RNA–Protein interactions for RNA: ENST00000516329.1

SNORA40.12-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 111 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.12-201ENST00000516329 NAGPAQ9UK23 515 aa6.36□□□□□ -1.39
SNORA40.12-201ENST00000516329 KCNMB2Q9Y691 235 aa6.36□□□□□ -1.39
SNORA40.12-201ENST00000516329 PIK3R2O00459 728 aa6.35□□□□□ -1.39
SNORA40.12-201ENST00000516329 MTMR3Q13615 1198 aa6.35□□□□□ -1.39
SNORA40.12-201ENST00000516329 GPAT2Q6NUI2 795 aa6.35□□□□□ -1.39
SNORA40.12-201ENST00000516329 DHX32Q7L7V1 743 aaKnown RBP6.35□□□□□ -1.39
SNORA40.12-201ENST00000516329 ATCAYQ86WG3 371 aa6.35□□□□□ -1.39
SNORA40.12-201ENST00000516329 ABTB2Q8N961 1025 aa6.35□□□□□ -1.39
SNORA40.12-201ENST00000516329 HELQQ8TDG4 1101 aa6.35□□□□□ -1.39
SNORA40.12-201ENST00000516329 GPR152Q8TDT2 470 aa6.35□□□□□ -1.39
SNORA40.12-201ENST00000516329 GTF3C2Q8WUA4 911 aaPredicted RBP6.35□□□□□ -1.39
SNORA40.12-201ENST00000516329 NUDT8Q8WV74 236 aa6.35□□□□□ -1.39
SNORA40.12-201ENST00000516329 TRIM11Q96F44 468 aa6.35□□□□□ -1.39
SNORA40.12-201ENST00000516329 EFCC1Q9HA90 598 aa6.35□□□□□ -1.39
SNORA40.12-201ENST00000516329 MAP3K6O95382 1288 aa6.34□□□□□ -1.39
SNORA40.12-201ENST00000516329 CPB1P15086 417 aa6.34□□□□□ -1.39
SNORA40.12-201ENST00000516329 FAM35AQ86V20 835 aa6.34□□□□□ -1.39
SNORA40.12-201ENST00000516329 MICALL1Q8N3F8 863 aa6.34□□□□□ -1.39
SNORA40.12-201ENST00000516329 PIK3R5Q8WYR1 880 aa6.34□□□□□ -1.39
SNORA40.12-201ENST00000516329 PLVAPQ9BX97 442 aa6.34□□□□□ -1.39
SNORA40.12-201ENST00000516329 JPH1Q9HDC5 661 aaPredicted RBP6.34□□□□□ -1.39
SNORA40.12-201ENST00000516329 UBAP1LF5GYI3 381 aa6.33□□□□□ -1.4
SNORA40.12-201ENST00000516329 MPSTP25325 297 aa6.33□□□□□ -1.4
SNORA40.12-201ENST00000516329 PLA2G4EQ3MJ16 856 aa6.33□□□□□ -1.4
SNORA40.12-201ENST00000516329 PHLDB3Q6NSJ2 640 aa6.33□□□□□ -1.4
SNORA40.12-201ENST00000516329 PSAPL1Q6NUJ1 521 aa6.33□□□□□ -1.4
SNORA40.12-201ENST00000516329 HFE2Q6ZVN8 426 aa6.33□□□□□ -1.4
SNORA40.12-201ENST00000516329 RETREG2Q8NC44 543 aa6.33□□□□□ -1.4
SNORA40.12-201ENST00000516329 FAM13BQ9NYF5 915 aa6.33□□□□□ -1.4
SNORA40.12-201ENST00000516329 NOP53Q9NZM5 478 aaKnown RBP6.33□□□□□ -1.4
SNORA40.12-201ENST00000516329 USTQ9Y2C2 406 aa6.33□□□□□ -1.4
SNORA40.12-201ENST00000516329 KRBA1A5PL33 1030 aa6.32□□□□□ -1.4
SNORA40.12-201ENST00000516329 ZBTB42B2RXF5 422 aa6.32□□□□□ -1.4
SNORA40.12-201ENST00000516329 FAM229AH3BQW9 127 aa6.32□□□□□ -1.4
SNORA40.12-201ENST00000516329 ABL1P00519 1130 aa6.32□□□□□ -1.4
SNORA40.12-201ENST00000516329 EGFRP00533 1210 aa6.32□□□□□ -1.4
SNORA40.12-201ENST00000516329 ZNF211Q13398 564 aaPredicted RBP6.32□□□□□ -1.4
SNORA40.12-201ENST00000516329 C20orf204Q6ZNR8 217 aa6.32□□□□□ -1.4
SNORA40.12-201ENST00000516329 NSUN5Q96P11 429 aaKnown RBP6.32□□□□□ -1.4
SNORA40.12-201ENST00000516329 ANO2Q9NQ90 1003 aa6.32□□□□□ -1.4
SNORA40.12-201ENST00000516329 MMP20O60882 483 aa6.31□□□□□ -1.4
SNORA40.12-201ENST00000516329 LILRB5O75023 590 aa6.31□□□□□ -1.4
SNORA40.12-201ENST00000516329 PSAPP07602 524 aa6.31□□□□□ -1.4
SNORA40.12-201ENST00000516329 EIF2AK2P19525 551 aaKnown RBP6.31□□□□□ -1.4
SNORA40.12-201ENST00000516329 GPLD1P80108 840 aa6.31□□□□□ -1.4
SNORA40.12-201ENST00000516329 PERM1Q5SV97 790 aa6.31□□□□□ -1.4
SNORA40.12-201ENST00000516329 NLRP13Q86W25 1043 aa6.31□□□□□ -1.4
SNORA40.12-201ENST00000516329 TRPM4Q8TD43 1214 aa6.31□□□□□ -1.4
SNORA40.12-201ENST00000516329 EDEM1Q92611 657 aa6.31□□□□□ -1.4
SNORA40.12-201ENST00000516329 NUDT16Q96DE0 195 aaKnown RBP6.31□□□□□ -1.4
SNORA40.12-201ENST00000516329 C11orf16Q9NQ32 467 aa6.31□□□□□ -1.4
SNORA40.12-201ENST00000516329 TLR7Q9NYK1 1049 aaKnown RBP6.31□□□□□ -1.4
SNORA40.12-201ENST00000516329 RGS9O75916 674 aaPredicted RBP6.3□□□□□ -1.4
SNORA40.12-201ENST00000516329 ITGB2P05107 769 aa6.3□□□□□ -1.4
SNORA40.12-201ENST00000516329 NID1P14543 1247 aa6.3□□□□□ -1.4
SNORA40.12-201ENST00000516329 ARID4AP29374 1257 aaPredicted RBP6.3□□□□□ -1.4
SNORA40.12-201ENST00000516329 EIF1AXP47813 144 aaKnown RBP6.3□□□□□ -1.4
SNORA40.12-201ENST00000516329 PLAURQ03405 335 aa6.3□□□□□ -1.4
SNORA40.12-201ENST00000516329 DNM1Q05193 864 aaKnown RBP6.3□□□□□ -1.4
SNORA40.12-201ENST00000516329 COL9A3Q14050 684 aaPredicted RBP6.3□□□□□ -1.4
SNORA40.12-201ENST00000516329 NOM1Q5C9Z4 860 aaKnown RBP6.3□□□□□ -1.4
SNORA40.12-201ENST00000516329 ELMSAN1Q6PJG2 1045 aa6.3□□□□□ -1.4
SNORA40.12-201ENST00000516329 LPIN3Q9BQK8 851 aa6.3□□□□□ -1.4
SNORA40.12-201ENST00000516329 PRDM6Q9NQX0 595 aa6.3□□□□□ -1.4
SNORA40.12-201ENST00000516329 MTMR7Q9Y216 660 aa6.3□□□□□ -1.4
SNORA40.12-201ENST00000516329 J3QW42 95 aa6.29□□□□□ -1.4
SNORA40.12-201ENST00000516329 NRLP54845 237 aa6.29□□□□□ -1.4
SNORA40.12-201ENST00000516329 AAMPQ13685 434 aa6.29□□□□□ -1.4
SNORA40.12-201ENST00000516329 PCSK7Q16549 785 aa6.29□□□□□ -1.4
SNORA40.12-201ENST00000516329 B4GALNT3Q6L9W6 998 aa6.29□□□□□ -1.4
SNORA40.12-201ENST00000516329 ALYREFQ86V81 257 aaKnown RBP6.29□□□□□ -1.4
SNORA40.12-201ENST00000516329 FNDC3AQ9Y2H6 1198 aaKnown RBP6.29□□□□□ -1.4
SNORA40.12-201ENST00000516329 A6NHS1 94 aa6.28□□□□□ -1.4
SNORA40.12-201ENST00000516329 SPDYE3A6NKU9 549 aa6.28□□□□□ -1.4
SNORA40.12-201ENST00000516329 PDGFAP04085 211 aa6.28□□□□□ -1.4
SNORA40.12-201ENST00000516329 SERPINB4P48594 390 aa6.28□□□□□ -1.4
SNORA40.12-201ENST00000516329 AFF1P51825 1210 aaKnown RBP6.28□□□□□ -1.4
SNORA40.12-201ENST00000516329 PRRT3Q5FWE3 981 aa6.28□□□□□ -1.4
SNORA40.12-201ENST00000516329 TRAPPC3LQ5T215 181 aa6.28□□□□□ -1.4
SNORA40.12-201ENST00000516329 ZNF438Q7Z4V0 828 aa6.28□□□□□ -1.4
SNORA40.12-201ENST00000516329 SMG9Q9H0W8 520 aaKnown RBP6.28□□□□□ -1.4
SNORA40.12-201ENST00000516329 SPATA31C1P0DKV0 1188 aa6.27□□□□□ -1.41
SNORA40.12-201ENST00000516329 CHRNA4P43681 627 aa6.27□□□□□ -1.41
SNORA40.12-201ENST00000516329 C8orf34Q49A92 452 aa6.27□□□□□ -1.41
SNORA40.12-201ENST00000516329 TTC39BQ5VTQ0 682 aaPredicted RBP6.27□□□□□ -1.41
SNORA40.12-201ENST00000516329 SPOCK3Q9BQ16 436 aa6.27□□□□□ -1.41
SNORA40.12-201ENST00000516329 TMEM63CQ9P1W3 806 aa6.27□□□□□ -1.41
SNORA40.12-201ENST00000516329 LOC102724428A0A0B4J2F2 783 aa6.26□□□□□ -1.41
SNORA40.12-201ENST00000516329 C1QTNF9BB2RNN3 333 aa6.26□□□□□ -1.41
SNORA40.12-201ENST00000516329 H3BRB1 525 aa6.26□□□□□ -1.41
SNORA40.12-201ENST00000516329 MSTNO14793 375 aa6.26□□□□□ -1.41
SNORA40.12-201ENST00000516329 GHRHP01286 108 aa6.26□□□□□ -1.41
SNORA40.12-201ENST00000516329 CYP2E1P05181 493 aaPredicted RBP6.26□□□□□ -1.41
SNORA40.12-201ENST00000516329 PCSK2P16519 638 aa6.26□□□□□ -1.41
SNORA40.12-201ENST00000516329 MZF1P28698 734 aaPredicted RBP6.26□□□□□ -1.41
SNORA40.12-201ENST00000516329 SOX18P35713 384 aa6.26□□□□□ -1.41
SNORA40.12-201ENST00000516329 SIK1P57059 783 aa6.26□□□□□ -1.41
SNORA40.12-201ENST00000516329 COL13A1Q5TAT6 717 aaPredicted RBP6.26□□□□□ -1.41
SNORA40.12-201ENST00000516329 DMRTC2Q8IXT2 367 aaPredicted RBP6.26□□□□□ -1.41
SNORA40.12-201ENST00000516329 TTC16Q8NEE8 873 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms