RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 TSPY3P0CV98 308 aa18.41■□□□□ 0.54
TRIM41-207ENST00000515223 TSPY8P0CW00 308 aa18.41■□□□□ 0.54
TRIM41-207ENST00000515223 METAP2P50579 478 aaKnown RBP eCLIP18.41■□□□□ 0.54
TRIM41-207ENST00000515223 MICU3Q86XE3 530 aa18.41■□□□□ 0.54
TRIM41-207ENST00000515223 PARP3Q9Y6F1 533 aa18.41■□□□□ 0.54
TRIM41-207ENST00000515223 PODXL2Q9NZ53 605 aa18.41■□□□□ 0.54
TRIM41-207ENST00000515223 ZMYM4Q5VZL5 1548 aa18.41■□□□□ 0.54
TRIM41-207ENST00000515223 YEATS4O95619 227 aa18.41■□□□□ 0.54
TRIM41-207ENST00000515223 ZC3H12CQ9C0D7 883 aaKnown RBP18.41■□□□□ 0.54
TRIM41-207ENST00000515223 TFCP2L1Q9NZI6 479 aa18.41■□□□□ 0.54
TRIM41-207ENST00000515223 PZPP20742 1482 aa18.41■□□□□ 0.54
TRIM41-207ENST00000515223 ZNF804AQ7Z570 1209 aa18.41■□□□□ 0.54
TRIM41-207ENST00000515223 USP37Q86T82 979 aa18.41■□□□□ 0.54
TRIM41-207ENST00000515223 UBXN4Q92575 508 aa18.41■□□□□ 0.54
TRIM41-207ENST00000515223 TMX3Q96JJ7 454 aa18.41■□□□□ 0.54
TRIM41-207ENST00000515223 CA8P35219 290 aa18.4■□□□□ 0.54
TRIM41-207ENST00000515223 PAFAH1B1P43034 410 aa18.4■□□□□ 0.54
TRIM41-207ENST00000515223 TPTE2Q6XPS3 522 aa18.4■□□□□ 0.54
TRIM41-207ENST00000515223 FAM114A1Q8IWE2 563 aa18.4■□□□□ 0.54
TRIM41-207ENST00000515223 CRACR2AQ9BSW2 395 aa18.4■□□□□ 0.54
TRIM41-207ENST00000515223 HMG20BQ9P0W2 317 aa18.4■□□□□ 0.54
TRIM41-207ENST00000515223 HCLS1P14317 486 aaPredicted RBP18.4■□□□□ 0.54
TRIM41-207ENST00000515223 MAP3K9P80192 1104 aa18.4■□□□□ 0.54
TRIM41-207ENST00000515223 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.4■□□□□ 0.54
TRIM41-207ENST00000515223 UTP14AQ9BVJ6 771 aaKnown RBP18.4■□□□□ 0.54
TRIM41-207ENST00000515223 ORC3Q9UBD5 711 aaPredicted RBP18.4■□□□□ 0.54
TRIM41-207ENST00000515223 NIP7Q9Y221 180 aaKnown RBP eCLIP18.4■□□□□ 0.54
TRIM41-207ENST00000515223 PABPN1LA6NDY0 278 aaKnown RBP18.4■□□□□ 0.54
TRIM41-207ENST00000515223 CYP7A1P22680 504 aa18.4■□□□□ 0.54
TRIM41-207ENST00000515223 GNAQP50148 359 aa18.4■□□□□ 0.54
TRIM41-207ENST00000515223 DYDC1Q8WWB3 177 aa18.4■□□□□ 0.54
TRIM41-207ENST00000515223 FANCAO15360 1455 aa18.4■□□□□ 0.54
TRIM41-207ENST00000515223 STX6O43752 255 aa18.4■□□□□ 0.54
TRIM41-207ENST00000515223 KRT23Q9C075 422 aa18.4■□□□□ 0.54
TRIM41-207ENST00000515223 RAPGEF6Q8TEU7 1601 aa18.39■□□□□ 0.54
TRIM41-207ENST00000515223 TMTC2Q8N394 836 aa18.39■□□□□ 0.54
TRIM41-207ENST00000515223 CCDC102AQ96A19 550 aa18.39■□□□□ 0.54
TRIM41-207ENST00000515223 NUP88Q99567 741 aaPredicted RBP18.39■□□□□ 0.54
TRIM41-207ENST00000515223 PLCD4Q9BRC7 762 aa18.39■□□□□ 0.54
TRIM41-207ENST00000515223 DNAJC5BQ9UF47 199 aa18.39■□□□□ 0.54
TRIM41-207ENST00000515223 PRC1O43663 620 aa18.39■□□□□ 0.53
TRIM41-207ENST00000515223 HAND2P61296 217 aa18.39■□□□□ 0.53
TRIM41-207ENST00000515223 ATP2B3Q16720 1220 aa18.39■□□□□ 0.53
TRIM41-207ENST00000515223 RTCBQ9Y3I0 505 aaKnown RBP18.39■□□□□ 0.53
TRIM41-207ENST00000515223 F8W031 263 aaPredicted RBP18.39■□□□□ 0.53
TRIM41-207ENST00000515223 DYNC1I1O14576 645 aa18.39■□□□□ 0.53
TRIM41-207ENST00000515223 KANK3Q6NY19 840 aa18.39■□□□□ 0.53
TRIM41-207ENST00000515223 ESR2Q92731 530 aa18.39■□□□□ 0.53
TRIM41-207ENST00000515223 PUF60Q9UHX1 559 aaKnown RBP18.39■□□□□ 0.53
TRIM41-207ENST00000515223 SLC4A8Q2Y0W8 1093 aa18.38■□□□□ 0.53
TRIM41-207ENST00000515223 SMC5Q8IY18 1101 aa18.38■□□□□ 0.53
TRIM41-207ENST00000515223 WTAPQ15007 396 aa18.38■□□□□ 0.53
TRIM41-207ENST00000515223 CCDC144CPQ8IYA2 1237 aa18.38■□□□□ 0.53
TRIM41-207ENST00000515223 NEK1Q96PY6 1258 aa18.38■□□□□ 0.53
TRIM41-207ENST00000515223 TAOK3Q9H2K8 898 aa18.38■□□□□ 0.53
TRIM41-207ENST00000515223 NUP153P49790 1475 aaKnown RBP18.38■□□□□ 0.53
TRIM41-207ENST00000515223 MCM5P33992 734 aa18.38■□□□□ 0.53
TRIM41-207ENST00000515223 FSIP1Q8NA03 581 aa18.38■□□□□ 0.53
TRIM41-207ENST00000515223 SLC26A6Q9BXS9 759 aa18.38■□□□□ 0.53
TRIM41-207ENST00000515223 CLIP2Q9UDT6 1046 aa18.38■□□□□ 0.53
TRIM41-207ENST00000515223 STAMBPO95630 424 aa18.38■□□□□ 0.53
TRIM41-207ENST00000515223 GIMAP6Q6P9H5 292 aa18.38■□□□□ 0.53
TRIM41-207ENST00000515223 GJB2P29033 226 aa18.37■□□□□ 0.53
TRIM41-207ENST00000515223 NAA16Q6N069 864 aaPredicted RBP18.37■□□□□ 0.53
TRIM41-207ENST00000515223 TNNT1P13805 278 aa18.37■□□□□ 0.53
TRIM41-207ENST00000515223 KIF4BQ2VIQ3 1234 aa18.37■□□□□ 0.53
TRIM41-207ENST00000515223 CCDC113Q9H0I3 377 aa18.37■□□□□ 0.53
TRIM41-207ENST00000515223 EYA3Q99504 573 aa18.37■□□□□ 0.53
TRIM41-207ENST00000515223 TRMT1Q9NXH9 659 aaKnown RBP18.37■□□□□ 0.53
TRIM41-207ENST00000515223 CARD14Q9BXL6 1004 aa18.37■□□□□ 0.53
TRIM41-207ENST00000515223 CNNM2Q9H8M5 875 aa18.37■□□□□ 0.53
TRIM41-207ENST00000515223 PTPN14Q15678 1187 aa18.36■□□□□ 0.53
TRIM41-207ENST00000515223 XAGE3Q8WTP9 111 aa18.36■□□□□ 0.53
TRIM41-207ENST00000515223 IL2RBP14784 551 aa18.36■□□□□ 0.53
TRIM41-207ENST00000515223 ACTN2P35609 894 aa18.36■□□□□ 0.53
TRIM41-207ENST00000515223 MAP9Q49MG5 647 aa18.36■□□□□ 0.53
TRIM41-207ENST00000515223 VEZTQ9HBM0 779 aa18.36■□□□□ 0.53
TRIM41-207ENST00000515223 CCDC172P0C7W6 258 aa18.36■□□□□ 0.53
TRIM41-207ENST00000515223 PLCG2P16885 1265 aa18.36■□□□□ 0.53
TRIM41-207ENST00000515223 LMOD1P29536 600 aaPredicted RBP18.36■□□□□ 0.53
TRIM41-207ENST00000515223 TFIP11Q9UBB9 837 aaKnown RBP18.36■□□□□ 0.53
TRIM41-207ENST00000515223 LAMC3Q9Y6N6 1575 aa18.36■□□□□ 0.53
TRIM41-207ENST00000515223 NCBP1Q09161 790 aaKnown RBP18.36■□□□□ 0.53
TRIM41-207ENST00000515223 DDX19AQ9NUU7 478 aaKnown RBP18.36■□□□□ 0.53
TRIM41-207ENST00000515223 CNPY2Q9Y2B0 182 aa18.36■□□□□ 0.53
TRIM41-207ENST00000515223 IL16Q14005 1332 aa18.36■□□□□ 0.53
TRIM41-207ENST00000515223 ITSN2Q9NZM3 1697 aa18.35■□□□□ 0.53
TRIM41-207ENST00000515223 BMP15O95972 392 aa18.35■□□□□ 0.53
TRIM41-207ENST00000515223 MCM3P25205 808 aa18.35■□□□□ 0.53
TRIM41-207ENST00000515223 COPS6Q7L5N1 327 aa18.35■□□□□ 0.53
TRIM41-207ENST00000515223 ANKRD36BQ8N2N9 1353 aa18.35■□□□□ 0.53
TRIM41-207ENST00000515223 IFFO1Q0D2I5 559 aa18.35■□□□□ 0.53
TRIM41-207ENST00000515223 COL17A1Q9UMD9 1497 aaPredicted RBP18.35■□□□□ 0.53
TRIM41-207ENST00000515223 GRIPAP1Q4V328 841 aa18.35■□□□□ 0.53
TRIM41-207ENST00000515223 IFIT1BQ5T764 474 aaKnown RBP18.35■□□□□ 0.53
TRIM41-207ENST00000515223 MEIS3Q99687 375 aa18.35■□□□□ 0.53
TRIM41-207ENST00000515223 SLC4A4Q9Y6R1 1079 aa18.35■□□□□ 0.53
TRIM41-207ENST00000515223 MAP2K1Q02750 393 aaPredicted RBP18.34■□□□□ 0.53
TRIM41-207ENST00000515223 ZNF608Q9ULD9 1512 aaPredicted RBP18.34■□□□□ 0.53
TRIM41-207ENST00000515223 PIK3C2GO75747 1445 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms