 1770 aaPredicted RBP10.12□□□□□ -0.79
SRGAP3-211ENST00000518265 CT47B1P0C2W7 299 aaPredicted RBP10.11□□□□□ -0.79
SRGAP3-211ENST00000518265 ATP6V1AP38606 617 aa10.11□□□□□ -0.79
SRGAP3-211ENST00000518265 KCNA1Q09470 495 aa10.11□□□□□ -0.79
SRGAP3-211ENST00000518265 ITPK1Q13572 414 aa10.11□□□□□ -0.79
SRGAP3-211ENST00000518265 CSPP1Q1MSJ5 1256 aa10.11□□□□□ -0.79
SRGAP3-211ENST00000518265 CCDC30Q5VVM6 783 aa10.11□□□□□ -0.79
SRGAP3-211ENST00000518265 STK31Q9BXU1 1019 aa10.11□□□□□ -0.79
SRGAP3-211ENST00000518265 TUBGCP6Q96RT7 1819 aa10.11□□□□□ -0.79
SRGAP3-211ENST00000518265 NBPF26B4DH59 902 aa10.11□□□□□ -0.79
SRGAP3-211ENST00000518265 NBPF14Q5TI25 921 aa10.11□□□□□ -0.79
SRGAP3-211ENST00000518265 ZKSCAN2Q63HK3 967 aa10.11□□□□□ -0.79
SRGAP3-211ENST00000518265 NBPF10Q6P3W6 841 aaKnown RBP10.11□□□□□ -0.79
SRGAP3-211ENST00000518265 NBPF15Q8N660 670 aa10.11□□□□□ -0.79
SRGAP3-211ENST00000518265 PXYLP1Q8TE99 480 aa10.11□□□□□ -0.79
SRGAP3-211ENST00000518265 LOC102724428A0A0B4J2F2 783 aa10.1□□□□□ -0.79
SRGAP3-211ENST00000518265 SIK1P57059 783 aa10.1□□□□□ -0.79
SRGAP3-211ENST00000518265 FKBP5Q13451 457 aaPredicted RBP10.1□□□□□ -0.79
SRGAP3-211ENST00000518265 SLC4A10Q6U841 1118 aa10.1□□□□□ -0.79
SRGAP3-211ENST00000518265 ATF7IPQ6VMQ6 1270 aa10.1□□□□□ -0.79
SRGAP3-211ENST00000518265 TMEM57Q8N5G2 664 aa10.1□□□□□ -0.79
SRGAP3-211ENST00000518265 QPCTQ16769 361 aa10.09□□□□□ -0.79
SRGAP3-211ENST00000518265 FAM196AQ6ZSG2 479 aa10.09□□□□□ -0.79
SRGAP3-211ENST00000518265 RIC3Q7Z5B4 369 aa10.09□□□□□ -0.79
SRGAP3-211ENST00000518265 FTSJ3Q8IY81 847 aaKnown RBP10.09□□□□□ -0.79
SRGAP3-211ENST00000518265 IVNS1ABPQ9Y6Y0 642 aa10.09□□□□□ -0.79
SRGAP3-211ENST00000518265 C19orf67A6NJJ6 358 aa10.09□□□□□ -0.79
SRGAP3-211ENST00000518265 PADI6Q6TGC4 694 aa10.09□□□□□ -0.79
SRGAP3-211ENST00000518265 ITPRIPQ8IWB1 547 aa10.09□□□□□ -0.79
SRGAP3-211ENST00000518265 DZIP1LQ8IYY4 767 aaKnown RBP10.09□□□□□ -0.79
SRGAP3-211ENST00000518265 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.09□□□□□ -0.79
SRGAP3-211ENST00000518265 LINC00116Q8NCU8 138 aa10.09□□□□□ -0.79
SRGAP3-211ENST00000518265 XAGE3Q8WTP9 111 aa10.09□□□□□ -0.79
SRGAP3-211ENST00000518265 ZBTB1Q9Y2K1 713 aa10.09□□□□□ -0.79
SRGAP3-211ENST00000518265 ADGRG1Q9Y653 693 aa10.09□□□□□ -0.79
SRGAP3-211ENST00000518265 ANKRD36CQ5JPF3 1778 aa10.08□□□□□ -0.8
SRGAP3-211ENST00000518265 CASZ1Q86V15 1759 aa10.08□□□□□ -0.8
SRGAP3-211ENST00000518265 UBR3Q6ZT12 1888 aa10.08□□□□□ -0.8
SRGAP3-211ENST00000518265 CYP19A1P11511 503 aaPredicted RBP10.08□□□□□ -0.8
SRGAP3-211ENST00000518265 TMED8Q6PL24 325 aaPredicted RBP10.08□□□□□ -0.8
SRGAP3-211ENST00000518265 TTLL7Q6ZT98 887 aa10.08□□□□□ -0.8
SRGAP3-211ENST00000518265 COPS6Q7L5N1 327 aa10.08□□□□□ -0.8
SRGAP3-211ENST00000518265 DBF4Q9UBU7 674 aaPredicted RBP10.08□□□□□ -0.8
SRGAP3-211ENST00000518265 KIF16BQ96L93 1317 aa10.08□□□□□ -0.8
SRGAP3-211ENST00000518265 RREB1Q92766 1687 aa10.08□□□□□ -0.8
SRGAP3-211ENST00000518265 C4AP0C0L4 1744 aa10.08□□□□□ -0.8
SRGAP3-211ENST00000518265 C4BP0C0L5 1744 aa10.08□□□□□ -0.8
SRGAP3-211ENST00000518265 ZNF831Q5JPB2 1677 aa10.07□□□□□ -0.8
SRGAP3-211ENST00000518265 HOXB7P09629 217 aa10.07□□□□□ -0.8
SRGAP3-211ENST00000518265 IRX5P78411 483 aaPredicted RBP10.07□□□□□ -0.8
SRGAP3-211ENST00000518265 AMIGO3Q86WK7 504 aa10.07□□□□□ -0.8
SRGAP3-211ENST00000518265 CNPY4Q8N129 248 aa10.07□□□□□ -0.8
SRGAP3-211ENST00000518265 SPIRE2Q8WWL2 714 aa10.07□□□□□ -0.8
SRGAP3-211ENST00000518265 DDX21Q9NR30 783 aaKnown RBP eCLIP10.07□□□□□ -0.8
SRGAP3-211ENST00000518265 LRRC4BQ9NT99 713 aa10.07□□□□□ -0.8
SRGAP3-211ENST00000518265 USTQ9Y2C2 406 aa10.07□□□□□ -0.8
SRGAP3-211ENST00000518265 PCDHGA10Q9Y5H3 936 aa10.07□□□□□ -0.8
SRGAP3-211ENST00000518265 CICQ96RK0 1608 aaPredicted RBP10.07□□□□□ -0.8
SRGAP3-211ENST00000518265 ADCY9O60503 1353 aa10.06□□□□□ -0.8
SRGAP3-211ENST00000518265 PI4KAP2A4QPH2 592 aa10.06□□□□□ -0.8
SRGAP3-211ENST00000518265 APBA3O96018 575 aa10.06□□□□□ -0.8
SRGAP3-211ENST00000518265 CRKLP46109 303 aaKnown RBP10.06□□□□□ -0.8
SRGAP3-211ENST00000518265 B4GALNT3Q6L9W6 998 aa10.06□□□□□ -0.8
SRGAP3-211ENST00000518265 LRP10Q7Z4F1 713 aa10.06□□□□□ -0.8
SRGAP3-211ENST00000518265 PI4KAP1Q8N8J0 262 aa10.06□□□□□ -0.8
SRGAP3-211ENST00000518265 ZBTB3Q9H5J0 574 aa10.06□□□□□ -0.8
SRGAP3-211ENST00000518265 CCNL1Q9UK58 526 aaPredicted RBP10.06□□□□□ -0.8
SRGAP3-211ENST00000518265 PATL2C9JE40 543 aaKnown RBP10.06□□□□□ -0.8
SRGAP3-211ENST00000518265 AP1G2O75843 785 aa10.06□□□□□ -0.8
SRGAP3-211ENST00000518265 PHF14O94880 888 aa10.06□□□□□ -0.8
SRGAP3-211ENST00000518265 OATP04181 439 aa10.06□□□□□ -0.8
SRGAP3-211ENST00000518265 JARID2Q92833 1246 aaPredicted RBP10.06□□□□□ -0.8
SRGAP3-211ENST00000518265 MAP3K2Q9Y2U5 619 aa10.06□□□□□ -0.8
SRGAP3-211ENST00000518265 BCORQ6W2J9 1755 aa10.05□□□□□ -0.8
SRGAP3-211ENST00000518265 ABCC4O15439 1325 aa10.05□□□□□ -0.8
SRGAP3-211ENST00000518265 IPO8O15397 1037 aaKnown RBP10.05□□□□□ -0.8
SRGAP3-211ENST00000518265 INTS5Q6P9B9 1019 aaKnown RBP10.05□□□□□ -0.8
SRGAP3-211ENST00000518265 SMARCC1Q92922 1105 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms