RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 DDX42Q86XP3 938 aaKnown RBP eCLIP5.12□□□□□ -1.59
RNU4-60P-201ENST00000517239 SLC39A7Q92504 469 aa5.12□□□□□ -1.59
RNU4-60P-201ENST00000517239 THAP11Q96EK4 314 aa5.12□□□□□ -1.59
RNU4-60P-201ENST00000517239 ARPC5LQ9BPX5 153 aa5.12□□□□□ -1.59
RNU4-60P-201ENST00000517239 FAM126AQ9BYI3 521 aaPredicted RBP5.12□□□□□ -1.59
RNU4-60P-201ENST00000517239 RBSNQ9H1K0 784 aa5.12□□□□□ -1.59
RNU4-60P-201ENST00000517239 ARNT2Q9HBZ2 717 aa5.12□□□□□ -1.59
RNU4-60P-201ENST00000517239 FBXO9Q9UK97 447 aaPredicted RBP5.12□□□□□ -1.59
RNU4-60P-201ENST00000517239 PDPK1O15530 556 aa5.11□□□□□ -1.59
RNU4-60P-201ENST00000517239 ASMTLO95671 621 aa5.11□□□□□ -1.59
RNU4-60P-201ENST00000517239 ATF3P18847 181 aa5.11□□□□□ -1.59
RNU4-60P-201ENST00000517239 SOX9P48436 509 aa5.11□□□□□ -1.59
RNU4-60P-201ENST00000517239 SCNN1DP51172 638 aa5.11□□□□□ -1.59
RNU4-60P-201ENST00000517239 CLCN6P51797 869 aa5.11□□□□□ -1.59
RNU4-60P-201ENST00000517239 TTF1Q15361 905 aaPredicted RBP5.11□□□□□ -1.59
RNU4-60P-201ENST00000517239 C11orf91Q3C1V1 193 aa5.11□□□□□ -1.59
RNU4-60P-201ENST00000517239 DALRD3Q5D0E6 543 aaKnown RBP5.11□□□□□ -1.59
RNU4-60P-201ENST00000517239 USPL1Q5W0Q7 1092 aa5.11□□□□□ -1.59
RNU4-60P-201ENST00000517239 NXPE4Q6UWF7 544 aa5.11□□□□□ -1.59
RNU4-60P-201ENST00000517239 SLC9A9Q8IVB4 645 aa5.11□□□□□ -1.59
RNU4-60P-201ENST00000517239 ETFBKMTQ8IXQ9 262 aa5.11□□□□□ -1.59
RNU4-60P-201ENST00000517239 STAG2Q8N3U4 1231 aa5.11□□□□□ -1.59
RNU4-60P-201ENST00000517239 CCDC24Q8N4L8 307 aa5.11□□□□□ -1.59
RNU4-60P-201ENST00000517239 CELF2-AS1Q8N7Q2 184 aa5.11□□□□□ -1.59
RNU4-60P-201ENST00000517239 GPR152Q8TDT2 470 aa5.11□□□□□ -1.59
RNU4-60P-201ENST00000517239 ZNF296Q8WUU4 475 aaPredicted RBP5.11□□□□□ -1.59
RNU4-60P-201ENST00000517239 CCDC74AQ96AQ1 378 aa5.11□□□□□ -1.59
RNU4-60P-201ENST00000517239 NUDT16Q96DE0 195 aaKnown RBP5.11□□□□□ -1.59
RNU4-60P-201ENST00000517239 MYO19Q96H55 970 aa5.11□□□□□ -1.59
RNU4-60P-201ENST00000517239 RSRP1Q9BUV0 290 aa5.11□□□□□ -1.59
RNU4-60P-201ENST00000517239 SRRTQ9BXP5 876 aaKnown RBP5.11□□□□□ -1.59
RNU4-60P-201ENST00000517239 UNC93B1Q9H1C4 597 aa5.11□□□□□ -1.59
RNU4-60P-201ENST00000517239 CHST12Q9NRB3 414 aa5.11□□□□□ -1.59
RNU4-60P-201ENST00000517239 MSRB2Q9Y3D2 182 aa5.11□□□□□ -1.59
RNU4-60P-201ENST00000517239 RPS6KL1Q9Y6S9 549 aa5.11□□□□□ -1.59
RNU4-60P-201ENST00000517239 WASLO00401 505 aaPredicted RBP5.1□□□□□ -1.59
RNU4-60P-201ENST00000517239 IFRD1O00458 451 aaPredicted RBP5.1□□□□□ -1.59
RNU4-60P-201ENST00000517239 DXOO77932 396 aaKnown RBP5.1□□□□□ -1.59
RNU4-60P-201ENST00000517239 TRIM37O94972 964 aa5.1□□□□□ -1.59
RNU4-60P-201ENST00000517239 FOSP01100 380 aaPredicted RBP5.1□□□□□ -1.59
RNU4-60P-201ENST00000517239 INHAP05111 366 aa5.1□□□□□ -1.59
RNU4-60P-201ENST00000517239 EPHB1P54762 984 aa5.1□□□□□ -1.59
RNU4-60P-201ENST00000517239 PPP4CP60510 307 aa5.1□□□□□ -1.59
RNU4-60P-201ENST00000517239 PWP1Q13610 501 aa5.1□□□□□ -1.59
RNU4-60P-201ENST00000517239 COL9A2Q14055 689 aaPredicted RBP5.1□□□□□ -1.59
RNU4-60P-201ENST00000517239 TCEA2Q15560 299 aa5.1□□□□□ -1.59
RNU4-60P-201ENST00000517239 VPS72Q15906 364 aa5.1□□□□□ -1.59
RNU4-60P-201ENST00000517239 CT47A1Q5JQC4 288 aaPredicted RBP5.1□□□□□ -1.59
RNU4-60P-201ENST00000517239 PTCRAQ6ISU1 281 aaPredicted RBP5.1□□□□□ -1.59
RNU4-60P-201ENST00000517239 KSR2Q6VAB6 950 aa5.1□□□□□ -1.59
RNU4-60P-201ENST00000517239 SH3RF1Q7Z6J0 888 aa5.1□□□□□ -1.59
RNU4-60P-201ENST00000517239 BPHLQ86WA6 291 aaPredicted RBP5.1□□□□□ -1.59
RNU4-60P-201ENST00000517239 SEPT12Q8IYM1 358 aa5.1□□□□□ -1.59
RNU4-60P-201ENST00000517239 SAMD3Q8N6K7 520 aa5.1□□□□□ -1.59
RNU4-60P-201ENST00000517239 CHAC2Q8WUX2 184 aa5.1□□□□□ -1.59
RNU4-60P-201ENST00000517239 FOXJ1Q92949 421 aa5.1□□□□□ -1.59
RNU4-60P-201ENST00000517239 IFT43Q96FT9 208 aa5.1□□□□□ -1.59
RNU4-60P-201ENST00000517239 SLC39A13Q96H72 371 aa5.1□□□□□ -1.59
RNU4-60P-201ENST00000517239 NAP1L5Q96NT1 182 aaPredicted RBP5.1□□□□□ -1.59
RNU4-60P-201ENST00000517239 MTA3Q9BTC8 594 aa5.1□□□□□ -1.59
RNU4-60P-201ENST00000517239 CHMP3Q9Y3E7 222 aa5.1□□□□□ -1.59
RNU4-60P-201ENST00000517239 WASHC2CQ9Y4E1 1318 aa5.1□□□□□ -1.59
RNU4-60P-201ENST00000517239 CD2APQ9Y5K6 639 aa5.1□□□□□ -1.59
RNU4-60P-201ENST00000517239 KDM2BQ8NHM5 1336 aa5.09□□□□□ -1.59
RNU4-60P-201ENST00000517239 SHTN1A0MZ66 631 aa5.09□□□□□ -1.59
RNU4-60P-201ENST00000517239 ALG1L2C9J202 215 aa5.09□□□□□ -1.59
RNU4-60P-201ENST00000517239 NRDCO43847 1150 aa5.09□□□□□ -1.59
RNU4-60P-201ENST00000517239 MYCLP1P12525 358 aaPredicted RBP5.09□□□□□ -1.59
RNU4-60P-201ENST00000517239 BDNFP23560 247 aa5.09□□□□□ -1.59
RNU4-60P-201ENST00000517239 NFKB2Q00653 900 aa5.09□□□□□ -1.59
RNU4-60P-201ENST00000517239 DGKZQ13574 1117 aa5.09□□□□□ -1.59
RNU4-60P-201ENST00000517239 RASGRF1Q13972 1273 aa5.09□□□□□ -1.59
RNU4-60P-201ENST00000517239 C2orf27AQ580R0 203 aa5.09□□□□□ -1.59
RNU4-60P-201ENST00000517239 TNNI3KQ59H18 835 aa5.09□□□□□ -1.59
RNU4-60P-201ENST00000517239 TTC39BQ5VTQ0 682 aaPredicted RBP5.09□□□□□ -1.59
RNU4-60P-201ENST00000517239 SLC4A10Q6U841 1118 aa5.09□□□□□ -1.59
RNU4-60P-201ENST00000517239 MAMSTRQ6ZN01 415 aa5.09□□□□□ -1.59
RNU4-60P-201ENST00000517239 CCDC81Q6ZN84 652 aa5.09□□□□□ -1.59
RNU4-60P-201ENST00000517239 AMOTL1Q8IY63 956 aa5.09□□□□□ -1.59
RNU4-60P-201ENST00000517239 FAM160A2Q8N612 972 aaPredicted RBP5.09□□□□□ -1.59
RNU4-60P-201ENST00000517239 UBR7Q8N806 425 aa5.09□□□□□ -1.59
RNU4-60P-201ENST00000517239 THAP3Q8WTV1 239 aaPredicted RBP5.09□□□□□ -1.59
RNU4-60P-201ENST00000517239 BAP1Q92560 729 aa5.09□□□□□ -1.59
RNU4-60P-201ENST00000517239 ZNF512BQ96KM6 892 aaPredicted RBP5.09□□□□□ -1.59
RNU4-60P-201ENST00000517239 SENP7Q9BQF6 1050 aa5.09□□□□□ -1.59
RNU4-60P-201ENST00000517239 NOC4LQ9BVI4 516 aaKnown RBP5.09□□□□□ -1.59
RNU4-60P-201ENST00000517239 BCO2Q9BYV7 579 aa5.09□□□□□ -1.59
RNU4-60P-201ENST00000517239 ZSWIM6Q9HCJ5 1215 aa5.09□□□□□ -1.59
RNU4-60P-201ENST00000517239 KLK14Q9P0G3 267 aa5.09□□□□□ -1.59
RNU4-60P-201ENST00000517239 SCHIP1Q9P0W5 487 aaPredicted RBP5.09□□□□□ -1.59
RNU4-60P-201ENST00000517239 PCDH10Q9P2E7 1040 aa5.09□□□□□ -1.59
RNU4-60P-201ENST00000517239 SWAP70Q9UH65 585 aa5.09□□□□□ -1.59
RNU4-60P-201ENST00000517239 GADD45BO75293 160 aaPredicted RBP5.08□□□□□ -1.6
RNU4-60P-201ENST00000517239 FGAP02671 866 aa5.08□□□□□ -1.6
RNU4-60P-201ENST00000517239 HOXB3P14651 431 aaPredicted RBP5.08□□□□□ -1.6
RNU4-60P-201ENST00000517239 CD53P19397 219 aa5.08□□□□□ -1.6
RNU4-60P-201ENST00000517239 POU3F3P20264 500 aaPredicted RBP5.08□□□□□ -1.6
RNU4-60P-201ENST00000517239 FOXK2Q01167 660 aa5.08□□□□□ -1.6
RNU4-60P-201ENST00000517239 SEPT6Q14141 434 aa5.08□□□□□ -1.6
RNU4-60P-201ENST00000517239 DDR2Q16832 855 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms