RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 CCDC74AQ96AQ1 378 aa5.35□□□□□ -1.55
RNU6-390P-201ENST00000516259 WWC3Q9ULE0 1092 aa5.35□□□□□ -1.55
RNU6-390P-201ENST00000516259 ATXN7O15265 892 aaPredicted RBP5.34□□□□□ -1.55
RNU6-390P-201ENST00000516259 EIF4BP23588 611 aaKnown RBP5.34□□□□□ -1.55
RNU6-390P-201ENST00000516259 ZC3H6P61129 1189 aaKnown RBP5.34□□□□□ -1.55
RNU6-390P-201ENST00000516259 TNP2Q05952 138 aa5.34□□□□□ -1.55
RNU6-390P-201ENST00000516259 CCINQ13939 588 aa5.34□□□□□ -1.55
RNU6-390P-201ENST00000516259 TSNAXIP1Q2TAA8 658 aa5.34□□□□□ -1.55
RNU6-390P-201ENST00000516259 GSX2Q9BZM3 304 aa5.34□□□□□ -1.55
RNU6-390P-201ENST00000516259 CHRDQ9H2X0 955 aa5.34□□□□□ -1.55
RNU6-390P-201ENST00000516259 RUBCNLQ9H714 662 aa5.34□□□□□ -1.55
RNU6-390P-201ENST00000516259 C12orf49Q9H741 205 aa5.34□□□□□ -1.55
RNU6-390P-201ENST00000516259 NLRP2Q9NX02 1062 aa5.34□□□□□ -1.55
RNU6-390P-201ENST00000516259 FAM8A1Q9UBU6 413 aa5.34□□□□□ -1.55
RNU6-390P-201ENST00000516259 USP31Q70CQ4 1352 aa5.33□□□□□ -1.56
RNU6-390P-201ENST00000516259 KIF4AO95239 1232 aa5.33□□□□□ -1.56
RNU6-390P-201ENST00000516259 EDN3P14138 238 aa5.33□□□□□ -1.56
RNU6-390P-201ENST00000516259 FANCCQ00597 558 aa5.33□□□□□ -1.56
RNU6-390P-201ENST00000516259 PTSQ03393 145 aa5.33□□□□□ -1.56
RNU6-390P-201ENST00000516259 PTPN12Q05209 780 aaKnown RBP5.33□□□□□ -1.56
RNU6-390P-201ENST00000516259 TTC39BQ5VTQ0 682 aaPredicted RBP5.33□□□□□ -1.56
RNU6-390P-201ENST00000516259 METTL16Q86W50 562 aaKnown RBP5.33□□□□□ -1.56
RNU6-390P-201ENST00000516259 TMEM87AQ8NBN3 555 aa5.33□□□□□ -1.56
RNU6-390P-201ENST00000516259 OR13H1Q8NG92 308 aa5.33□□□□□ -1.56
RNU6-390P-201ENST00000516259 TRIM47Q96LD4 638 aa5.33□□□□□ -1.56
RNU6-390P-201ENST00000516259 NUCKS1Q9H1E3 243 aaKnown RBP5.33□□□□□ -1.56
RNU6-390P-201ENST00000516259 ZFYVE1Q9HBF4 777 aa5.33□□□□□ -1.56
RNU6-390P-201ENST00000516259 TMEM63CQ9P1W3 806 aa5.33□□□□□ -1.56
RNU6-390P-201ENST00000516259 VTI1BQ9UEU0 232 aa5.33□□□□□ -1.56
RNU6-390P-201ENST00000516259 ATXN7L1Q9ULK2 861 aaPredicted RBP5.33□□□□□ -1.56
RNU6-390P-201ENST00000516259 TRAK1Q9UPV9 953 aa5.33□□□□□ -1.56
RNU6-390P-201ENST00000516259 A6NHS1 94 aa5.32□□□□□ -1.56
RNU6-390P-201ENST00000516259 THBS1P07996 1170 aa5.32□□□□□ -1.56
RNU6-390P-201ENST00000516259 XRCC5P13010 732 aaKnown RBP5.32□□□□□ -1.56
RNU6-390P-201ENST00000516259 HDLBPQ00341 1268 aaKnown RBP5.32□□□□□ -1.56
RNU6-390P-201ENST00000516259 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.32□□□□□ -1.56
RNU6-390P-201ENST00000516259 PRPF40BQ6NWY9 871 aaKnown RBP5.32□□□□□ -1.56
RNU6-390P-201ENST00000516259 RNF34Q969K3 372 aa5.32□□□□□ -1.56
RNU6-390P-201ENST00000516259 GAS2L1Q99501 681 aaPredicted RBP5.32□□□□□ -1.56
RNU6-390P-201ENST00000516259 SUV39H2Q9H5I1 410 aa5.32□□□□□ -1.56
RNU6-390P-201ENST00000516259 GPAMQ9HCL2 828 aa5.32□□□□□ -1.56
RNU6-390P-201ENST00000516259 MARK1Q9P0L2 795 aa5.32□□□□□ -1.56
RNU6-390P-201ENST00000516259 FOXD3Q9UJU5 478 aaPredicted RBP5.32□□□□□ -1.56
RNU6-390P-201ENST00000516259 PHF24Q9UPV7 400 aa5.32□□□□□ -1.56
RNU6-390P-201ENST00000516259 CTSHP09668 335 aa5.31□□□□□ -1.56
RNU6-390P-201ENST00000516259 MAPTP10636 758 aaKnown RBP5.31□□□□□ -1.56
RNU6-390P-201ENST00000516259 CES1P23141 567 aa5.31□□□□□ -1.56
RNU6-390P-201ENST00000516259 ZNF76P36508 570 aa5.31□□□□□ -1.56
RNU6-390P-201ENST00000516259 NEUROD1Q13562 356 aa5.31□□□□□ -1.56
RNU6-390P-201ENST00000516259 PCSK7Q16549 785 aa5.31□□□□□ -1.56
RNU6-390P-201ENST00000516259 CCDC155Q8N6L0 562 aa5.31□□□□□ -1.56
RNU6-390P-201ENST00000516259 C1orf127Q8N9H9 656 aa5.31□□□□□ -1.56
RNU6-390P-201ENST00000516259 SLC43A3Q8NBI5 491 aa5.31□□□□□ -1.56
RNU6-390P-201ENST00000516259 NANOS1Q8WY41 292 aaKnown RBP5.31□□□□□ -1.56
RNU6-390P-201ENST00000516259 SETDB2Q96T68 719 aa5.31□□□□□ -1.56
RNU6-390P-201ENST00000516259 TGIF2Q9GZN2 237 aa5.31□□□□□ -1.56
RNU6-390P-201ENST00000516259 AVENQ9NQS1 362 aaPredicted RBP5.31□□□□□ -1.56
RNU6-390P-201ENST00000516259 PPP4R2Q9NY27 417 aa5.31□□□□□ -1.56
RNU6-390P-201ENST00000516259 TLR7Q9NYK1 1049 aaKnown RBP5.31□□□□□ -1.56
RNU6-390P-201ENST00000516259 CNTN3Q9P232 1028 aa5.31□□□□□ -1.56
RNU6-390P-201ENST00000516259 SALL4Q9UJQ4 1053 aa5.31□□□□□ -1.56
RNU6-390P-201ENST00000516259 PPM1HQ9ULR3 514 aa5.31□□□□□ -1.56
RNU6-390P-201ENST00000516259 BNIP3LO60238 219 aa5.3□□□□□ -1.56
RNU6-390P-201ENST00000516259 ITGA6P23229 1130 aa5.3□□□□□ -1.56
RNU6-390P-201ENST00000516259 RAD51AP2Q09MP3 1159 aa5.3□□□□□ -1.56
RNU6-390P-201ENST00000516259 SFSWAPQ12872 951 aaKnown RBP5.3□□□□□ -1.56
RNU6-390P-201ENST00000516259 TAF1CQ15572 869 aaPredicted RBP5.3□□□□□ -1.56
RNU6-390P-201ENST00000516259 DBN1Q16643 649 aa5.3□□□□□ -1.56
RNU6-390P-201ENST00000516259 USPL1Q5W0Q7 1092 aa5.3□□□□□ -1.56
RNU6-390P-201ENST00000516259 FAM161BQ96MY7 647 aa5.3□□□□□ -1.56
RNU6-390P-201ENST00000516259 NOC4LQ9BVI4 516 aaKnown RBP5.3□□□□□ -1.56
RNU6-390P-201ENST00000516259 OSBPL7Q9BZF2 842 aa5.3□□□□□ -1.56
RNU6-390P-201ENST00000516259 USP20Q9Y2K6 914 aa5.3□□□□□ -1.56
RNU6-390P-201ENST00000516259 PHF20L1A8MW92 1017 aa5.29□□□□□ -1.56
RNU6-390P-201ENST00000516259 EREGO14944 169 aa5.29□□□□□ -1.56
RNU6-390P-201ENST00000516259 ERCC5P28715 1186 aaPredicted RBP5.29□□□□□ -1.56
RNU6-390P-201ENST00000516259 GSTT1P30711 240 aa5.29□□□□□ -1.56
RNU6-390P-201ENST00000516259 NRLP54845 237 aa5.29□□□□□ -1.56
RNU6-390P-201ENST00000516259 SPEM2Q0P670 501 aa5.29□□□□□ -1.56
RNU6-390P-201ENST00000516259 SF3A1Q15459 793 aaKnown RBP5.29□□□□□ -1.56
RNU6-390P-201ENST00000516259 FOXR1Q6PIV2 292 aa5.29□□□□□ -1.56
RNU6-390P-201ENST00000516259 EPS8L3Q8TE67 593 aaKnown RBP5.29□□□□□ -1.56
RNU6-390P-201ENST00000516259 BCO2Q9BYV7 579 aa5.29□□□□□ -1.56
RNU6-390P-201ENST00000516259 RNF19AQ9NV58 838 aa5.29□□□□□ -1.56
RNU6-390P-201ENST00000516259 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.29□□□□□ -1.56
RNU6-390P-201ENST00000516259 A0A1W2PP55 124 aa5.28□□□□□ -1.56
RNU6-390P-201ENST00000516259 KHNYNO15037 678 aaKnown RBP5.28□□□□□ -1.56
RNU6-390P-201ENST00000516259 MMP20O60882 483 aa5.28□□□□□ -1.56
RNU6-390P-201ENST00000516259 SASH3O75995 380 aa5.28□□□□□ -1.56
RNU6-390P-201ENST00000516259 PSAPP07602 524 aa5.28□□□□□ -1.56
RNU6-390P-201ENST00000516259 RLBP1P12271 317 aa5.28□□□□□ -1.56
RNU6-390P-201ENST00000516259 PLAURQ03405 335 aa5.28□□□□□ -1.56
RNU6-390P-201ENST00000516259 HYAL2Q12891 473 aa5.28□□□□□ -1.56
RNU6-390P-201ENST00000516259 RIPOR1Q6ZS17 1223 aa5.28□□□□□ -1.56
RNU6-390P-201ENST00000516259 NT5DC4Q86YG4 428 aa5.28□□□□□ -1.56
RNU6-390P-201ENST00000516259 NPAS3Q8IXF0 933 aa5.28□□□□□ -1.56
RNU6-390P-201ENST00000516259 GLIS3Q8NEA6 775 aa5.28□□□□□ -1.56
RNU6-390P-201ENST00000516259 TRPM4Q8TD43 1214 aa5.28□□□□□ -1.56
RNU6-390P-201ENST00000516259 SREK1Q8WXA9 508 aaKnown RBP5.28□□□□□ -1.56
RNU6-390P-201ENST00000516259 ZNF837Q96EG3 531 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms