RNA–Protein interactions for RNA: ENST00000513514.2

DDR1-273, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 186 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-273ENST00000513514 CHD4Q14839 1912 aa9.65□□□□□ -0.86
DDR1-273ENST00000513514 PLSCR1O15162 318 aa9.65□□□□□ -0.86
DDR1-273ENST00000513514 NBPF7P0C2Y1 421 aaPredicted RBP9.65□□□□□ -0.86
DDR1-273ENST00000513514 LRRFIP1Q32MZ4 808 aaKnown RBP9.65□□□□□ -0.86
DDR1-273ENST00000513514 NAP1L5Q96NT1 182 aaPredicted RBP9.65□□□□□ -0.86
DDR1-273ENST00000513514 SCAND2PQ9GZW5 306 aaPredicted RBP9.65□□□□□ -0.86
DDR1-273ENST00000513514 RBSNQ9H1K0 784 aa9.65□□□□□ -0.86
DDR1-273ENST00000513514 PHAXQ9H814 394 aaKnown RBP9.65□□□□□ -0.86
DDR1-273ENST00000513514 TMEM63CQ9P1W3 806 aa9.65□□□□□ -0.86
DDR1-273ENST00000513514 USP25Q9UHP3 1055 aa9.65□□□□□ -0.86
DDR1-273ENST00000513514 PAPPAQ13219 1627 aa9.64□□□□□ -0.87
DDR1-273ENST00000513514 GOLGA6L6A8MZA4 724 aa9.64□□□□□ -0.87
DDR1-273ENST00000513514 F13A1P00488 732 aa9.64□□□□□ -0.87
DDR1-273ENST00000513514 EIF2S2P20042 333 aaKnown RBP9.64□□□□□ -0.87
DDR1-273ENST00000513514 HMGN5P82970 282 aaKnown RBP9.64□□□□□ -0.87
DDR1-273ENST00000513514 PKP1Q13835 747 aa9.64□□□□□ -0.87
DDR1-273ENST00000513514 MARCH10Q8NA82 808 aaPredicted RBP9.64□□□□□ -0.87
DDR1-273ENST00000513514 GPR108Q9NPR9 543 aa9.64□□□□□ -0.87
DDR1-273ENST00000513514 COPRSQ9NQ92 184 aa9.64□□□□□ -0.87
DDR1-273ENST00000513514 PDRG1Q9NUG6 133 aa9.64□□□□□ -0.87
DDR1-273ENST00000513514 PALD1Q9ULE6 856 aa9.64□□□□□ -0.87
DDR1-273ENST00000513514 MAP3K2Q9Y2U5 619 aa9.64□□□□□ -0.87
DDR1-273ENST00000513514 SIPA1L3O60292 1781 aaPredicted RBP9.64□□□□□ -0.87
DDR1-273ENST00000513514 ATP5JP18859 108 aa9.63□□□□□ -0.87
DDR1-273ENST00000513514 KRT85P78386 507 aa9.63□□□□□ -0.87
DDR1-273ENST00000513514 SLC15A2Q16348 729 aa9.63□□□□□ -0.87
DDR1-273ENST00000513514 TXNRD1Q16881 649 aa9.63□□□□□ -0.87
DDR1-273ENST00000513514 USPL1Q5W0Q7 1092 aa9.63□□□□□ -0.87
DDR1-273ENST00000513514 USP48Q86UV5 1035 aa9.63□□□□□ -0.87
DDR1-273ENST00000513514 NUTM1Q86Y26 1132 aa9.63□□□□□ -0.87
DDR1-273ENST00000513514 ANKRD24Q8TF21 1146 aa9.63□□□□□ -0.87
DDR1-273ENST00000513514 RAPGEF4Q8WZA2 1011 aa9.63□□□□□ -0.87
DDR1-273ENST00000513514 LLPHQ9BRT6 129 aaKnown RBP9.63□□□□□ -0.87
DDR1-273ENST00000513514 PDCL3Q9H2J4 239 aa9.63□□□□□ -0.87
DDR1-273ENST00000513514 LGR6Q9HBX8 967 aa9.63□□□□□ -0.87
DDR1-273ENST00000513514 IL1RAPL2Q9NP60 686 aa9.63□□□□□ -0.87
DDR1-273ENST00000513514 ATG3Q9NT62 314 aa9.63□□□□□ -0.87
DDR1-273ENST00000513514 STK32BQ9NY57 414 aa9.63□□□□□ -0.87
DDR1-273ENST00000513514 FBXO3Q9UK99 471 aa9.63□□□□□ -0.87
DDR1-273ENST00000513514 THRAP3Q9Y2W1 955 aaKnown RBP9.63□□□□□ -0.87
DDR1-273ENST00000513514 SYCE3A1L190 88 aa9.62□□□□□ -0.87
DDR1-273ENST00000513514 CASTP20810 708 aaKnown RBP9.62□□□□□ -0.87
DDR1-273ENST00000513514 SYT1P21579 422 aa9.62□□□□□ -0.87
DDR1-273ENST00000513514 AK2P54819 239 aa9.62□□□□□ -0.87
DDR1-273ENST00000513514 KIAA2012Q0VF49 1180 aa9.62□□□□□ -0.87
DDR1-273ENST00000513514 DHX8Q14562 1220 aaKnown RBP9.62□□□□□ -0.87
DDR1-273ENST00000513514 DDB1Q16531 1140 aa9.62□□□□□ -0.87
DDR1-273ENST00000513514 RABL6Q3YEC7 729 aaPredicted RBP9.62□□□□□ -0.87
DDR1-273ENST00000513514 ZNF790Q6PG37 636 aa9.62□□□□□ -0.87
DDR1-273ENST00000513514 IFNL2Q8IZJ0 200 aa9.62□□□□□ -0.87
DDR1-273ENST00000513514 LTV1Q96GA3 475 aaPredicted RBP9.62□□□□□ -0.87
DDR1-273ENST00000513514 DCAF5Q96JK2 942 aa9.62□□□□□ -0.87
DDR1-273ENST00000513514 PRIMPOLQ96LW4 560 aa9.62□□□□□ -0.87
DDR1-273ENST00000513514 METTL22Q9BUU2 404 aaPredicted RBP9.62□□□□□ -0.87
DDR1-273ENST00000513514 MTFR1LQ9H019 292 aa9.62□□□□□ -0.87
DDR1-273ENST00000513514 ZSCAN16Q9H4T2 348 aaPredicted RBP9.62□□□□□ -0.87
DDR1-273ENST00000513514 U3KPZ7 1027 aaPredicted RBP9.62□□□□□ -0.87
DDR1-273ENST00000513514 ERBB3P21860 1342 aa9.61□□□□□ -0.87
DDR1-273ENST00000513514 DYNC1I1O14576 645 aa9.61□□□□□ -0.87
DDR1-273ENST00000513514 SNRPA1P09661 255 aaKnown RBP9.61□□□□□ -0.87
DDR1-273ENST00000513514 CCDC192P0DO97 292 aa9.61□□□□□ -0.87
DDR1-273ENST00000513514 TATP17735 454 aaPredicted RBP9.61□□□□□ -0.87
DDR1-273ENST00000513514 GPR162Q16538 588 aa9.61□□□□□ -0.87
DDR1-273ENST00000513514 ZNF827Q17R98 1081 aa9.61□□□□□ -0.87
DDR1-273ENST00000513514 BLOC1S2Q6QNY1 142 aa9.61□□□□□ -0.87
DDR1-273ENST00000513514 CWC27Q6UX04 472 aaKnown RBP9.61□□□□□ -0.87
DDR1-273ENST00000513514 FBXL16Q8N461 479 aa9.61□□□□□ -0.87
DDR1-273ENST00000513514 ARXQ96QS3 562 aa9.61□□□□□ -0.87
DDR1-273ENST00000513514 UPF3BQ9BZI7 483 aaKnown RBP9.61□□□□□ -0.87
DDR1-273ENST00000513514 SLC52A2Q9HAB3 445 aa9.61□□□□□ -0.87
DDR1-273ENST00000513514 DDX19AQ9NUU7 478 aaKnown RBP9.61□□□□□ -0.87
DDR1-273ENST00000513514 GCKRQ14397 625 aa9.6□□□□□ -0.87
DDR1-273ENST00000513514 HSP90AA2PQ14568 343 aaPredicted RBP9.6□□□□□ -0.87
DDR1-273ENST00000513514 CREB3L3Q68CJ9 461 aa9.6□□□□□ -0.87
DDR1-273ENST00000513514 RIC3Q7Z5B4 369 aa9.6□□□□□ -0.87
DDR1-273ENST00000513514 AACSQ86V21 672 aa9.6□□□□□ -0.87
DDR1-273ENST00000513514 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.6□□□□□ -0.87
DDR1-273ENST00000513514 UBE2Q2Q8WVN8 375 aa9.6□□□□□ -0.87
DDR1-273ENST00000513514 JAKMIP1Q96N16 626 aaKnown RBP9.6□□□□□ -0.87
DDR1-273ENST00000513514 CFAP45Q9UL16 551 aa9.6□□□□□ -0.87
DDR1-273ENST00000513514 MED23Q9ULK4 1368 aa9.6□□□□□ -0.87
DDR1-273ENST00000513514 NHSQ6T4R5 1651 aa9.59□□□□□ -0.87
DDR1-273ENST00000513514 NEURL1BA8MQ27 555 aa9.59□□□□□ -0.87
DDR1-273ENST00000513514 CTAGE5O15320 804 aa9.59□□□□□ -0.87
DDR1-273ENST00000513514 KDM4AO75164 1064 aa9.59□□□□□ -0.87
DDR1-273ENST00000513514 RPS6KB1P23443 525 aa9.59□□□□□ -0.87
DDR1-273ENST00000513514 GJB2P29033 226 aa9.59□□□□□ -0.87
DDR1-273ENST00000513514 KCNJ4P48050 445 aa9.59□□□□□ -0.87
DDR1-273ENST00000513514 MPRIPQ6WCQ1 1025 aa9.59□□□□□ -0.87
DDR1-273ENST00000513514 ANKRD13DQ6ZTN6 518 aa9.59□□□□□ -0.87
DDR1-273ENST00000513514 TOM1L2Q6ZVM7 507 aa9.59□□□□□ -0.87
DDR1-273ENST00000513514 NLGN2Q8NFZ4 835 aa9.59□□□□□ -0.87
DDR1-273ENST00000513514 NECTIN2Q92692 538 aa9.59□□□□□ -0.87
DDR1-273ENST00000513514 FMNL2Q96PY5 1086 aa9.59□□□□□ -0.87
DDR1-273ENST00000513514 MTMR6Q9Y217 621 aa9.59□□□□□ -0.87
DDR1-273ENST00000513514 RBM8AQ9Y5S9 174 aaKnown RBP9.59□□□□□ -0.87
DDR1-273ENST00000513514 COL18A1P39060 1754 aa9.59□□□□□ -0.87
DDR1-273ENST00000513514 ABCC12Q96J65 1359 aa9.59□□□□□ -0.87
DDR1-273ENST00000513514 BCL9O00512 1426 aa9.58□□□□□ -0.88
DDR1-273ENST00000513514 SASH1O94885 1247 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms